RNA–Protein interactions for RNA: ENST00000524553.5

CFL1-202, Transcript of cofilin 1, humanhuman

TSL 2 BASIC

Gene CFL1, Length 860 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-202ENST00000524553 NISCHQ9Y2I1 1504 aa41.67■■■■■ 4.26
CFL1-202ENST00000524553 ABCC9O60706 1549 aa37.39■■■■□ 3.58
CFL1-202ENST00000524553 CCDC180Q9P1Z9 1646 aa37.39■■■■□ 3.58
CFL1-202ENST00000524553 RB1CC1Q8TDY2 1594 aa35.58■■■■□ 3.29
CFL1-202ENST00000524553 NACADO15069 1562 aa35.32■■■■□ 3.24
CFL1-202ENST00000524553 DCAF8L2P0C7V8 631 aa35.28■■■■□ 3.24
CFL1-202ENST00000524553 DNAJC5BQ9UF47 199 aa35.01■■■■□ 3.2
CFL1-202ENST00000524553 UNC13AQ9UPW8 1703 aa34.86■■■■□ 3.17
CFL1-202ENST00000524553 PABPN1Q86U42 306 aaKnown RBP eCLIP34.83■■■■□ 3.17
CFL1-202ENST00000524553 MYO15BQ96JP2 1530 aa34.78■■■■□ 3.16
CFL1-202ENST00000524553 BICRAQ9NZM4 1560 aa34.53■■■■□ 3.12
CFL1-202ENST00000524553 ZCCHC6Q5VYS8 1495 aaKnown RBP34.52■■■■□ 3.12
CFL1-202ENST00000524553 DCAF1Q9Y4B6 1507 aa34.37■■■■□ 3.09
CFL1-202ENST00000524553 SCRIBQ14160 1630 aa34.12■■■■□ 3.05
CFL1-202ENST00000524553 SHROOM4Q9ULL8 1493 aa33.99■■■■□ 3.03
CFL1-202ENST00000524553 CC2D2AQ9P2K1 1620 aa33.77■■■■□ 3
CFL1-202ENST00000524553 EIF4G1Q04637 1599 aaKnown RBP33.68■■■□□ 2.98
CFL1-202ENST00000524553 CECR2Q9BXF3 1484 aa33.64■■■□□ 2.98
CFL1-202ENST00000524553 NCAPD3P42695 1498 aa32.58■■■□□ 2.81
CFL1-202ENST00000524553 SMARCA4P51532 1647 aa32.52■■■□□ 2.8
CFL1-202ENST00000524553 ATAD2BQ9ULI0 1458 aa32.52■■■□□ 2.8
CFL1-202ENST00000524553 SMARCA2P51531 1590 aa32.43■■■□□ 2.78
CFL1-202ENST00000524553 HMGXB3Q12766 1538 aa32.36■■■□□ 2.77
CFL1-202ENST00000524553 BAZ1AQ9NRL2 1556 aaPredicted RBP32.34■■■□□ 2.77
CFL1-202ENST00000524553 ERCC6Q03468 1493 aa32.28■■■□□ 2.76
CFL1-202ENST00000524553 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
CFL1-202ENST00000524553 CUX2O14529 1486 aa32.15■■■□□ 2.74
CFL1-202ENST00000524553 PEG3Q9GZU2 1588 aa32.15■■■□□ 2.74
CFL1-202ENST00000524553 MROH2BQ7Z745 1585 aa32.13■■■□□ 2.73
CFL1-202ENST00000524553 NESP48681 1621 aa32.12■■■□□ 2.73
CFL1-202ENST00000524553 DNAJC5Q9H3Z4 198 aa32.1■■■□□ 2.73
CFL1-202ENST00000524553 LAMC3Q9Y6N6 1575 aa31.87■■■□□ 2.69
CFL1-202ENST00000524553 WIZO95785 1651 aa31.8■■■□□ 2.68
CFL1-202ENST00000524553 THOC2Q8NI27 1593 aaKnown RBP31.77■■■□□ 2.68
CFL1-202ENST00000524553 KIF21AQ7Z4S6 1674 aa31.75■■■□□ 2.67
CFL1-202ENST00000524553 PDS5BQ9NTI5 1447 aa31.69■■■□□ 2.66
CFL1-202ENST00000524553 CADPSQ9ULU8 1353 aa31.62■■■□□ 2.65
CFL1-202ENST00000524553 RSF1Q96T23 1441 aaPredicted RBP31.46■■■□□ 2.63
CFL1-202ENST00000524553 MRC2Q9UBG0 1479 aa31.41■■■□□ 2.62
CFL1-202ENST00000524553 TOP2AP11388 1531 aaKnown RBP31.34■■■□□ 2.61
CFL1-202ENST00000524553 WDR62O43379 1518 aa31.32■■■□□ 2.6
CFL1-202ENST00000524553 CEP164Q9UPV0 1460 aa31.31■■■□□ 2.6
CFL1-202ENST00000524553 FANCD2Q9BXW9 1451 aa31.28■■■□□ 2.6
CFL1-202ENST00000524553 CFTRP13569 1480 aa31.25■■■□□ 2.59
CFL1-202ENST00000524553 PRDM2Q13029 1718 aa31.04■■■□□ 2.56
CFL1-202ENST00000524553 URB2Q14146 1524 aaKnown RBP31.02■■■□□ 2.56
CFL1-202ENST00000524553 CCDC88BA6NC98 1476 aa31■■■□□ 2.55
CFL1-202ENST00000524553 TRIM41Q8WV44 630 aa30.8■■■□□ 2.52
CFL1-202ENST00000524553 OSCARQ8IYS5 282 aa30.73■■■□□ 2.51
CFL1-202ENST00000524553 TOPBP1Q92547 1522 aa30.69■■■□□ 2.5
CFL1-202ENST00000524553 IFT140Q96RY7 1462 aa30.67■■■□□ 2.5
CFL1-202ENST00000524553 ZNF608Q9ULD9 1512 aaPredicted RBP30.64■■■□□ 2.5
CFL1-202ENST00000524553 ABCC8Q09428 1581 aa30.61■■■□□ 2.49
CFL1-202ENST00000524553 DNMBPQ6XZF7 1577 aa30.58■■■□□ 2.49
CFL1-202ENST00000524553 EIF4G3O43432 1585 aaKnown RBP30.48■■■□□ 2.47
CFL1-202ENST00000524553 TARBP1Q13395 1621 aaKnown RBP30.42■■■□□ 2.46
CFL1-202ENST00000524553 AQRO60306 1485 aaKnown RBP eCLIP30.38■■■□□ 2.457e-13■■■□□ 15.6
CFL1-202ENST00000524553 POLA1P09884 1462 aaPredicted RBP30.37■■■□□ 2.45
CFL1-202ENST00000524553 RIMBP3CA6NJZ7 1639 aa30.35■■■□□ 2.45
CFL1-202ENST00000524553 RIMBP3BA6NNM3 1639 aa30.35■■■□□ 2.45
CFL1-202ENST00000524553 RIMBP3Q9UFD9 1639 aa30.35■■■□□ 2.45
CFL1-202ENST00000524553 CHD1O14646 1710 aa30.3■■■□□ 2.44
CFL1-202ENST00000524553 RAD54L2Q9Y4B4 1467 aa30.3■■■□□ 2.44
CFL1-202ENST00000524553 SOGA1O94964 1423 aa30.26■■■□□ 2.43
CFL1-202ENST00000524553 FBLN2P98095 1184 aa30.23■■■□□ 2.43
CFL1-202ENST00000524553 ARHGEF11O15085 1522 aa30.22■■■□□ 2.43
CFL1-202ENST00000524553 SUPT5HO00267 1087 aaKnown RBP30.21■■■□□ 2.43
CFL1-202ENST00000524553 FGD5Q6ZNL6 1462 aa30.2■■■□□ 2.43
CFL1-202ENST00000524553 TDRD9Q8NDG6 1382 aaKnown RBP30.2■■■□□ 2.43
CFL1-202ENST00000524553 CUX1P39880 1505 aa30.18■■■□□ 2.42
CFL1-202ENST00000524553 WDR97A6NE52 1622 aa30.07■■■□□ 2.4
CFL1-202ENST00000524553 SNAPC4Q5SXM2 1469 aa30.06■■■□□ 2.4
CFL1-202ENST00000524553 CYB5RLQ6IPT4 315 aa30.04■■■□□ 2.4
CFL1-202ENST00000524553 CHMP7Q8WUX9 453 aaPredicted RBP29.97■■■□□ 2.39
CFL1-202ENST00000524553 GRIN2BQ13224 1484 aa29.97■■■□□ 2.39
CFL1-202ENST00000524553 MAGI1Q96QZ7 1491 aaPredicted RBP29.95■■■□□ 2.39
CFL1-202ENST00000524553 ARAP1Q96P48 1450 aa29.93■■■□□ 2.38
CFL1-202ENST00000524553 PBRM1Q86U86 1689 aa29.92■■■□□ 2.38
CFL1-202ENST00000524553 SYNJ1O43426 1573 aa29.89■■■□□ 2.38
CFL1-202ENST00000524553 GAPVD1Q14C86 1478 aa29.88■■■□□ 2.37
CFL1-202ENST00000524553 CLASP1Q7Z460 1538 aa29.86■■■□□ 2.37
CFL1-202ENST00000524553 SYNJ2O15056 1496 aa29.86■■■□□ 2.37
CFL1-202ENST00000524553 ABCA10Q8WWZ4 1543 aa29.84■■■□□ 2.37
CFL1-202ENST00000524553 ABCA5Q8WWZ7 1642 aa29.81■■■□□ 2.36
CFL1-202ENST00000524553 WRNQ14191 1432 aaPredicted RBP eCLIP29.73■■■□□ 2.35
CFL1-202ENST00000524553 BIVM-ERCC5R4GMW8 1640 aa29.72■■■□□ 2.35
CFL1-202ENST00000524553 TRHP20396 242 aaPredicted RBP29.72■■■□□ 2.35
CFL1-202ENST00000524553 TOP2BQ02880 1626 aa29.71■■■□□ 2.35
CFL1-202ENST00000524553 ADAMTS12P58397 1594 aa29.59■■■□□ 2.33
CFL1-202ENST00000524553 GRIN2AQ12879 1464 aa29.58■■■□□ 2.33
CFL1-202ENST00000524553 CEP170Q5SW79 1584 aa29.49■■■□□ 2.31
CFL1-202ENST00000524553 FHAD1B1AJZ9 1412 aa29.49■■■□□ 2.31
CFL1-202ENST00000524553 ERICH3Q5RHP9 1530 aa29.47■■■□□ 2.31
CFL1-202ENST00000524553 NUP160Q12769 1436 aa29.45■■■□□ 2.31
CFL1-202ENST00000524553 ERCC6L2Q5T890 1561 aa29.45■■■□□ 2.31
CFL1-202ENST00000524553 SHROOM2Q13796 1616 aa29.34■■■□□ 2.29
CFL1-202ENST00000524553 PRG4Q92954 1404 aaPredicted RBP29.22■■■□□ 2.27
CFL1-202ENST00000524553 JPH4Q96JJ6 628 aa29.21■■■□□ 2.27
CFL1-202ENST00000524553 RUSC2Q8N2Y8 1516 aa29.15■■■□□ 2.26
CFL1-202ENST00000524553 KIF27Q86VH2 1401 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms