RNA–Protein interactions for RNA: ENST00000520534.5

TCEA1-206, Transcript of transcription elongation factor A1, humanhuman

TSL 2 BASIC

Gene TCEA1, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-206ENST00000520534 AEBP2Q6ZN18 517 aaPredicted RBP27.94■■■□□ 2.06
TCEA1-206ENST00000520534 CHIC1Q5VXU3 224 aa27.8■■■□□ 2.04
TCEA1-206ENST00000520534 PHF23Q9BUL5 403 aaPredicted RBP24.43■■□□□ 1.5
TCEA1-206ENST00000520534 SENP3Q9H4L4 574 aaPredicted RBP23.76■■□□□ 1.39
TCEA1-206ENST00000520534 PLPPR3Q6T4P5 718 aa22.81■■□□□ 1.24
TCEA1-206ENST00000520534 NISCHQ9Y2I1 1504 aa22.11■■□□□ 1.13
TCEA1-206ENST00000520534 FOXD1Q16676 465 aa21.91■■□□□ 1.1
TCEA1-206ENST00000520534 ADRA2BP18089 450 aa21.4■■□□□ 1.02
TCEA1-206ENST00000520534 PPP6R1Q9UPN7 881 aa21.39■■□□□ 1.01
TCEA1-206ENST00000520534 PIAS4Q8N2W9 510 aaPredicted RBP20.8■□□□□ 0.92
TCEA1-206ENST00000520534 KCNA4P22459 653 aa20.22■□□□□ 0.83
TCEA1-206ENST00000520534 ABCC9O60706 1549 aa20.2■□□□□ 0.82
TCEA1-206ENST00000520534 MSH5O43196 834 aa20.12■□□□□ 0.81
TCEA1-206ENST00000520534 PPP4R3CPQ6ZMV5 832 aa20.11■□□□□ 0.81
TCEA1-206ENST00000520534 CCDC180Q9P1Z9 1646 aa19.91■□□□□ 0.78
TCEA1-206ENST00000520534 NCBP3Q53F19 620 aaKnown RBP19.79■□□□□ 0.76
TCEA1-206ENST00000520534 SCAF1Q9H7N4 1312 aaKnown RBP19.73■□□□□ 0.75
TCEA1-206ENST00000520534 EHMT2Q96KQ7 1210 aa19.58■□□□□ 0.72
TCEA1-206ENST00000520534 CNKSR2Q8WXI2 1034 aa19.49■□□□□ 0.71
TCEA1-206ENST00000520534 NPM3O75607 178 aaKnown RBP19.41■□□□□ 0.7
TCEA1-206ENST00000520534 SLC4A1APQ9BWU0 796 aaKnown RBP19.29■□□□□ 0.68
TCEA1-206ENST00000520534 MAPK8IP2Q13387 824 aaPredicted RBP19.26■□□□□ 0.67
TCEA1-206ENST00000520534 CSRNP3Q8WYN3 585 aa19.18■□□□□ 0.66
TCEA1-206ENST00000520534 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
TCEA1-206ENST00000520534 RB1CC1Q8TDY2 1594 aa19.09■□□□□ 0.65
TCEA1-206ENST00000520534 DMRT2Q9Y5R5 561 aa19.01■□□□□ 0.63
TCEA1-206ENST00000520534 RNF216Q9NWF9 866 aaPredicted RBP19■□□□□ 0.63
TCEA1-206ENST00000520534 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.61
TCEA1-206ENST00000520534 NACADO15069 1562 aa18.89■□□□□ 0.61
TCEA1-206ENST00000520534 HOXD11P31277 338 aaPredicted RBP18.8■□□□□ 0.6
TCEA1-206ENST00000520534 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
TCEA1-206ENST00000520534 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
TCEA1-206ENST00000520534 ZBTB22O15209 634 aa18.7■□□□□ 0.58
TCEA1-206ENST00000520534 UNC13AQ9UPW8 1703 aa18.66■□□□□ 0.58
TCEA1-206ENST00000520534 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
TCEA1-206ENST00000520534 MYO15BQ96JP2 1530 aa18.51■□□□□ 0.55
TCEA1-206ENST00000520534 FOXD4L1Q9NU39 408 aa18.45■□□□□ 0.54
TCEA1-206ENST00000520534 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
TCEA1-206ENST00000520534 SHROOM4Q9ULL8 1493 aa18.22■□□□□ 0.51
TCEA1-206ENST00000520534 CECR2Q9BXF3 1484 aa18.2■□□□□ 0.5
TCEA1-206ENST00000520534 CC2D2AQ9P2K1 1620 aa18.2■□□□□ 0.5
TCEA1-206ENST00000520534 DCAF1Q9Y4B6 1507 aa18.2■□□□□ 0.5
TCEA1-206ENST00000520534 SLC4A2P04920 1241 aa18.2■□□□□ 0.5
TCEA1-206ENST00000520534 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
TCEA1-206ENST00000520534 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
TCEA1-206ENST00000520534 EIF4G1Q04637 1599 aaKnown RBP18.1■□□□□ 0.49
TCEA1-206ENST00000520534 MYCNP04198 464 aaPredicted RBP17.99■□□□□ 0.47
TCEA1-206ENST00000520534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.9■□□□□ 0.463e-7■■■■□ 23.7
TCEA1-206ENST00000520534 ATXN8OSP0DMR3 200 aa17.82■□□□□ 0.44
TCEA1-206ENST00000520534 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
TCEA1-206ENST00000520534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.68■□□□□ 0.42
TCEA1-206ENST00000520534 HNRNPUL2Q1KMD3 747 aaKnown RBP17.68■□□□□ 0.42
TCEA1-206ENST00000520534 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
TCEA1-206ENST00000520534 SAMD1Q6SPF0 538 aaPredicted RBP17.61■□□□□ 0.41
TCEA1-206ENST00000520534 ERCC6Q03468 1493 aa17.48■□□□□ 0.39
TCEA1-206ENST00000520534 CUX2O14529 1486 aa17.45■□□□□ 0.38
TCEA1-206ENST00000520534 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
TCEA1-206ENST00000520534 APLP2Q06481 763 aa17.42■□□□□ 0.38
TCEA1-206ENST00000520534 ATAD2BQ9ULI0 1458 aa17.37■□□□□ 0.37
TCEA1-206ENST00000520534 ATF5Q9Y2D1 282 aaPredicted RBP17.35■□□□□ 0.37
TCEA1-206ENST00000520534 SMARCA2P51531 1590 aa17.31■□□□□ 0.36
TCEA1-206ENST00000520534 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
TCEA1-206ENST00000520534 HMGXB3Q12766 1538 aa17.28■□□□□ 0.36
TCEA1-206ENST00000520534 NESP48681 1621 aa17.27■□□□□ 0.36
TCEA1-206ENST00000520534 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
TCEA1-206ENST00000520534 BAZ1BQ9UIG0 1483 aaKnown RBP17.21■□□□□ 0.35
TCEA1-206ENST00000520534 BAZ1AQ9NRL2 1556 aaPredicted RBP17.18■□□□□ 0.34
TCEA1-206ENST00000520534 FKBP8Q14318 412 aa17.15■□□□□ 0.34
TCEA1-206ENST00000520534 ZNF219Q9P2Y4 722 aaPredicted RBP17.12■□□□□ 0.33
TCEA1-206ENST00000520534 C1QBPQ07021 282 aaKnown RBP17.11■□□□□ 0.33
TCEA1-206ENST00000520534 THOC2Q8NI27 1593 aaKnown RBP17.11■□□□□ 0.33
TCEA1-206ENST00000520534 PEG3Q9GZU2 1588 aa17.09■□□□□ 0.33
TCEA1-206ENST00000520534 LAMC3Q9Y6N6 1575 aa17.09■□□□□ 0.33
TCEA1-206ENST00000520534 MROH2BQ7Z745 1585 aa17.04■□□□□ 0.32
TCEA1-206ENST00000520534 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
TCEA1-206ENST00000520534 PDS5BQ9NTI5 1447 aa17.03■□□□□ 0.32
TCEA1-206ENST00000520534 RTN4Q9NQC3 1192 aaKnown RBP17.02■□□□□ 0.32
TCEA1-206ENST00000520534 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
TCEA1-206ENST00000520534 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
TCEA1-206ENST00000520534 AMER1Q5JTC6 1135 aaPredicted RBP16.94■□□□□ 0.3
TCEA1-206ENST00000520534 CAPN15O75808 1086 aa16.93■□□□□ 0.3
TCEA1-206ENST00000520534 TRIM41Q8WV44 630 aa16.93■□□□□ 0.3
TCEA1-206ENST00000520534 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
TCEA1-206ENST00000520534 MRC2Q9UBG0 1479 aa16.87■□□□□ 0.29
TCEA1-206ENST00000520534 WIZO95785 1651 aa16.84■□□□□ 0.29
TCEA1-206ENST00000520534 WDR62O43379 1518 aa16.82■□□□□ 0.28
TCEA1-206ENST00000520534 POLA2Q14181 598 aa16.78■□□□□ 0.28
TCEA1-206ENST00000520534 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.28
TCEA1-206ENST00000520534 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
TCEA1-206ENST00000520534 FBLN2P98095 1184 aa16.72■□□□□ 0.27
TCEA1-206ENST00000520534 OSCARQ8IYS5 282 aa16.67■□□□□ 0.26
TCEA1-206ENST00000520534 CFTRP13569 1480 aa16.67■□□□□ 0.26
TCEA1-206ENST00000520534 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
TCEA1-206ENST00000520534 ZBTB12Q9Y330 459 aaPredicted RBP16.65■□□□□ 0.26
TCEA1-206ENST00000520534 RSF1Q96T23 1441 aaPredicted RBP16.61■□□□□ 0.25
TCEA1-206ENST00000520534 ABCB7O75027 752 aa16.6■□□□□ 0.25
TCEA1-206ENST00000520534 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
TCEA1-206ENST00000520534 TOP2AP11388 1531 aaKnown RBP16.59■□□□□ 0.25
TCEA1-206ENST00000520534 SPDYE4A6NLX3 237 aa16.54■□□□□ 0.24
TCEA1-206ENST00000520534 DSG3P32926 999 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms