RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 NISCHQ9Y2I1 1504 aa24.23■■□□□ 1.47
TRAPPC4-206ENST00000525303 ABCC9O60706 1549 aa21.92■■□□□ 1.1
TRAPPC4-206ENST00000525303 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
TRAPPC4-206ENST00000525303 RB1CC1Q8TDY2 1594 aa20.84■□□□□ 0.93
TRAPPC4-206ENST00000525303 NACADO15069 1562 aa20.64■□□□□ 0.9
TRAPPC4-206ENST00000525303 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
TRAPPC4-206ENST00000525303 UNC13AQ9UPW8 1703 aa20.52■□□□□ 0.88
TRAPPC4-206ENST00000525303 DCAF8L2P0C7V8 631 aa20.47■□□□□ 0.87
TRAPPC4-206ENST00000525303 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
TRAPPC4-206ENST00000525303 MYO15BQ96JP2 1530 aa20.29■□□□□ 0.84
TRAPPC4-206ENST00000525303 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
TRAPPC4-206ENST00000525303 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
TRAPPC4-206ENST00000525303 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
TRAPPC4-206ENST00000525303 SHROOM4Q9ULL8 1493 aa19.91■□□□□ 0.78
TRAPPC4-206ENST00000525303 SCRIBQ14160 1630 aa19.91■□□□□ 0.78
TRAPPC4-206ENST00000525303 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
TRAPPC4-206ENST00000525303 EIF4G1Q04637 1599 aaKnown RBP19.75■□□□□ 0.75
TRAPPC4-206ENST00000525303 CECR2Q9BXF3 1484 aa19.74■□□□□ 0.75
TRAPPC4-206ENST00000525303 NCAPD3P42695 1498 aa19.02■□□□□ 0.63
TRAPPC4-206ENST00000525303 DNAJC5Q9H3Z4 198 aa19.01■□□□□ 0.63
TRAPPC4-206ENST00000525303 SMARCA4P51532 1647 aa18.97■□□□□ 0.63
TRAPPC4-206ENST00000525303 ATAD2BQ9ULI0 1458 aa18.96■□□□□ 0.63
TRAPPC4-206ENST00000525303 CUX2O14529 1486 aa18.93■□□□□ 0.62
TRAPPC4-206ENST00000525303 ERCC6Q03468 1493 aa18.93■□□□□ 0.62
TRAPPC4-206ENST00000525303 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
TRAPPC4-206ENST00000525303 HMGXB3Q12766 1538 aa18.91■□□□□ 0.62
TRAPPC4-206ENST00000525303 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC4-206ENST00000525303 NESP48681 1621 aa18.81■□□□□ 0.6
TRAPPC4-206ENST00000525303 BAZ1BQ9UIG0 1483 aaKnown RBP18.79■□□□□ 0.6
TRAPPC4-206ENST00000525303 PEG3Q9GZU2 1588 aa18.76■□□□□ 0.59
TRAPPC4-206ENST00000525303 THOC2Q8NI27 1593 aaKnown RBP18.68■□□□□ 0.58
TRAPPC4-206ENST00000525303 MROH2BQ7Z745 1585 aa18.68■□□□□ 0.58
TRAPPC4-206ENST00000525303 LAMC3Q9Y6N6 1575 aa18.67■□□□□ 0.58
TRAPPC4-206ENST00000525303 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
TRAPPC4-206ENST00000525303 WIZO95785 1651 aa18.5■□□□□ 0.55
TRAPPC4-206ENST00000525303 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
TRAPPC4-206ENST00000525303 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
TRAPPC4-206ENST00000525303 AEBP2Q6ZN18 517 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC4-206ENST00000525303 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.53
TRAPPC4-206ENST00000525303 WDR62O43379 1518 aa18.37■□□□□ 0.53
TRAPPC4-206ENST00000525303 CEP164Q9UPV0 1460 aa18.29■□□□□ 0.52
TRAPPC4-206ENST00000525303 FANCD2Q9BXW9 1451 aa18.25■□□□□ 0.51
TRAPPC4-206ENST00000525303 TOP2AP11388 1531 aaKnown RBP18.22■□□□□ 0.51
TRAPPC4-206ENST00000525303 CFTRP13569 1480 aa18.21■□□□□ 0.51
TRAPPC4-206ENST00000525303 RSF1Q96T23 1441 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC4-206ENST00000525303 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
TRAPPC4-206ENST00000525303 TRIM41Q8WV44 630 aa18.16■□□□□ 0.5
TRAPPC4-206ENST00000525303 URB2Q14146 1524 aaKnown RBP18.13■□□□□ 0.49
TRAPPC4-206ENST00000525303 OSCARQ8IYS5 282 aa18.01■□□□□ 0.47
TRAPPC4-206ENST00000525303 CCDC88BA6NC98 1476 aa17.99■□□□□ 0.47
TRAPPC4-206ENST00000525303 ZNF608Q9ULD9 1512 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC4-206ENST00000525303 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
TRAPPC4-206ENST00000525303 TOPBP1Q92547 1522 aa17.9■□□□□ 0.46
TRAPPC4-206ENST00000525303 RIMBP3CA6NJZ7 1639 aa17.89■□□□□ 0.45
TRAPPC4-206ENST00000525303 RIMBP3BA6NNM3 1639 aa17.89■□□□□ 0.45
TRAPPC4-206ENST00000525303 RIMBP3Q9UFD9 1639 aa17.89■□□□□ 0.45
TRAPPC4-206ENST00000525303 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
TRAPPC4-206ENST00000525303 DNMBPQ6XZF7 1577 aa17.85■□□□□ 0.45
TRAPPC4-206ENST00000525303 ABCC8Q09428 1581 aa17.83■□□□□ 0.45
TRAPPC4-206ENST00000525303 CHD1O14646 1710 aa17.82■□□□□ 0.44
TRAPPC4-206ENST00000525303 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
TRAPPC4-206ENST00000525303 ARHGEF11O15085 1522 aa17.77■□□□□ 0.44
TRAPPC4-206ENST00000525303 AQRO60306 1485 aaKnown RBP eCLIP17.72■□□□□ 0.431e-6■■■■□ 24.3
TRAPPC4-206ENST00000525303 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC4-206ENST00000525303 RAD54L2Q9Y4B4 1467 aa17.64■□□□□ 0.41
TRAPPC4-206ENST00000525303 FBLN2P98095 1184 aa17.61■□□□□ 0.41
TRAPPC4-206ENST00000525303 CYB5RLQ6IPT4 315 aa17.61■□□□□ 0.41
TRAPPC4-206ENST00000525303 SOGA1O94964 1423 aa17.6■□□□□ 0.41
TRAPPC4-206ENST00000525303 WDR97A6NE52 1622 aa17.59■□□□□ 0.41
TRAPPC4-206ENST00000525303 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
TRAPPC4-206ENST00000525303 ARAP1Q96P48 1450 aa17.58■□□□□ 0.41
TRAPPC4-206ENST00000525303 TDRD9Q8NDG6 1382 aaKnown RBP17.58■□□□□ 0.4
TRAPPC4-206ENST00000525303 CUX1P39880 1505 aa17.56■□□□□ 0.4
TRAPPC4-206ENST00000525303 SNAPC4Q5SXM2 1469 aa17.55■□□□□ 0.4
TRAPPC4-206ENST00000525303 PBRM1Q86U86 1689 aa17.52■□□□□ 0.4
TRAPPC4-206ENST00000525303 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.39
TRAPPC4-206ENST00000525303 SYNJ1O43426 1573 aa17.5■□□□□ 0.39
TRAPPC4-206ENST00000525303 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC4-206ENST00000525303 GRIN2BQ13224 1484 aa17.47■□□□□ 0.39
TRAPPC4-206ENST00000525303 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC4-206ENST00000525303 CHMP7Q8WUX9 453 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC4-206ENST00000525303 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
TRAPPC4-206ENST00000525303 ABCA5Q8WWZ7 1642 aa17.4■□□□□ 0.38
TRAPPC4-206ENST00000525303 GAPVD1Q14C86 1478 aa17.4■□□□□ 0.38
TRAPPC4-206ENST00000525303 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
TRAPPC4-206ENST00000525303 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.36
TRAPPC4-206ENST00000525303 SUPT5HO00267 1087 aaKnown RBP17.31■□□□□ 0.36
TRAPPC4-206ENST00000525303 BIVM-ERCC5R4GMW8 1640 aa17.3■□□□□ 0.36
TRAPPC4-206ENST00000525303 TOP2BQ02880 1626 aa17.27■□□□□ 0.36
TRAPPC4-206ENST00000525303 ADAMTS12P58397 1594 aa17.27■□□□□ 0.35
TRAPPC4-206ENST00000525303 GRIN2AQ12879 1464 aa17.26■□□□□ 0.35
TRAPPC4-206ENST00000525303 WRNQ14191 1432 aaPredicted RBP eCLIP17.25■□□□□ 0.35
TRAPPC4-206ENST00000525303 CEP170Q5SW79 1584 aa17.24■□□□□ 0.35
TRAPPC4-206ENST00000525303 ERCC6L2Q5T890 1561 aa17.24■□□□□ 0.35
TRAPPC4-206ENST00000525303 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
TRAPPC4-206ENST00000525303 NUP160Q12769 1436 aa17.19■□□□□ 0.34
TRAPPC4-206ENST00000525303 FHAD1B1AJZ9 1412 aa17.16■□□□□ 0.34
TRAPPC4-206ENST00000525303 ERICH3Q5RHP9 1530 aa17.16■□□□□ 0.34
TRAPPC4-206ENST00000525303 KIF13AQ9H1H9 1805 aa17.11■□□□□ 0.33
TRAPPC4-206ENST00000525303 RUSC2Q8N2Y8 1516 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 469 ms