RNA–Protein interactions for RNA: ENST00000495093.1

ROPN1-209, Transcript of rhophilin associated tail protein 1, human

TSL 1 (best) BASIC

Gene ROPN1, Length 1,376 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ROPN1-209	ENST00000495093	NISCH	Q9Y2I1	1504 aa		47.77	■■■■■ 5.24
ROPN1-209	ENST00000495093	CCDC180	Q9P1Z9	1646 aa		42.44	■■■■■ 4.38
ROPN1-209	ENST00000495093	ABCC9	O60706	1549 aa		41.83	■■■■■ 4.29
ROPN1-209	ENST00000495093	DCAF8L2	P0C7V8	631 aa		40.1	■■■■■ 4.01
ROPN1-209	ENST00000495093	RB1CC1	Q8TDY2	1594 aa		40.06	■■■■■ 4
ROPN1-209	ENST00000495093	NACAD	O15069	1562 aa		39.98	■■■■□ 3.99
ROPN1-209	ENST00000495093	ZCCHC6	Q5VYS8	1495 aa	Known RBP	39.76	■■■■□ 3.96
ROPN1-209	ENST00000495093	MYO15B	Q96JP2	1530 aa		39.66	■■■■□ 3.94
ROPN1-209	ENST00000495093	DCAF1	Q9Y4B6	1507 aa		39.46	■■■■□ 3.91
ROPN1-209	ENST00000495093	UNC13A	Q9UPW8	1703 aa		39.13	■■■■□ 3.85
ROPN1-209	ENST00000495093	PABPN1	Q86U42	306 aa	Known RBP eCLIP	39.12	■■■■□ 3.85
ROPN1-209	ENST00000495093	BICRA	Q9NZM4	1560 aa		38.91	■■■■□ 3.82
ROPN1-209	ENST00000495093	SCRIB	Q14160	1630 aa		38.83	■■■■□ 3.81
ROPN1-209	ENST00000495093	DNAJC5B	Q9UF47	199 aa		38.58	■■■■□ 3.77
ROPN1-209	ENST00000495093	SHROOM4	Q9ULL8	1493 aa		38.39	■■■■□ 3.74
ROPN1-209	ENST00000495093	EIF4G1	Q04637	1599 aa	Known RBP	37.89	■■■■□ 3.66
ROPN1-209	ENST00000495093	CC2D2A	Q9P2K1	1620 aa		37.77	■■■■□ 3.64
ROPN1-209	ENST00000495093	CECR2	Q9BXF3	1484 aa		37.57	■■■■□ 3.6
ROPN1-209	ENST00000495093	SMARCA4	P51532	1647 aa		37.08	■■■■□ 3.53
ROPN1-209	ENST00000495093	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	37.01	■■■■□ 3.51
ROPN1-209	ENST00000495093	ATAD2B	Q9ULI0	1458 aa		36.96	■■■■□ 3.51
ROPN1-209	ENST00000495093	NCAPD3	P42695	1498 aa		36.94	■■■■□ 3.5
ROPN1-209	ENST00000495093	SMARCA2	P51531	1590 aa		36.85	■■■■□ 3.49
ROPN1-209	ENST00000495093	MROH2B	Q7Z745	1585 aa		36.85	■■■■□ 3.49
ROPN1-209	ENST00000495093	HMGXB3	Q12766	1538 aa		36.7	■■■■□ 3.47
ROPN1-209	ENST00000495093	PEG3	Q9GZU2	1588 aa		36.69	■■■■□ 3.46
ROPN1-209	ENST00000495093	BAZ1B	Q9UIG0	1483 aa	Known RBP	36.64	■■■■□ 3.46
ROPN1-209	ENST00000495093	WIZ	O95785	1651 aa		36.43	■■■■□ 3.42
ROPN1-209	ENST00000495093	RSF1	Q96T23	1441 aa	Predicted RBP	36.38	■■■■□ 3.41
ROPN1-209	ENST00000495093	NES	P48681	1621 aa		36.16	■■■■□ 3.38
ROPN1-209	ENST00000495093	ERCC6	Q03468	1493 aa		36.03	■■■■□ 3.36
