Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DRB4X5D2U9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.27□□□□□ -0.12
HLA-DRB4X5D2U9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 AC142381.4-202ENST00000563973 229 ntBASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 AL445675.2-201ENST00000620291 557 ntBASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 AC141586.3-201ENST00000562166 1838 ntBASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DRB4X5D2U9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 TEX21P-204ENST00000641479 1693 ntBASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DRB4X5D2U9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 LINC01465-201ENST00000408887 1940 ntBASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 AL135905.2-201ENST00000584934 1404 ntBASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms