RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 NISCHQ9Y2I1 1504 aa31.65■■■□□ 2.66
TRAPPC4-212ENST00000533058 CCDC180Q9P1Z9 1646 aa28.19■■■□□ 2.1
TRAPPC4-212ENST00000533058 ABCC9O60706 1549 aa27.73■■■□□ 2.03
TRAPPC4-212ENST00000533058 RB1CC1Q8TDY2 1594 aa26.64■■□□□ 1.86
TRAPPC4-212ENST00000533058 NACADO15069 1562 aa26.6■■□□□ 1.85
TRAPPC4-212ENST00000533058 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
TRAPPC4-212ENST00000533058 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
TRAPPC4-212ENST00000533058 ZCCHC6Q5VYS8 1495 aaKnown RBP26.32■■□□□ 1.8
TRAPPC4-212ENST00000533058 DCAF1Q9Y4B6 1507 aa26.24■■□□□ 1.79
TRAPPC4-212ENST00000533058 UNC13AQ9UPW8 1703 aa25.91■■□□□ 1.74
TRAPPC4-212ENST00000533058 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
TRAPPC4-212ENST00000533058 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
TRAPPC4-212ENST00000533058 DNAJC5BQ9UF47 199 aa25.69■■□□□ 1.7
TRAPPC4-212ENST00000533058 SHROOM4Q9ULL8 1493 aa25.65■■□□□ 1.7
TRAPPC4-212ENST00000533058 SCRIBQ14160 1630 aa25.63■■□□□ 1.69
TRAPPC4-212ENST00000533058 EIF4G1Q04637 1599 aaKnown RBP25.17■■□□□ 1.62
TRAPPC4-212ENST00000533058 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.61
TRAPPC4-212ENST00000533058 CECR2Q9BXF3 1484 aa24.98■■□□□ 1.59
TRAPPC4-212ENST00000533058 NCAPD3P42695 1498 aa24.59■■□□□ 1.53
TRAPPC4-212ENST00000533058 SMARCA4P51532 1647 aa24.56■■□□□ 1.52
TRAPPC4-212ENST00000533058 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
TRAPPC4-212ENST00000533058 ATAD2BQ9ULI0 1458 aa24.53■■□□□ 1.52
TRAPPC4-212ENST00000533058 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
TRAPPC4-212ENST00000533058 HMGXB3Q12766 1538 aa24.4■■□□□ 1.5
TRAPPC4-212ENST00000533058 PEG3Q9GZU2 1588 aa24.39■■□□□ 1.5
TRAPPC4-212ENST00000533058 MROH2BQ7Z745 1585 aa24.36■■□□□ 1.49
TRAPPC4-212ENST00000533058 BAZ1BQ9UIG0 1483 aaKnown RBP24.28■■□□□ 1.48
TRAPPC4-212ENST00000533058 RSF1Q96T23 1441 aaPredicted RBP24.06■■□□□ 1.44
TRAPPC4-212ENST00000533058 WIZO95785 1651 aa24.03■■□□□ 1.44
TRAPPC4-212ENST00000533058 NESP48681 1621 aa23.94■■□□□ 1.42
TRAPPC4-212ENST00000533058 ERCC6Q03468 1493 aa23.93■■□□□ 1.42
TRAPPC4-212ENST00000533058 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
TRAPPC4-212ENST00000533058 CADPSQ9ULU8 1353 aa23.85■■□□□ 1.41
TRAPPC4-212ENST00000533058 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.41
TRAPPC4-212ENST00000533058 CUX2O14529 1486 aa23.81■■□□□ 1.4
TRAPPC4-212ENST00000533058 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
TRAPPC4-212ENST00000533058 CFTRP13569 1480 aa23.66■■□□□ 1.38
TRAPPC4-212ENST00000533058 THOC2Q8NI27 1593 aaKnown RBP23.62■■□□□ 1.37
TRAPPC4-212ENST00000533058 KIF21AQ7Z4S6 1674 aa23.59■■□□□ 1.37
TRAPPC4-212ENST00000533058 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
TRAPPC4-212ENST00000533058 FANCD2Q9BXW9 1451 aa23.52■■□□□ 1.36
TRAPPC4-212ENST00000533058 MRC2Q9UBG0 1479 aa23.52■■□□□ 1.36
TRAPPC4-212ENST00000533058 CEP164Q9UPV0 1460 aa23.5■■□□□ 1.35
TRAPPC4-212ENST00000533058 WDR62O43379 1518 aa23.44■■□□□ 1.34
TRAPPC4-212ENST00000533058 DNAJC5Q9H3Z4 198 aa23.35■■□□□ 1.33
TRAPPC4-212ENST00000533058 PRDM2Q13029 1718 aa23.32■■□□□ 1.32
TRAPPC4-212ENST00000533058 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
TRAPPC4-212ENST00000533058 SUPT5HO00267 1087 aaKnown RBP23.23■■□□□ 1.31
TRAPPC4-212ENST00000533058 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
TRAPPC4-212ENST00000533058 TOPBP1Q92547 1522 aa23.12■■□□□ 1.29
TRAPPC4-212ENST00000533058 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
TRAPPC4-212ENST00000533058 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
TRAPPC4-212ENST00000533058 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
TRAPPC4-212ENST00000533058 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
TRAPPC4-212ENST00000533058 TARBP1Q13395 1621 aaKnown RBP22.86■■□□□ 1.25
TRAPPC4-212ENST00000533058 CUX1P39880 1505 aa22.85■■□□□ 1.25
TRAPPC4-212ENST00000533058 SOGA1O94964 1423 aa22.84■■□□□ 1.25
TRAPPC4-212ENST00000533058 OSCARQ8IYS5 282 aa22.83■■□□□ 1.25
TRAPPC4-212ENST00000533058 FGD5Q6ZNL6 1462 aa22.81■■□□□ 1.24
TRAPPC4-212ENST00000533058 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
TRAPPC4-212ENST00000533058 EIF4G3O43432 1585 aaKnown RBP22.78■■□□□ 1.24
TRAPPC4-212ENST00000533058 AQRO60306 1485 aaKnown RBP eCLIP22.78■■□□□ 1.241e-6■■■■□ 24.3
TRAPPC4-212ENST00000533058 WDR97A6NE52 1622 aa22.73■■□□□ 1.23
TRAPPC4-212ENST00000533058 TDRD9Q8NDG6 1382 aaKnown RBP22.72■■□□□ 1.23
TRAPPC4-212ENST00000533058 WRNQ14191 1432 aaPredicted RBP eCLIP22.68■■□□□ 1.22
TRAPPC4-212ENST00000533058 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
TRAPPC4-212ENST00000533058 TOP2BQ02880 1626 aa22.62■■□□□ 1.21
TRAPPC4-212ENST00000533058 BIVM-ERCC5R4GMW8 1640 aa22.6■■□□□ 1.21
TRAPPC4-212ENST00000533058 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
TRAPPC4-212ENST00000533058 SYNJ1O43426 1573 aa22.56■■□□□ 1.2
TRAPPC4-212ENST00000533058 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
TRAPPC4-212ENST00000533058 GAPVD1Q14C86 1478 aa22.55■■□□□ 1.2
TRAPPC4-212ENST00000533058 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
TRAPPC4-212ENST00000533058 FBLN2P98095 1184 aa22.51■■□□□ 1.19
TRAPPC4-212ENST00000533058 ABCA5Q8WWZ7 1642 aa22.49■■□□□ 1.19
TRAPPC4-212ENST00000533058 CHMP7Q8WUX9 453 aaPredicted RBP22.48■■□□□ 1.19
TRAPPC4-212ENST00000533058 CHD1O14646 1710 aa22.48■■□□□ 1.19
TRAPPC4-212ENST00000533058 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
TRAPPC4-212ENST00000533058 PBRM1Q86U86 1689 aa22.41■■□□□ 1.18
TRAPPC4-212ENST00000533058 ARHGEF11O15085 1522 aa22.38■■□□□ 1.17
TRAPPC4-212ENST00000533058 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
TRAPPC4-212ENST00000533058 RIMBP3CA6NJZ7 1639 aa22.36■■□□□ 1.17
TRAPPC4-212ENST00000533058 RIMBP3BA6NNM3 1639 aa22.36■■□□□ 1.17
TRAPPC4-212ENST00000533058 RIMBP3Q9UFD9 1639 aa22.36■■□□□ 1.17
TRAPPC4-212ENST00000533058 ERICH3Q5RHP9 1530 aa22.35■■□□□ 1.17
TRAPPC4-212ENST00000533058 CLASP1Q7Z460 1538 aa22.33■■□□□ 1.17
TRAPPC4-212ENST00000533058 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
TRAPPC4-212ENST00000533058 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
TRAPPC4-212ENST00000533058 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
TRAPPC4-212ENST00000533058 NUP160Q12769 1436 aa22.23■■□□□ 1.15
TRAPPC4-212ENST00000533058 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
TRAPPC4-212ENST00000533058 CYB5RLQ6IPT4 315 aa22.2■■□□□ 1.14
TRAPPC4-212ENST00000533058 IGF1RP08069 1367 aa22.19■■□□□ 1.14
TRAPPC4-212ENST00000533058 ARAP1Q96P48 1450 aa22.19■■□□□ 1.14
TRAPPC4-212ENST00000533058 CEP170Q5SW79 1584 aa22.14■■□□□ 1.13
TRAPPC4-212ENST00000533058 CUL7Q14999 1698 aa22.06■■□□□ 1.12
TRAPPC4-212ENST00000533058 SHROOM2Q13796 1616 aa22.04■■□□□ 1.12
TRAPPC4-212ENST00000533058 CARMIL1Q5VZK9 1371 aa22.03■■□□□ 1.12
TRAPPC4-212ENST00000533058 JPH4Q96JJ6 628 aa22.01■■□□□ 1.11
TRAPPC4-212ENST00000533058 KIAA0586Q9BVV6 1533 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms