Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 KIF2C-204ENST00000452259 1124 ntTSL 59.12□□□□□ -0.958e-11■■□□□ 12.4
SND1Q7KZF4 KIF2C-208ENST00000493027 1091 ntTSL 57.53□□□□□ -1.28e-11■■□□□ 12.4
SND1Q7KZF4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.422e-7■■□□□ 12.4
SND1Q7KZF4 HYAL1-207ENST00000452672 561 ntTSL 412.47□□□□□ -0.412e-8■■□□□ 12.4
SND1Q7KZF4 LRRC69-205ENST00000520099 1861 ntTSL 29.62□□□□□ -0.872e-8■■□□□ 12.4
SND1Q7KZF4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.012e-8■■□□□ 12.4
SND1Q7KZF4 AC104966.1-201ENST00000467010 1464 ntBASIC6.43□□□□□ -1.382e-8■■□□□ 12.4
SND1Q7KZF4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.23□□□□□ -1.412e-8■■□□□ 12.4
SND1Q7KZF4 LAMB2-207ENST00000477225 535 ntTSL 213.34□□□□□ -0.272e-7■■□□□ 12.4
SND1Q7KZF4 CEACAM1-212ENST00000488639 429 ntTSL 312.21□□□□□ -0.454e-9■■□□□ 12.4
SND1Q7KZF4 M6PR-211ENST00000543845 596 ntTSL 316.75■□□□□ 0.272e-7■■□□□ 12.4
SND1Q7KZF4 M6PR-205ENST00000540837 648 ntTSL 212.38□□□□□ -0.432e-7■■□□□ 12.4
SND1Q7KZF4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.71e-8■■□□□ 12.4
SND1Q7KZF4 RNF128-203ENST00000418562 839 ntTSL 59.6□□□□□ -0.871e-8■■□□□ 12.4
SND1Q7KZF4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.7□□□□□ -1.51e-8■■□□□ 12.4
SND1Q7KZF4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.84■□□□□ 0.939e-16■■□□□ 12.3
SND1Q7KZF4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.79e-16■■□□□ 12.3
SND1Q7KZF4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.599e-16■■□□□ 12.3
SND1Q7KZF4 CFL1-210ENST00000530945 1509 ntTSL 217.49■□□□□ 0.399e-16■■□□□ 12.3
SND1Q7KZF4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.25■□□□□ 0.359e-16■■□□□ 12.3
SND1Q7KZF4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.3■□□□□ 0.29e-16■■□□□ 12.3
SND1Q7KZF4 CFL1-209ENST00000530413 647 ntTSL 1 (best)15.7■□□□□ 0.19e-16■■□□□ 12.3
SND1Q7KZF4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.54□□□□□ -0.089e-16■■□□□ 12.3
SND1Q7KZF4 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.28□□□□□ -0.129e-16■■□□□ 12.3
SND1Q7KZF4 CFL1-213ENST00000532134 855 ntTSL 513.33□□□□□ -0.289e-16■■□□□ 12.3
SND1Q7KZF4 CFL1-207ENST00000527752 766 ntTSL 512.02□□□□□ -0.499e-16■■□□□ 12.3
SND1Q7KZF4 PGK1-203ENST00000476531 960 ntTSL 210.74□□□□□ -0.698e-10■■□□□ 12.3
SND1Q7KZF4 SLC35A2-208ENST00000446885 877 ntTSL 316.86■□□□□ 0.299e-7■■□□□ 12.3
SND1Q7KZF4 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC13.03□□□□□ -0.327e-10■■□□□ 12.3
SND1Q7KZF4 SLC16A3-206ENST00000578684 866 ntTSL 318.9■□□□□ 0.622e-13■■□□□ 12.3
SND1Q7KZF4 SLC16A3-219ENST00000584689 1033 ntTSL 218.52■□□□□ 0.562e-13■■□□□ 12.3
SND1Q7KZF4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.381e-6■■□□□ 12.3
SND1Q7KZF4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.311e-6■■□□□ 12.3
SND1Q7KZF4 CD55-209ENST00000488171 1389 ntTSL 319.86■□□□□ 0.772e-7■■□□□ 12.3
SND1Q7KZF4 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC13.84□□□□□ -0.191e-6■■□□□ 12.3
SND1Q7KZF4 ALG11-201ENST00000519151 4574 ntTSL 27.23□□□□□ -1.251e-6■■□□□ 12.3
SND1Q7KZF4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.281e-6■■□□□ 12.3
SND1Q7KZF4 AC135050.2-202ENST00000532364 499 ntTSL 422.09■■□□□ 1.134e-10■■□□□ 12.3
SND1Q7KZF4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.3■□□□□ 0.844e-10■■□□□ 12.3
SND1Q7KZF4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.85■□□□□ 0.774e-10■■□□□ 12.3
SND1Q7KZF4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.64e-10■■□□□ 12.3
SND1Q7KZF4 VKORC1-207ENST00000472468 461 ntTSL 218.28■□□□□ 0.524e-10■■□□□ 12.3
SND1Q7KZF4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.08■□□□□ 0.484e-10■■□□□ 12.3
SND1Q7KZF4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.394e-10■■□□□ 12.3
SND1Q7KZF4 AC135050.2-201ENST00000533518 2362 ntTSL 1 (best)17.05■□□□□ 0.324e-10■■□□□ 12.3
SND1Q7KZF4 VKORC1-206ENST00000420057 746 ntTSL 214.84□□□□□ -0.034e-10■■□□□ 12.3
SND1Q7KZF4 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC12.55□□□□□ -0.44e-10■■□□□ 12.3
SND1Q7KZF4 VKORC1-208ENST00000498155 870 ntTSL 5 BASIC9.35□□□□□ -0.914e-10■■□□□ 12.3
SND1Q7KZF4 COMT-211ENST00000493893 354 ntTSL 314.21□□□□□ -0.131e-12■■□□□ 12.3
SND1Q7KZF4 CP-204ENST00000462336 607 ntTSL 37.75□□□□□ -1.177e-17■■□□□ 12.3
SND1Q7KZF4 CP-215ENST00000497902 542 ntTSL 25.87□□□□□ -1.477e-17■■□□□ 12.3
SND1Q7KZF4 TRAPPC4-210ENST00000531290 1135 ntTSL 222.94■■□□□ 1.263e-8■■□□□ 12.3
SND1Q7KZF4 CHID1-206ENST00000524538 553 ntTSL 221.98■■□□□ 1.113e-8■■□□□ 12.3
SND1Q7KZF4 CHID1-216ENST00000529539 602 ntTSL 221.98■■□□□ 1.113e-8■■□□□ 12.3
SND1Q7KZF4 CYB5R1-204ENST00000478009 899 ntTSL 221.17■□□□□ 0.983e-8■■□□□ 12.3
SND1Q7KZF4 CHID1-220ENST00000532909 619 ntTSL 520.73■□□□□ 0.913e-8■■□□□ 12.3
SND1Q7KZF4 CHID1-223ENST00000534207 1171 ntTSL 518.73■□□□□ 0.593e-8■■□□□ 12.3
SND1Q7KZF4 PAICS-204ENST00000505164 1514 ntTSL 215.88■□□□□ 0.131e-9■■□□□ 12.3
SND1Q7KZF4 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.193e-8■■□□□ 12.3
SND1Q7KZF4 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC13.68□□□□□ -0.223e-8■■□□□ 12.3
SND1Q7KZF4 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC13.4□□□□□ -0.263e-8■■□□□ 12.3
SND1Q7KZF4 TRAPPC4-205ENST00000525079 768 ntTSL 313.26□□□□□ -0.293e-8■■□□□ 12.3
SND1Q7KZF4 TRAPPC4-209ENST00000528230 583 ntTSL 3 BASIC12.53□□□□□ -0.43e-8■■□□□ 12.3
SND1Q7KZF4 VSIR-203ENST00000481568 790 ntTSL 212.25□□□□□ -0.453e-8■■□□□ 12.3
SND1Q7KZF4 NUP37-208ENST00000551744 762 ntTSL 512.19□□□□□ -0.464e-7■■□□□ 12.3
SND1Q7KZF4 TRAPPC4-211ENST00000533012 817 ntTSL 211.71□□□□□ -0.533e-8■■□□□ 12.3
SND1Q7KZF4 NUP37-207ENST00000551200 1158 ntTSL 1 (best)11.66□□□□□ -0.544e-7■■□□□ 12.3
SND1Q7KZF4 AL035071.1-201ENST00000569087 2131 ntBASIC11.66□□□□□ -0.543e-8■■□□□ 12.3
SND1Q7KZF4 TRAPPC4-213ENST00000533149 1340 ntTSL 211.62□□□□□ -0.553e-8■■□□□ 12.3
SND1Q7KZF4 TRAPPC4-204ENST00000524797 1924 ntTSL 211.51□□□□□ -0.573e-8■■□□□ 12.3
SND1Q7KZF4 TRAPPC4-201ENST00000359005 849 ntTSL 2 BASIC11.24□□□□□ -0.613e-8■■□□□ 12.3
SND1Q7KZF4 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.81e-9■■□□□ 12.3
SND1Q7KZF4 TRAPPC4-206ENST00000525303 654 ntTSL 2 BASIC9.89□□□□□ -0.833e-8■■□□□ 12.3
SND1Q7KZF4 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.94e-7■■□□□ 12.3
SND1Q7KZF4 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC9.39□□□□□ -0.911e-9■■□□□ 12.3
SND1Q7KZF4 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.964e-7■■□□□ 12.3
SND1Q7KZF4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.141e-9■■□□□ 12.3
SND1Q7KZF4 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.55□□□□□ -1.21e-9■■□□□ 12.3
SND1Q7KZF4 NUP37-202ENST00000543021 784 ntTSL 25.4□□□□□ -1.544e-7■■□□□ 12.3
SND1Q7KZF4 G3BP1-203ENST00000507878 577 ntTSL 411.97□□□□□ -0.491e-10■■□□□ 12.3
SND1Q7KZF4 ANXA1-203ENST00000415424 526 ntTSL 44.55□□□□□ -1.683e-8■■□□□ 12.3
SND1Q7KZF4 CD46-216ENST00000490278 747 ntTSL 27.03□□□□□ -1.285e-17■■□□□ 12.3
SND1Q7KZF4 GARS-206ENST00000478124 1877 ntTSL 519.43■□□□□ 0.72e-7■■□□□ 12.3
SND1Q7KZF4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.881e-9■■□□□ 12.3
SND1Q7KZF4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.771e-9■■□□□ 12.3
SND1Q7KZF4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.26■□□□□ 0.671e-9■■□□□ 12.3
SND1Q7KZF4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.23■□□□□ 0.671e-9■■□□□ 12.3
SND1Q7KZF4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.43■□□□□ 0.061e-9■■□□□ 12.3
SND1Q7KZF4 PSMD8-208ENST00000592561 771 ntTSL 211.36□□□□□ -0.591e-9■■□□□ 12.3
SND1Q7KZF4 PSMD8-203ENST00000590331 422 ntTSL 28.79□□□□□ -11e-9■■□□□ 12.3
SND1Q7KZF4 SLC2A8-212ENST00000484617 478 ntTSL 316.52■□□□□ 0.246e-7■■□□□ 12.3
SND1Q7KZF4 PLOD1-206ENST00000470133 362 ntTSL 313.37□□□□□ -0.273e-8■■□□□ 12.3
SND1Q7KZF4 A2M-212ENST00000545828 471 ntTSL 48.45□□□□□ -1.064e-71■■□□□ 12.3
SND1Q7KZF4 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.331e-7■■□□□ 12.3
SND1Q7KZF4 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.581e-7■■□□□ 12.3
SND1Q7KZF4 EPHA2-204ENST00000480202 795 ntTSL 518.6■□□□□ 0.572e-8■■□□□ 12.2
SND1Q7KZF4 CD55-211ENST00000635614 1145 ntTSL 511.05□□□□□ -0.643e-7■■□□□ 12.2
SND1Q7KZF4 CRLF1-204ENST00000596360 413 ntTSL 216.63■□□□□ 0.254e-34■■□□□ 12.2
SND1Q7KZF4 CPD-208ENST00000584051 575 ntTSL 55.93□□□□□ -1.463e-8■■□□□ 12.2
SND1Q7KZF4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.333e-7■■□□□ 12.2
Retrieved 100 of 13,567 protein–RNA pairs in 88.2 ms