ROPN1-209	ENST00000495093	TOP2A	P11388	1531 aa	Known RBP	36	■■■■□ 3.35
ROPN1-209	ENST00000495093	LAMC3	Q9Y6N6	1575 aa		35.94	■■■■□ 3.34
ROPN1-209	ENST00000495093	CADPS	Q9ULU8	1353 aa		35.88	■■■■□ 3.33
ROPN1-209	ENST00000495093	PDS5B	Q9NTI5	1447 aa		35.75	■■■■□ 3.31
ROPN1-209	ENST00000495093	CUX2	O14529	1486 aa		35.65	■■■■□ 3.3
ROPN1-209	ENST00000495093	KIF21A	Q7Z4S6	1674 aa		35.64	■■■■□ 3.3
ROPN1-209	ENST00000495093	CCDC88B	A6NC98	1476 aa		35.64	■■■■□ 3.3
ROPN1-209	ENST00000495093	CFTR	P13569	1480 aa		35.61	■■■■□ 3.29
ROPN1-209	ENST00000495093	THOC2	Q8NI27	1593 aa	Known RBP	35.57	■■■■□ 3.28
ROPN1-209	ENST00000495093	FANCD2	Q9BXW9	1451 aa		35.47	■■■■□ 3.27
ROPN1-209	ENST00000495093	SUPT5H	O00267	1087 aa	Known RBP	35.43	■■■■□ 3.26
ROPN1-209	ENST00000495093	CEP164	Q9UPV0	1460 aa		35.41	■■■■□ 3.26
ROPN1-209	ENST00000495093	MRC2	Q9UBG0	1479 aa		35.4	■■■■□ 3.26
ROPN1-209	ENST00000495093	WDR62	O43379	1518 aa		35.27	■■■■□ 3.24
ROPN1-209	ENST00000495093	PRDM2	Q13029	1718 aa		35.21	■■■■□ 3.23
ROPN1-209	ENST00000495093	URB2	Q14146	1524 aa	Known RBP	35.13	■■■■□ 3.21
ROPN1-209	ENST00000495093	TOPBP1	Q92547	1522 aa		34.87	■■■■□ 3.17
ROPN1-209	ENST00000495093	DNAJC5	Q9H3Z4	198 aa		34.81	■■■■□ 3.16
ROPN1-209	ENST00000495093	ABCC8	Q09428	1581 aa		34.8	■■■■□ 3.16
ROPN1-209	ENST00000495093	DNMBP	Q6XZF7	1577 aa		34.79	■■■■□ 3.16
ROPN1-209	ENST00000495093	IFT140	Q96RY7	1462 aa		34.67	■■■■□ 3.14
ROPN1-209	ENST00000495093	ZNF608	Q9ULD9	1512 aa	Predicted RBP	34.59	■■■■□ 3.13
ROPN1-209	ENST00000495093	POLA1	P09884	1462 aa	Predicted RBP	34.58	■■■■□ 3.13
ROPN1-209	ENST00000495093	CUX1	P39880	1505 aa		34.57	■■■■□ 3.12
ROPN1-209	ENST00000495093	FGD5	Q6ZNL6	1462 aa		34.48	■■■■□ 3.11
ROPN1-209	ENST00000495093	TARBP1	Q13395	1621 aa	Known RBP	34.48	■■■■□ 3.11
ROPN1-209	ENST00000495093	RAD54L2	Q9Y4B4	1467 aa		34.47	■■■■□ 3.11
ROPN1-209	ENST00000495093	SOGA1	O94964	1423 aa		34.45	■■■■□ 3.11
ROPN1-209	ENST00000495093	EIF4G3	O43432	1585 aa	Known RBP	34.38	■■■■□ 3.09
ROPN1-209	ENST00000495093	AQR	O60306	1485 aa	Known RBP eCLIP	34.38	■■■■□ 3.09
ROPN1-209	ENST00000495093	TDRD9	Q8NDG6	1382 aa	Known RBP	34.32	■■■■□ 3.08
ROPN1-209	ENST00000495093	WRN	Q14191	1432 aa	Predicted RBP eCLIP	34.3	■■■■□ 3.08
ROPN1-209	ENST00000495093	OSCAR	Q8IYS5	282 aa		34.22	■■■■□ 3.07
ROPN1-209	ENST00000495093	SYNJ1	O43426	1573 aa		34.21	■■■■□ 3.07
ROPN1-209	ENST00000495093	TOP2B	Q02880	1626 aa		34.19	■■■■□ 3.06
ROPN1-209	ENST00000495093	BIVM-ERCC5	R4GMW8	1640 aa		34.17	■■■■□ 3.06
ROPN1-209	ENST00000495093	WDR97	A6NE52	1622 aa		34.12	■■■■□ 3.05
ROPN1-209	ENST00000495093	ABCA10	Q8WWZ4	1543 aa		34.1	■■■■□ 3.05
ROPN1-209	ENST00000495093	SNAPC4	Q5SXM2	1469 aa		34.04	■■■■□ 3.04
ROPN1-209	ENST00000495093	GRIN2B	Q13224	1484 aa		34.03	■■■■□ 3.04
ROPN1-209	ENST00000495093	GAPVD1	Q14C86	1478 aa		34.03	■■■■□ 3.04
ROPN1-209	ENST00000495093	FBLN2	P98095	1184 aa		34.02	■■■■□ 3.04
ROPN1-209	ENST00000495093	ABCA5	Q8WWZ7	1642 aa		33.96	■■■■□ 3.03
ROPN1-209	ENST00000495093	CHD1	O14646	1710 aa		33.95	■■■■□ 3.03
ROPN1-209	ENST00000495093	MAGI1	Q96QZ7	1491 aa	Predicted RBP	33.94	■■■■□ 3.02
ROPN1-209	ENST00000495093	PBRM1	Q86U86	1689 aa		33.9	■■■■□ 3.02
ROPN1-209	ENST00000495093	CHMP7	Q8WUX9	453 aa	Predicted RBP	33.88	■■■■□ 3.01
ROPN1-209	ENST00000495093	SYNJ2	O15056	1496 aa		33.83	■■■■□ 3.01
ROPN1-209	ENST00000495093	ERICH3	Q5RHP9	1530 aa		33.68	■■■□□ 2.98
ROPN1-209	ENST00000495093	TRIM41	Q8WV44	630 aa		33.67	■■■□□ 2.98
ROPN1-209	ENST00000495093	ADAMTS12	P58397	1594 aa		33.67	■■■□□ 2.98
ROPN1-209	ENST00000495093	RIMBP3C	A6NJZ7	1639 aa		33.64	■■■□□ 2.98
ROPN1-209	ENST00000495093	RIMBP3B	A6NNM3	1639 aa		33.64	■■■□□ 2.98
ROPN1-209	ENST00000495093	RIMBP3	Q9UFD9	1639 aa		33.64	■■■□□ 2.98
ROPN1-209	ENST00000495093	ARHGEF11	O15085	1522 aa		33.64	■■■□□ 2.98
ROPN1-209	ENST00000495093	FHAD1	B1AJZ9	1412 aa		33.63	■■■□□ 2.97
ROPN1-209	ENST00000495093	CLASP1	Q7Z460	1538 aa		33.62	■■■□□ 2.97
ROPN1-209	ENST00000495093	GRIN2A	Q12879	1464 aa		33.6	■■■□□ 2.97
ROPN1-209	ENST00000495093	KIF27	Q86VH2	1401 aa		33.58	■■■□□ 2.97
ROPN1-209	ENST00000495093	IGF1R	P08069	1367 aa		33.5	■■■□□ 2.95
ROPN1-209	ENST00000495093	NUP160	Q12769	1436 aa		33.46	■■■□□ 2.95
ROPN1-209	ENST00000495093	CEP170	Q5SW79	1584 aa		33.44	■■■□□ 2.94
ROPN1-209	ENST00000495093	CYB5RL	Q6IPT4	315 aa		33.4	■■■□□ 2.94
ROPN1-209	ENST00000495093	ARAP1	Q96P48	1450 aa		33.38	■■■□□ 2.93
ROPN1-209	ENST00000495093	CUL7	Q14999	1698 aa		33.31	■■■□□ 2.92
ROPN1-209	ENST00000495093	RUSC2	Q8N2Y8	1516 aa		33.31	■■■□□ 2.92
ROPN1-209	ENST00000495093	CARMIL1	Q5VZK9	1371 aa		33.29	■■■□□ 2.92
ROPN1-209	ENST00000495093	ERCC6L2	Q5T890	1561 aa		33.2	■■■□□ 2.91
ROPN1-209	ENST00000495093	SHROOM2	Q13796	1616 aa		33.17	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms