RNA–Protein interactions for RNA: ENST00000426635.6

LINC00472-203, long intergenic non-protein coding RNA 472, humanhuman

TSL 2 BASIC

Gene LINC00472, Length 2,958 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-203ENST00000426635 NISCHQ9Y2I1 1504 aa30.61■■■□□ 2.49
LINC00472-203ENST00000426635 HRCP23327 699 aa29■■■□□ 2.23
LINC00472-203ENST00000426635 PELP1Q8IZL8 1130 aaKnown RBP28.59■■■□□ 2.17
LINC00472-203ENST00000426635 PPARGC1BQ86YN6 1023 aaKnown RBP28.52■■■□□ 2.16
LINC00472-203ENST00000426635 PCGF6Q9BYE7 350 aa28.29■■■□□ 2.12
LINC00472-203ENST00000426635 SUPT5HO00267 1087 aaKnown RBP27.89■■■□□ 2.06
LINC00472-203ENST00000426635 SHROOM4Q9ULL8 1493 aa27.8■■■□□ 2.04
LINC00472-203ENST00000426635 MYO15BQ96JP2 1530 aa27.79■■■□□ 2.04
LINC00472-203ENST00000426635 SCAF1Q9H7N4 1312 aaKnown RBP27.75■■■□□ 2.03
LINC00472-203ENST00000426635 MYT1Q01538 1121 aa27.57■■■□□ 2
LINC00472-203ENST00000426635 CHIC1Q5VXU3 224 aa27.49■■□□□ 1.99
LINC00472-203ENST00000426635 DCAF1Q9Y4B6 1507 aa27.2■■□□□ 1.94
LINC00472-203ENST00000426635 TRIM26Q12899 539 aaPredicted RBP27.15■■□□□ 1.94
LINC00472-203ENST00000426635 ZEB1P37275 1124 aaPredicted RBP27.03■■□□□ 1.92
LINC00472-203ENST00000426635 LOC105371045A0A1W2PR82 267 aa27.02■■□□□ 1.92
LINC00472-203ENST00000426635 CCDC180Q9P1Z9 1646 aa26.96■■□□□ 1.91
LINC00472-203ENST00000426635 ACIN1Q9UKV3 1341 aaKnown RBP26.89■■□□□ 1.9
LINC00472-203ENST00000426635 NEUROD1Q13562 356 aa26.84■■□□□ 1.89
LINC00472-203ENST00000426635 GTF3C3Q9Y5Q9 886 aa26.76■■□□□ 1.88
LINC00472-203ENST00000426635 CENPBP07199 599 aaPredicted RBP26.48■■□□□ 1.83
LINC00472-203ENST00000426635 DIEXFQ68CQ4 756 aaKnown RBP26.22■■□□□ 1.79
LINC00472-203ENST00000426635 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
LINC00472-203ENST00000426635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.06■■□□□ 1.76
LINC00472-203ENST00000426635 CCER1Q8TC90 406 aaPredicted RBP26.01■■□□□ 1.75
LINC00472-203ENST00000426635 YTHDC1Q96MU7 727 aaKnown RBP25.97■■□□□ 1.75
LINC00472-203ENST00000426635 TTBK1Q5TCY1 1321 aaPredicted RBP25.94■■□□□ 1.74
LINC00472-203ENST00000426635 BCL11AQ9H165 835 aa25.91■■□□□ 1.74
LINC00472-203ENST00000426635 EHMT2Q96KQ7 1210 aa25.86■■□□□ 1.73
LINC00472-203ENST00000426635 FAM9AQ8IZU1 332 aaPredicted RBP25.84■■□□□ 1.73
LINC00472-203ENST00000426635 DCAF8L2P0C7V8 631 aa25.81■■□□□ 1.72
LINC00472-203ENST00000426635 TRIM41Q8WV44 630 aa25.69■■□□□ 1.7
LINC00472-203ENST00000426635 ANP32EQ9BTT0 268 aa25.6■■□□□ 1.69
LINC00472-203ENST00000426635 ZNF316A6NFI3 1004 aaPredicted RBP25.56■■□□□ 1.68
LINC00472-203ENST00000426635 MIER1Q8N108 512 aa25.52■■□□□ 1.68
LINC00472-203ENST00000426635 CSRNP3Q8WYN3 585 aa25.4■■□□□ 1.66
LINC00472-203ENST00000426635 TSHZ2Q9NRE2 1034 aa25.33■■□□□ 1.65
LINC00472-203ENST00000426635 SUPT16HQ9Y5B9 1047 aaKnown RBP25.31■■□□□ 1.64
LINC00472-203ENST00000426635 PRKCSHP14314 528 aaPredicted RBP25.15■■□□□ 1.62
LINC00472-203ENST00000426635 CLSPNQ9HAW4 1339 aa25.08■■□□□ 1.61
LINC00472-203ENST00000426635 RB1CC1Q8TDY2 1594 aa24.9■■□□□ 1.58
LINC00472-203ENST00000426635 ABCC9O60706 1549 aa24.89■■□□□ 1.58
LINC00472-203ENST00000426635 RSF1Q96T23 1441 aaPredicted RBP24.88■■□□□ 1.57
LINC00472-203ENST00000426635 BCANQ96GW7 911 aa24.84■■□□□ 1.57
LINC00472-203ENST00000426635 HNRNPUL2Q1KMD3 747 aaKnown RBP24.72■■□□□ 1.55
LINC00472-203ENST00000426635 WRNQ14191 1432 aaPredicted RBP eCLIP24.71■■□□□ 1.55
LINC00472-203ENST00000426635 RBM19Q9Y4C8 960 aaKnown RBP24.7■■□□□ 1.55
LINC00472-203ENST00000426635 FKBP8Q14318 412 aa24.6■■□□□ 1.53
LINC00472-203ENST00000426635 CEP162Q5TB80 1403 aa24.58■■□□□ 1.53
LINC00472-203ENST00000426635 MSH5O43196 834 aa24.54■■□□□ 1.52
LINC00472-203ENST00000426635 ERICH6Q7L0X2 663 aa24.51■■□□□ 1.51
LINC00472-203ENST00000426635 KCNH8Q96L42 1107 aa24.48■■□□□ 1.51
LINC00472-203ENST00000426635 ITGAEP38570 1179 aa24.45■■□□□ 1.5
LINC00472-203ENST00000426635 UBTFP17480 764 aaKnown RBP24.34■■□□□ 1.49
LINC00472-203ENST00000426635 NEFLP07196 543 aa24.33■■□□□ 1.49
LINC00472-203ENST00000426635 TNIKQ9UKE5 1360 aa24.32■■□□□ 1.48
LINC00472-203ENST00000426635 ANO8Q9HCE9 1232 aaPredicted RBP24.31■■□□□ 1.48
LINC00472-203ENST00000426635 SCRIBQ14160 1630 aa24.27■■□□□ 1.48
LINC00472-203ENST00000426635 DEKP35659 375 aaKnown RBP24.25■■□□□ 1.47
LINC00472-203ENST00000426635 FANCIQ9NVI1 1328 aa24.18■■□□□ 1.46
LINC00472-203ENST00000426635 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
LINC00472-203ENST00000426635 CCDC88BA6NC98 1476 aa24.16■■□□□ 1.46
LINC00472-203ENST00000426635 APLP2Q06481 763 aa24.16■■□□□ 1.46
LINC00472-203ENST00000426635 SOGA1O94964 1423 aa24.14■■□□□ 1.45
LINC00472-203ENST00000426635 MYT1LQ9UL68 1186 aa24.11■■□□□ 1.45
LINC00472-203ENST00000426635 DHX57Q6P158 1386 aaKnown RBP24.11■■□□□ 1.45
LINC00472-203ENST00000426635 TRIM52Q96A61 297 aa24.08■■□□□ 1.44
LINC00472-203ENST00000426635 CECR2Q9BXF3 1484 aa24.06■■□□□ 1.44
LINC00472-203ENST00000426635 MROH2BQ7Z745 1585 aa24.03■■□□□ 1.44
LINC00472-203ENST00000426635 CDK11AQ9UQ88 783 aaPredicted RBP24.03■■□□□ 1.44
LINC00472-203ENST00000426635 SALL2Q9Y467 1007 aaPredicted RBP24.03■■□□□ 1.44
LINC00472-203ENST00000426635 WIZO95785 1651 aa24.02■■□□□ 1.44
LINC00472-203ENST00000426635 EIF4G1Q04637 1599 aaKnown RBP24■■□□□ 1.43
LINC00472-203ENST00000426635 RUSC2Q8N2Y8 1516 aa23.99■■□□□ 1.43
LINC00472-203ENST00000426635 DDX10Q13206 875 aaKnown RBP23.98■■□□□ 1.43
LINC00472-203ENST00000426635 CCDC136Q96JN2 1154 aa23.94■■□□□ 1.42
LINC00472-203ENST00000426635 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
LINC00472-203ENST00000426635 NBR1Q14596 966 aa23.93■■□□□ 1.42
LINC00472-203ENST00000426635 IRX6P78412 446 aaPredicted RBP23.92■■□□□ 1.42
LINC00472-203ENST00000426635 CLIP1P30622 1438 aa23.85■■□□□ 1.41
LINC00472-203ENST00000426635 RANGAP1P46060 587 aaPredicted RBP23.84■■□□□ 1.41
LINC00472-203ENST00000426635 EEA1Q15075 1411 aa23.84■■□□□ 1.41
LINC00472-203ENST00000426635 VPS8Q8N3P4 1428 aa23.81■■□□□ 1.4
LINC00472-203ENST00000426635 ERICH6BQ5W0A0 696 aa23.81■■□□□ 1.4
LINC00472-203ENST00000426635 RTN4Q9NQC3 1192 aaKnown RBP23.76■■□□□ 1.39
LINC00472-203ENST00000426635 NOP58Q9Y2X3 529 aaKnown RBP23.74■■□□□ 1.39
LINC00472-203ENST00000426635 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.73■■□□□ 1.39
LINC00472-203ENST00000426635 BAZ1AQ9NRL2 1556 aaPredicted RBP23.73■■□□□ 1.39
LINC00472-203ENST00000426635 IL27Q8NEV9 243 aa23.73■■□□□ 1.39
LINC00472-203ENST00000426635 PAK3O75914 559 aaPredicted RBP23.72■■□□□ 1.39
LINC00472-203ENST00000426635 ANP32CO43423 234 aa23.71■■□□□ 1.39
LINC00472-203ENST00000426635 CCER2I3L3R5 266 aa23.7■■□□□ 1.39
LINC00472-203ENST00000426635 HIRIP3Q9BW71 556 aaPredicted RBP23.7■■□□□ 1.38
LINC00472-203ENST00000426635 PPP1R15AO75807 674 aaPredicted RBP23.69■■□□□ 1.38
LINC00472-203ENST00000426635 NACADO15069 1562 aa23.69■■□□□ 1.38
LINC00472-203ENST00000426635 UBE2Q2Q8WVN8 375 aa23.63■■□□□ 1.37
LINC00472-203ENST00000426635 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
LINC00472-203ENST00000426635 RTL5Q5HYW3 569 aaPredicted RBP23.61■■□□□ 1.37
LINC00472-203ENST00000426635 HNRNPUQ00839 825 aaKnown RBP eCLIP23.6■■□□□ 1.37
LINC00472-203ENST00000426635 PPP4R2Q9NY27 417 aa23.58■■□□□ 1.37
LINC00472-203ENST00000426635 B4GALNT3Q6L9W6 998 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms