Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 AC080080.1-201ENST00000625121 2420 ntBASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 AL645608.8-201ENST00000606034 2086 ntBASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC197Q8NCU1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 AC116351.2-201ENST00000606540 1585 ntBASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC197Q8NCU1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC197Q8NCU1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms