RNA–Protein interactions for RNA: ENST00000635614.1

CD55-211, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 1,145 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-211ENST00000635614 AEBP2Q6ZN18 517 aaPredicted RBP27.56■■■□□ 2
CD55-211ENST00000635614 CHIC1Q5VXU3 224 aa27.51■■□□□ 1.99
CD55-211ENST00000635614 NISCHQ9Y2I1 1504 aa25.32■■□□□ 1.64
CD55-211ENST00000635614 PHF23Q9BUL5 403 aaPredicted RBP24.26■■□□□ 1.47
CD55-211ENST00000635614 SENP3Q9H4L4 574 aaPredicted RBP23.3■■□□□ 1.32
CD55-211ENST00000635614 CCDC180Q9P1Z9 1646 aa22.66■■□□□ 1.22
CD55-211ENST00000635614 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
CD55-211ENST00000635614 ABCC9O60706 1549 aa22.29■■□□□ 1.16
CD55-211ENST00000635614 FOXD1Q16676 465 aa21.54■■□□□ 1.04
CD55-211ENST00000635614 RB1CC1Q8TDY2 1594 aa21.46■■□□□ 1.03
CD55-211ENST00000635614 NACADO15069 1562 aa21.39■■□□□ 1.01
CD55-211ENST00000635614 DCAF8L2P0C7V8 631 aa21.32■■□□□ 1
CD55-211ENST00000635614 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
CD55-211ENST00000635614 ADRA2BP18089 450 aa21.19■□□□□ 0.98
CD55-211ENST00000635614 PPP6R1Q9UPN7 881 aa21.19■□□□□ 0.98
CD55-211ENST00000635614 POTEDQ86YR6 584 aa21.13■□□□□ 0.97
CD55-211ENST00000635614 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
CD55-211ENST00000635614 DCAF1Q9Y4B6 1507 aa21.01■□□□□ 0.95
CD55-211ENST00000635614 UNC13AQ9UPW8 1703 aa20.82■□□□□ 0.92
CD55-211ENST00000635614 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.92
CD55-211ENST00000635614 BICRAQ9NZM4 1560 aa20.67■□□□□ 0.9
CD55-211ENST00000635614 SHROOM4Q9ULL8 1493 aa20.64■□□□□ 0.89
CD55-211ENST00000635614 DNAJC5BQ9UF47 199 aa20.58■□□□□ 0.89
CD55-211ENST00000635614 SCRIBQ14160 1630 aa20.55■□□□□ 0.88
CD55-211ENST00000635614 PIAS4Q8N2W9 510 aaPredicted RBP20.44■□□□□ 0.86
CD55-211ENST00000635614 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
CD55-211ENST00000635614 KCNA4P22459 653 aa20.18■□□□□ 0.82
CD55-211ENST00000635614 CC2D2AQ9P2K1 1620 aa20.17■□□□□ 0.82
CD55-211ENST00000635614 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
CD55-211ENST00000635614 PPP4R3CPQ6ZMV5 832 aa19.98■□□□□ 0.79
CD55-211ENST00000635614 MSH5O43196 834 aa19.75■□□□□ 0.75
CD55-211ENST00000635614 NCAPD3P42695 1498 aa19.71■□□□□ 0.75
CD55-211ENST00000635614 BAZ1AQ9NRL2 1556 aaPredicted RBP19.7■□□□□ 0.74
CD55-211ENST00000635614 SMARCA2P51531 1590 aa19.69■□□□□ 0.74
CD55-211ENST00000635614 SMARCA4P51532 1647 aa19.68■□□□□ 0.74
CD55-211ENST00000635614 ATAD2BQ9ULI0 1458 aa19.64■□□□□ 0.73
CD55-211ENST00000635614 NCBP3Q53F19 620 aaKnown RBP19.62■□□□□ 0.73
CD55-211ENST00000635614 HMGXB3Q12766 1538 aa19.58■□□□□ 0.73
CD55-211ENST00000635614 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
CD55-211ENST00000635614 BAZ1BQ9UIG0 1483 aaKnown RBP19.51■□□□□ 0.71
CD55-211ENST00000635614 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
CD55-211ENST00000635614 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
CD55-211ENST00000635614 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
CD55-211ENST00000635614 NPM3O75607 178 aaKnown RBP19.34■□□□□ 0.69
CD55-211ENST00000635614 ERCC6Q03468 1493 aa19.34■□□□□ 0.69
CD55-211ENST00000635614 SLC4A1APQ9BWU0 796 aaKnown RBP19.32■□□□□ 0.68
CD55-211ENST00000635614 CNKSR2Q8WXI2 1034 aa19.3■□□□□ 0.68
CD55-211ENST00000635614 LAMC3Q9Y6N6 1575 aa19.24■□□□□ 0.67
CD55-211ENST00000635614 WIZO95785 1651 aa19.23■□□□□ 0.67
CD55-211ENST00000635614 CUX2O14529 1486 aa19.22■□□□□ 0.67
CD55-211ENST00000635614 RSF1Q96T23 1441 aaPredicted RBP19.18■□□□□ 0.66
CD55-211ENST00000635614 PDS5BQ9NTI5 1447 aa19.17■□□□□ 0.66
CD55-211ENST00000635614 NESP48681 1621 aa19.17■□□□□ 0.66
CD55-211ENST00000635614 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
CD55-211ENST00000635614 TOP2AP11388 1531 aaKnown RBP19.07■□□□□ 0.64
CD55-211ENST00000635614 MAPK8IP2Q13387 824 aaPredicted RBP19.05■□□□□ 0.64
CD55-211ENST00000635614 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
CD55-211ENST00000635614 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
CD55-211ENST00000635614 THOC2Q8NI27 1593 aaKnown RBP18.96■□□□□ 0.63
CD55-211ENST00000635614 CFTRP13569 1480 aa18.95■□□□□ 0.62
CD55-211ENST00000635614 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
CD55-211ENST00000635614 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
CD55-211ENST00000635614 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
CD55-211ENST00000635614 DNAJC5Q9H3Z4 198 aa18.87■□□□□ 0.61
CD55-211ENST00000635614 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
CD55-211ENST00000635614 WDR62O43379 1518 aa18.83■□□□□ 0.6
CD55-211ENST00000635614 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
CD55-211ENST00000635614 RNF216Q9NWF9 866 aaPredicted RBP18.78■□□□□ 0.6
CD55-211ENST00000635614 DMRT2Q9Y5R5 561 aa18.7■□□□□ 0.58
CD55-211ENST00000635614 ABCC8Q09428 1581 aa18.68■□□□□ 0.58
CD55-211ENST00000635614 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.57
CD55-211ENST00000635614 ZBTB22O15209 634 aa18.59■□□□□ 0.57
CD55-211ENST00000635614 SUPT5HO00267 1087 aaKnown RBP18.58■□□□□ 0.56
CD55-211ENST00000635614 HOXD11P31277 338 aaPredicted RBP18.56■□□□□ 0.56
CD55-211ENST00000635614 TOPBP1Q92547 1522 aa18.54■□□□□ 0.56
CD55-211ENST00000635614 IFT140Q96RY7 1462 aa18.53■□□□□ 0.56
CD55-211ENST00000635614 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
CD55-211ENST00000635614 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
CD55-211ENST00000635614 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
CD55-211ENST00000635614 POLA1P09884 1462 aaPredicted RBP18.35■□□□□ 0.53
CD55-211ENST00000635614 ZNF608Q9ULD9 1512 aaPredicted RBP18.34■□□□□ 0.53
CD55-211ENST00000635614 SOGA1O94964 1423 aa18.34■□□□□ 0.53
CD55-211ENST00000635614 TARBP1Q13395 1621 aaKnown RBP18.31■□□□□ 0.52
CD55-211ENST00000635614 WDR97A6NE52 1622 aa18.31■□□□□ 0.52
CD55-211ENST00000635614 EIF4G3O43432 1585 aaKnown RBP18.3■□□□□ 0.52
CD55-211ENST00000635614 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
CD55-211ENST00000635614 CUX1P39880 1505 aa18.27■□□□□ 0.51
CD55-211ENST00000635614 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.515e-8■■■□□ 15.3
CD55-211ENST00000635614 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
CD55-211ENST00000635614 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
CD55-211ENST00000635614 FBLN2P98095 1184 aa18.17■□□□□ 0.5
CD55-211ENST00000635614 WRNQ14191 1432 aaPredicted RBP eCLIP18.16■□□□□ 0.5
CD55-211ENST00000635614 GRIN2BQ13224 1484 aa18.15■□□□□ 0.5
CD55-211ENST00000635614 MAGI1Q96QZ7 1491 aaPredicted RBP18.14■□□□□ 0.5
CD55-211ENST00000635614 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
CD55-211ENST00000635614 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
CD55-211ENST00000635614 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
CD55-211ENST00000635614 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
CD55-211ENST00000635614 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
CD55-211ENST00000635614 TOP2BQ02880 1626 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms