RNA–Protein interactions for RNA: ENST00000596360.1

CRLF1-204, Transcript of cytokine receptor like factor 1, humanhuman

TSL 2

Gene CRLF1, Length 413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1-204ENST00000596360 NISCHQ9Y2I1 1504 aa38.98■■■■□ 3.83
CRLF1-204ENST00000596360 CCDC180Q9P1Z9 1646 aa34.65■■■■□ 3.14
CRLF1-204ENST00000596360 ABCC9O60706 1549 aa33.84■■■■□ 3.01
CRLF1-204ENST00000596360 RB1CC1Q8TDY2 1594 aa32.6■■■□□ 2.81
CRLF1-204ENST00000596360 NACADO15069 1562 aa32.58■■■□□ 2.81
CRLF1-204ENST00000596360 DCAF8L2P0C7V8 631 aa32.5■■■□□ 2.79
CRLF1-204ENST00000596360 ZCCHC6Q5VYS8 1495 aaKnown RBP32.46■■■□□ 2.79
CRLF1-204ENST00000596360 MYO15BQ96JP2 1530 aa32.42■■■□□ 2.78
CRLF1-204ENST00000596360 DCAF1Q9Y4B6 1507 aa32.28■■■□□ 2.76
CRLF1-204ENST00000596360 UNC13AQ9UPW8 1703 aa31.84■■■□□ 2.69
CRLF1-204ENST00000596360 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.65
CRLF1-204ENST00000596360 BICRAQ9NZM4 1560 aa31.6■■■□□ 2.65
CRLF1-204ENST00000596360 SCRIBQ14160 1630 aa31.56■■■□□ 2.64
CRLF1-204ENST00000596360 SHROOM4Q9ULL8 1493 aa31.32■■■□□ 2.6
CRLF1-204ENST00000596360 DNAJC5BQ9UF47 199 aa31.07■■■□□ 2.56
CRLF1-204ENST00000596360 EIF4G1Q04637 1599 aaKnown RBP30.76■■■□□ 2.52
CRLF1-204ENST00000596360 CC2D2AQ9P2K1 1620 aa30.62■■■□□ 2.49
CRLF1-204ENST00000596360 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
CRLF1-204ENST00000596360 SMARCA4P51532 1647 aa30.22■■■□□ 2.43
CRLF1-204ENST00000596360 BAZ1AQ9NRL2 1556 aaPredicted RBP30.2■■■□□ 2.43
CRLF1-204ENST00000596360 NCAPD3P42695 1498 aa30.07■■■□□ 2.4
CRLF1-204ENST00000596360 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
CRLF1-204ENST00000596360 SMARCA2P51531 1590 aa30.03■■■□□ 2.4
CRLF1-204ENST00000596360 MROH2BQ7Z745 1585 aa30.02■■■□□ 2.4
CRLF1-204ENST00000596360 PEG3Q9GZU2 1588 aa29.96■■■□□ 2.39
CRLF1-204ENST00000596360 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
CRLF1-204ENST00000596360 BAZ1BQ9UIG0 1483 aaKnown RBP29.8■■■□□ 2.36
CRLF1-204ENST00000596360 RSF1Q96T23 1441 aaPredicted RBP29.7■■■□□ 2.34
CRLF1-204ENST00000596360 WIZO95785 1651 aa29.69■■■□□ 2.34
CRLF1-204ENST00000596360 TOP2AP11388 1531 aaKnown RBP29.39■■■□□ 2.3
CRLF1-204ENST00000596360 NESP48681 1621 aa29.29■■■□□ 2.28
CRLF1-204ENST00000596360 LAMC3Q9Y6N6 1575 aa29.26■■■□□ 2.27
CRLF1-204ENST00000596360 CADPSQ9ULU8 1353 aa29.19■■■□□ 2.26
CRLF1-204ENST00000596360 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
CRLF1-204ENST00000596360 PDS5BQ9NTI5 1447 aa29.06■■■□□ 2.24
CRLF1-204ENST00000596360 CCDC88BA6NC98 1476 aa29.04■■■□□ 2.24
CRLF1-204ENST00000596360 CFTRP13569 1480 aa29.02■■■□□ 2.24
CRLF1-204ENST00000596360 KIF21AQ7Z4S6 1674 aa28.94■■■□□ 2.22
CRLF1-204ENST00000596360 SUPT5HO00267 1087 aaKnown RBP28.91■■■□□ 2.22
CRLF1-204ENST00000596360 CUX2O14529 1486 aa28.9■■■□□ 2.22
CRLF1-204ENST00000596360 THOC2Q8NI27 1593 aaKnown RBP28.85■■■□□ 2.21
CRLF1-204ENST00000596360 FANCD2Q9BXW9 1451 aa28.83■■■□□ 2.21
CRLF1-204ENST00000596360 CEP164Q9UPV0 1460 aa28.78■■■□□ 2.2
CRLF1-204ENST00000596360 PRDM2Q13029 1718 aa28.78■■■□□ 2.2
CRLF1-204ENST00000596360 MRC2Q9UBG0 1479 aa28.75■■■□□ 2.19
CRLF1-204ENST00000596360 WDR62O43379 1518 aa28.66■■■□□ 2.18
CRLF1-204ENST00000596360 URB2Q14146 1524 aaKnown RBP28.53■■■□□ 2.16
CRLF1-204ENST00000596360 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
CRLF1-204ENST00000596360 TOPBP1Q92547 1522 aa28.38■■■□□ 2.13
CRLF1-204ENST00000596360 DNMBPQ6XZF7 1577 aa28.34■■■□□ 2.13
CRLF1-204ENST00000596360 IFT140Q96RY7 1462 aa28.2■■■□□ 2.1
CRLF1-204ENST00000596360 CUX1P39880 1505 aa28.16■■■□□ 2.1
CRLF1-204ENST00000596360 POLA1P09884 1462 aaPredicted RBP28.13■■■□□ 2.09
CRLF1-204ENST00000596360 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
CRLF1-204ENST00000596360 FGD5Q6ZNL6 1462 aa28.06■■■□□ 2.08
CRLF1-204ENST00000596360 ZNF608Q9ULD9 1512 aaPredicted RBP28.04■■■□□ 2.08
CRLF1-204ENST00000596360 SOGA1O94964 1423 aa28.02■■■□□ 2.08
CRLF1-204ENST00000596360 DNAJC5Q9H3Z4 198 aa28■■■□□ 2.07
CRLF1-204ENST00000596360 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
CRLF1-204ENST00000596360 WRNQ14191 1432 aaPredicted RBP eCLIP28■■■□□ 2.07
CRLF1-204ENST00000596360 TOP2BQ02880 1626 aa27.93■■■□□ 2.06
CRLF1-204ENST00000596360 BIVM-ERCC5R4GMW8 1640 aa27.93■■■□□ 2.06
CRLF1-204ENST00000596360 EIF4G3O43432 1585 aaKnown RBP27.93■■■□□ 2.06
CRLF1-204ENST00000596360 SYNJ1O43426 1573 aa27.9■■■□□ 2.06
CRLF1-204ENST00000596360 AQRO60306 1485 aaKnown RBP eCLIP27.89■■■□□ 2.062e-7■□□□□ 8.7
CRLF1-204ENST00000596360 WDR97A6NE52 1622 aa27.88■■■□□ 2.05
CRLF1-204ENST00000596360 TDRD9Q8NDG6 1382 aaKnown RBP27.85■■■□□ 2.05
CRLF1-204ENST00000596360 ABCA10Q8WWZ4 1543 aa27.81■■■□□ 2.04
CRLF1-204ENST00000596360 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
CRLF1-204ENST00000596360 GRIN2BQ13224 1484 aa27.7■■■□□ 2.02
CRLF1-204ENST00000596360 GAPVD1Q14C86 1478 aa27.7■■■□□ 2.02
CRLF1-204ENST00000596360 ABCA5Q8WWZ7 1642 aa27.68■■■□□ 2.02
CRLF1-204ENST00000596360 SNAPC4Q5SXM2 1469 aa27.63■■■□□ 2.01
CRLF1-204ENST00000596360 MAGI1Q96QZ7 1491 aaPredicted RBP27.63■■■□□ 2.01
CRLF1-204ENST00000596360 PBRM1Q86U86 1689 aa27.62■■■□□ 2.01
CRLF1-204ENST00000596360 CHD1O14646 1710 aa27.58■■■□□ 2.01
CRLF1-204ENST00000596360 FBLN2P98095 1184 aa27.54■■■□□ 2
CRLF1-204ENST00000596360 SYNJ2O15056 1496 aa27.51■■■□□ 2
CRLF1-204ENST00000596360 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
CRLF1-204ENST00000596360 ERICH3Q5RHP9 1530 aa27.48■■□□□ 1.99
CRLF1-204ENST00000596360 KIF27Q86VH2 1401 aa27.41■■□□□ 1.98
CRLF1-204ENST00000596360 ADAMTS12P58397 1594 aa27.41■■□□□ 1.98
CRLF1-204ENST00000596360 FHAD1B1AJZ9 1412 aa27.39■■□□□ 1.97
CRLF1-204ENST00000596360 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
CRLF1-204ENST00000596360 GRIN2AQ12879 1464 aa27.33■■□□□ 1.97
CRLF1-204ENST00000596360 IGF1RP08069 1367 aa27.31■■□□□ 1.96
CRLF1-204ENST00000596360 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
CRLF1-204ENST00000596360 ARHGEF11O15085 1522 aa27.23■■□□□ 1.95
CRLF1-204ENST00000596360 NUP160Q12769 1436 aa27.23■■□□□ 1.95
CRLF1-204ENST00000596360 RIMBP3CA6NJZ7 1639 aa27.23■■□□□ 1.95
CRLF1-204ENST00000596360 RIMBP3BA6NNM3 1639 aa27.23■■□□□ 1.95
CRLF1-204ENST00000596360 RIMBP3Q9UFD9 1639 aa27.23■■□□□ 1.95
CRLF1-204ENST00000596360 CUL7Q14999 1698 aa27.22■■□□□ 1.95
CRLF1-204ENST00000596360 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
CRLF1-204ENST00000596360 RUSC2Q8N2Y8 1516 aa27.15■■□□□ 1.94
CRLF1-204ENST00000596360 CARMIL1Q5VZK9 1371 aa27.14■■□□□ 1.94
CRLF1-204ENST00000596360 CHIC1Q5VXU3 224 aa27.03■■□□□ 1.92
CRLF1-204ENST00000596360 SHROOM2Q13796 1616 aa27.01■■□□□ 1.92
CRLF1-204ENST00000596360 ARAP1Q96P48 1450 aa27.01■■□□□ 1.91
CRLF1-204ENST00000596360 RAPGEF2Q9Y4G8 1499 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms