RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 NISCHQ9Y2I1 1504 aa31.91■■■□□ 2.7
TRAPPC4-214ENST00000533632 CCDC180Q9P1Z9 1646 aa28.3■■■□□ 2.12
TRAPPC4-214ENST00000533632 ABCC9O60706 1549 aa27.47■■□□□ 1.99
TRAPPC4-214ENST00000533632 ZCCHC6Q5VYS8 1495 aaKnown RBP26.64■■□□□ 1.86
TRAPPC4-214ENST00000533632 NACADO15069 1562 aa26.52■■□□□ 1.84
TRAPPC4-214ENST00000533632 RB1CC1Q8TDY2 1594 aa26.49■■□□□ 1.83
TRAPPC4-214ENST00000533632 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
TRAPPC4-214ENST00000533632 DCAF8L2P0C7V8 631 aa26.44■■□□□ 1.82
TRAPPC4-214ENST00000533632 DCAF1Q9Y4B6 1507 aa26.41■■□□□ 1.82
TRAPPC4-214ENST00000533632 UNC13AQ9UPW8 1703 aa26.04■■□□□ 1.76
TRAPPC4-214ENST00000533632 SCRIBQ14160 1630 aa25.83■■□□□ 1.73
TRAPPC4-214ENST00000533632 BICRAQ9NZM4 1560 aa25.79■■□□□ 1.72
TRAPPC4-214ENST00000533632 PABPN1Q86U42 306 aaKnown RBP eCLIP25.67■■□□□ 1.7
TRAPPC4-214ENST00000533632 SHROOM4Q9ULL8 1493 aa25.42■■□□□ 1.66
TRAPPC4-214ENST00000533632 DNAJC5BQ9UF47 199 aa25.09■■□□□ 1.61
TRAPPC4-214ENST00000533632 EIF4G1Q04637 1599 aaKnown RBP25.04■■□□□ 1.6
TRAPPC4-214ENST00000533632 CC2D2AQ9P2K1 1620 aa24.89■■□□□ 1.57
TRAPPC4-214ENST00000533632 CECR2Q9BXF3 1484 aa24.87■■□□□ 1.57
TRAPPC4-214ENST00000533632 SMARCA4P51532 1647 aa24.74■■□□□ 1.55
TRAPPC4-214ENST00000533632 BAZ1AQ9NRL2 1556 aaPredicted RBP24.69■■□□□ 1.54
TRAPPC4-214ENST00000533632 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
TRAPPC4-214ENST00000533632 ATAD2BQ9ULI0 1458 aa24.53■■□□□ 1.52
TRAPPC4-214ENST00000533632 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
TRAPPC4-214ENST00000533632 NCAPD3P42695 1498 aa24.48■■□□□ 1.51
TRAPPC4-214ENST00000533632 SMARCA2P51531 1590 aa24.47■■□□□ 1.51
TRAPPC4-214ENST00000533632 HMGXB3Q12766 1538 aa24.39■■□□□ 1.49
TRAPPC4-214ENST00000533632 RSF1Q96T23 1441 aaPredicted RBP24.38■■□□□ 1.49
TRAPPC4-214ENST00000533632 WIZO95785 1651 aa24.38■■□□□ 1.49
TRAPPC4-214ENST00000533632 BAZ1BQ9UIG0 1483 aaKnown RBP24.3■■□□□ 1.48
TRAPPC4-214ENST00000533632 SUPT5HO00267 1087 aaKnown RBP24.13■■□□□ 1.45
TRAPPC4-214ENST00000533632 TOP2AP11388 1531 aaKnown RBP24.09■■□□□ 1.45
TRAPPC4-214ENST00000533632 NESP48681 1621 aa23.87■■□□□ 1.41
TRAPPC4-214ENST00000533632 CCDC88BA6NC98 1476 aa23.81■■□□□ 1.4
TRAPPC4-214ENST00000533632 LAMC3Q9Y6N6 1575 aa23.79■■□□□ 1.4
TRAPPC4-214ENST00000533632 CADPSQ9ULU8 1353 aa23.75■■□□□ 1.39
TRAPPC4-214ENST00000533632 CFTRP13569 1480 aa23.68■■□□□ 1.38
TRAPPC4-214ENST00000533632 KIF21AQ7Z4S6 1674 aa23.63■■□□□ 1.37
TRAPPC4-214ENST00000533632 ERCC6Q03468 1493 aa23.59■■□□□ 1.37
TRAPPC4-214ENST00000533632 PRDM2Q13029 1718 aa23.58■■□□□ 1.37
TRAPPC4-214ENST00000533632 PDS5BQ9NTI5 1447 aa23.57■■□□□ 1.36
TRAPPC4-214ENST00000533632 THOC2Q8NI27 1593 aaKnown RBP23.49■■□□□ 1.35
TRAPPC4-214ENST00000533632 FANCD2Q9BXW9 1451 aa23.48■■□□□ 1.35
TRAPPC4-214ENST00000533632 CEP164Q9UPV0 1460 aa23.42■■□□□ 1.34
TRAPPC4-214ENST00000533632 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
TRAPPC4-214ENST00000533632 WDR62O43379 1518 aa23.32■■□□□ 1.32
TRAPPC4-214ENST00000533632 CUX2O14529 1486 aa23.31■■□□□ 1.32
TRAPPC4-214ENST00000533632 URB2Q14146 1524 aaKnown RBP23.29■■□□□ 1.32
TRAPPC4-214ENST00000533632 TOPBP1Q92547 1522 aa23.16■■□□□ 1.3
TRAPPC4-214ENST00000533632 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.3
TRAPPC4-214ENST00000533632 ABCC8Q09428 1581 aa23.09■■□□□ 1.29
TRAPPC4-214ENST00000533632 CUX1P39880 1505 aa23.09■■□□□ 1.29
TRAPPC4-214ENST00000533632 POLA1P09884 1462 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC4-214ENST00000533632 SYNJ1O43426 1573 aa22.96■■□□□ 1.27
TRAPPC4-214ENST00000533632 BIVM-ERCC5R4GMW8 1640 aa22.95■■□□□ 1.26
TRAPPC4-214ENST00000533632 WRNQ14191 1432 aaPredicted RBP eCLIP22.94■■□□□ 1.26
TRAPPC4-214ENST00000533632 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
TRAPPC4-214ENST00000533632 TARBP1Q13395 1621 aaKnown RBP22.94■■□□□ 1.26
TRAPPC4-214ENST00000533632 TOP2BQ02880 1626 aa22.93■■□□□ 1.26
TRAPPC4-214ENST00000533632 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
TRAPPC4-214ENST00000533632 RAD54L2Q9Y4B4 1467 aa22.88■■□□□ 1.25
TRAPPC4-214ENST00000533632 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
TRAPPC4-214ENST00000533632 CHIC1Q5VXU3 224 aa22.84■■□□□ 1.25
TRAPPC4-214ENST00000533632 SOGA1O94964 1423 aa22.84■■□□□ 1.25
TRAPPC4-214ENST00000533632 WDR97A6NE52 1622 aa22.83■■□□□ 1.24
TRAPPC4-214ENST00000533632 EIF4G3O43432 1585 aaKnown RBP22.79■■□□□ 1.24
TRAPPC4-214ENST00000533632 ABCA10Q8WWZ4 1543 aa22.73■■□□□ 1.23
TRAPPC4-214ENST00000533632 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.231e-6■■■■□ 24.3
TRAPPC4-214ENST00000533632 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
TRAPPC4-214ENST00000533632 TDRD9Q8NDG6 1382 aaKnown RBP22.7■■□□□ 1.22
TRAPPC4-214ENST00000533632 ABCA5Q8WWZ7 1642 aa22.67■■□□□ 1.22
TRAPPC4-214ENST00000533632 PBRM1Q86U86 1689 aa22.6■■□□□ 1.21
TRAPPC4-214ENST00000533632 GAPVD1Q14C86 1478 aa22.59■■□□□ 1.21
TRAPPC4-214ENST00000533632 GRIN2BQ13224 1484 aa22.55■■□□□ 1.2
TRAPPC4-214ENST00000533632 SNAPC4Q5SXM2 1469 aa22.52■■□□□ 1.2
TRAPPC4-214ENST00000533632 CHD1O14646 1710 aa22.49■■□□□ 1.19
TRAPPC4-214ENST00000533632 MAGI1Q96QZ7 1491 aaPredicted RBP22.48■■□□□ 1.19
TRAPPC4-214ENST00000533632 RUSC2Q8N2Y8 1516 aa22.46■■□□□ 1.19
TRAPPC4-214ENST00000533632 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.18
TRAPPC4-214ENST00000533632 KIF27Q86VH2 1401 aa22.42■■□□□ 1.18
TRAPPC4-214ENST00000533632 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
TRAPPC4-214ENST00000533632 SYNJ2O15056 1496 aa22.39■■□□□ 1.17
TRAPPC4-214ENST00000533632 DNAJC5Q9H3Z4 198 aa22.36■■□□□ 1.17
TRAPPC4-214ENST00000533632 IGF1RP08069 1367 aa22.35■■□□□ 1.17
TRAPPC4-214ENST00000533632 FHAD1B1AJZ9 1412 aa22.33■■□□□ 1.16
TRAPPC4-214ENST00000533632 OSCARQ8IYS5 282 aa22.33■■□□□ 1.16
TRAPPC4-214ENST00000533632 FBLN2P98095 1184 aa22.31■■□□□ 1.16
TRAPPC4-214ENST00000533632 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
TRAPPC4-214ENST00000533632 CUL7Q14999 1698 aa22.29■■□□□ 1.16
TRAPPC4-214ENST00000533632 GRIN2AQ12879 1464 aa22.29■■□□□ 1.16
TRAPPC4-214ENST00000533632 CHMP7Q8WUX9 453 aaPredicted RBP22.29■■□□□ 1.16
TRAPPC4-214ENST00000533632 EEA1Q15075 1411 aa22.27■■□□□ 1.16
TRAPPC4-214ENST00000533632 CLASP1Q7Z460 1538 aa22.23■■□□□ 1.15
TRAPPC4-214ENST00000533632 CEP170Q5SW79 1584 aa22.22■■□□□ 1.15
TRAPPC4-214ENST00000533632 NUP160Q12769 1436 aa22.2■■□□□ 1.14
TRAPPC4-214ENST00000533632 CARMIL1Q5VZK9 1371 aa22.19■■□□□ 1.14
TRAPPC4-214ENST00000533632 CSRNP3Q8WYN3 585 aa22.19■■□□□ 1.14
TRAPPC4-214ENST00000533632 PRXQ9BXM0 1461 aa22.14■■□□□ 1.13
TRAPPC4-214ENST00000533632 KIF21BO75037 1637 aa22.09■■□□□ 1.13
TRAPPC4-214ENST00000533632 RAPGEF2Q9Y4G8 1499 aa22.09■■□□□ 1.13
TRAPPC4-214ENST00000533632 RIMBP3CA6NJZ7 1639 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms