RNA–Protein interactions for RNA: ENST00000590331.1

PSMD8-203, Transcript of proteasome 26S subunit, non-ATPase 8, humanhuman

TSL 2

Gene PSMD8, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD8-203ENST00000590331 NISCHQ9Y2I1 1504 aa17.52■□□□□ 0.39
PSMD8-203ENST00000590331 ABCC9O60706 1549 aa15.69■□□□□ 0.1
PSMD8-203ENST00000590331 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
PSMD8-203ENST00000590331 CCDC180Q9P1Z9 1646 aa15.26■□□□□ 0.03
PSMD8-203ENST00000590331 ZCCHC6Q5VYS8 1495 aaKnown RBP14.74□□□□□ -0.05
PSMD8-203ENST00000590331 RB1CC1Q8TDY2 1594 aa14.64□□□□□ -0.07
PSMD8-203ENST00000590331 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
PSMD8-203ENST00000590331 DCAF1Q9Y4B6 1507 aa14.52□□□□□ -0.08
PSMD8-203ENST00000590331 DCAF8L2P0C7V8 631 aa14.51□□□□□ -0.09
PSMD8-203ENST00000590331 SHROOM4Q9ULL8 1493 aa14.47□□□□□ -0.09
PSMD8-203ENST00000590331 NACADO15069 1562 aa14.46□□□□□ -0.09
PSMD8-203ENST00000590331 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.1
PSMD8-203ENST00000590331 BICRAQ9NZM4 1560 aa14.43□□□□□ -0.1
PSMD8-203ENST00000590331 MYO15BQ96JP2 1530 aa14.25□□□□□ -0.13
PSMD8-203ENST00000590331 DNAJC5Q9H3Z4 198 aa14.21□□□□□ -0.13
PSMD8-203ENST00000590331 CC2D2AQ9P2K1 1620 aa14.15□□□□□ -0.14
PSMD8-203ENST00000590331 CECR2Q9BXF3 1484 aa14.15□□□□□ -0.14
PSMD8-203ENST00000590331 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
PSMD8-203ENST00000590331 EIF4G1Q04637 1599 aaKnown RBP14.01□□□□□ -0.17
PSMD8-203ENST00000590331 SCRIBQ14160 1630 aa14□□□□□ -0.17
PSMD8-203ENST00000590331 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
PSMD8-203ENST00000590331 CUX2O14529 1486 aa13.63□□□□□ -0.23
PSMD8-203ENST00000590331 CHIC1Q5VXU3 224 aa13.62□□□□□ -0.23
PSMD8-203ENST00000590331 BAZ1AQ9NRL2 1556 aaPredicted RBP13.58□□□□□ -0.23
PSMD8-203ENST00000590331 MROH2BQ7Z745 1585 aa13.48□□□□□ -0.25
PSMD8-203ENST00000590331 WIZO95785 1651 aa13.45□□□□□ -0.26
PSMD8-203ENST00000590331 ERCC6Q03468 1493 aa13.45□□□□□ -0.26
PSMD8-203ENST00000590331 SMARCA4P51532 1647 aa13.43□□□□□ -0.26
PSMD8-203ENST00000590331 NESP48681 1621 aa13.42□□□□□ -0.26
PSMD8-203ENST00000590331 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
PSMD8-203ENST00000590331 TOP2AP11388 1531 aaKnown RBP13.35□□□□□ -0.27
PSMD8-203ENST00000590331 TRIM41Q8WV44 630 aa13.35□□□□□ -0.27
PSMD8-203ENST00000590331 THOC2Q8NI27 1593 aaKnown RBP13.34□□□□□ -0.27
PSMD8-203ENST00000590331 ATAD2BQ9ULI0 1458 aa13.33□□□□□ -0.28
PSMD8-203ENST00000590331 AEBP2Q6ZN18 517 aaPredicted RBP13.32□□□□□ -0.28
PSMD8-203ENST00000590331 HMGXB3Q12766 1538 aa13.24□□□□□ -0.29
PSMD8-203ENST00000590331 PEG3Q9GZU2 1588 aa13.23□□□□□ -0.29
PSMD8-203ENST00000590331 SMARCA2P51531 1590 aa13.22□□□□□ -0.29
PSMD8-203ENST00000590331 KIF21AQ7Z4S6 1674 aa13.17□□□□□ -0.3
PSMD8-203ENST00000590331 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
PSMD8-203ENST00000590331 BAZ1BQ9UIG0 1483 aaKnown RBP13.13□□□□□ -0.31
PSMD8-203ENST00000590331 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
PSMD8-203ENST00000590331 LOC105371045A0A1W2PR82 267 aa13.08□□□□□ -0.32
PSMD8-203ENST00000590331 FAM9AQ8IZU1 332 aaPredicted RBP13.04□□□□□ -0.32
PSMD8-203ENST00000590331 WDR62O43379 1518 aa13.02□□□□□ -0.33
PSMD8-203ENST00000590331 PDS5BQ9NTI5 1447 aa13.01□□□□□ -0.33
PSMD8-203ENST00000590331 EEA1Q15075 1411 aa13□□□□□ -0.33
PSMD8-203ENST00000590331 MRC2Q9UBG0 1479 aa12.99□□□□□ -0.33
PSMD8-203ENST00000590331 ABCC8Q09428 1581 aa12.97□□□□□ -0.33
PSMD8-203ENST00000590331 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
PSMD8-203ENST00000590331 WRNQ14191 1432 aaPredicted RBP eCLIP12.93□□□□□ -0.34
PSMD8-203ENST00000590331 OSCARQ8IYS5 282 aa12.91□□□□□ -0.34
PSMD8-203ENST00000590331 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.34
PSMD8-203ENST00000590331 RIMBP3CA6NJZ7 1639 aa12.89□□□□□ -0.35
PSMD8-203ENST00000590331 RIMBP3BA6NNM3 1639 aa12.89□□□□□ -0.35
PSMD8-203ENST00000590331 RIMBP3Q9UFD9 1639 aa12.89□□□□□ -0.35
PSMD8-203ENST00000590331 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
PSMD8-203ENST00000590331 PRDM2Q13029 1718 aa12.88□□□□□ -0.35
PSMD8-203ENST00000590331 CSRNP3Q8WYN3 585 aa12.83□□□□□ -0.36
PSMD8-203ENST00000590331 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
PSMD8-203ENST00000590331 CEP164Q9UPV0 1460 aa12.82□□□□□ -0.36
PSMD8-203ENST00000590331 URB2Q14146 1524 aaKnown RBP12.82□□□□□ -0.36
PSMD8-203ENST00000590331 FANCD2Q9BXW9 1451 aa12.81□□□□□ -0.36
PSMD8-203ENST00000590331 ARHGEF11O15085 1522 aa12.79□□□□□ -0.36
PSMD8-203ENST00000590331 SYNJ1O43426 1573 aa12.79□□□□□ -0.36
PSMD8-203ENST00000590331 TOP2BQ02880 1626 aa12.79□□□□□ -0.36
PSMD8-203ENST00000590331 BIVM-ERCC5R4GMW8 1640 aa12.79□□□□□ -0.36
PSMD8-203ENST00000590331 UBTFP17480 764 aaKnown RBP12.78□□□□□ -0.36
PSMD8-203ENST00000590331 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
PSMD8-203ENST00000590331 TNIKQ9UKE5 1360 aa12.76□□□□□ -0.37
PSMD8-203ENST00000590331 SOGA1O94964 1423 aa12.76□□□□□ -0.37
PSMD8-203ENST00000590331 CFTRP13569 1480 aa12.75□□□□□ -0.37
PSMD8-203ENST00000590331 HRCP23327 699 aa12.75□□□□□ -0.37
PSMD8-203ENST00000590331 KIF21BO75037 1637 aa12.74□□□□□ -0.37
PSMD8-203ENST00000590331 ZNF608Q9ULD9 1512 aaPredicted RBP12.74□□□□□ -0.37
PSMD8-203ENST00000590331 ZEB1P37275 1124 aaPredicted RBP12.69□□□□□ -0.38
PSMD8-203ENST00000590331 CEP162Q5TB80 1403 aa12.69□□□□□ -0.38
PSMD8-203ENST00000590331 ARAP1Q96P48 1450 aa12.68□□□□□ -0.38
PSMD8-203ENST00000590331 CYB5RLQ6IPT4 315 aa12.67□□□□□ -0.38
PSMD8-203ENST00000590331 RUSC2Q8N2Y8 1516 aa12.65□□□□□ -0.38
PSMD8-203ENST00000590331 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
PSMD8-203ENST00000590331 APLP2Q06481 763 aa12.61□□□□□ -0.39
PSMD8-203ENST00000590331 CUX1P39880 1505 aa12.61□□□□□ -0.39
PSMD8-203ENST00000590331 ERICH3Q5RHP9 1530 aa12.61□□□□□ -0.39
PSMD8-203ENST00000590331 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
PSMD8-203ENST00000590331 TRHP20396 242 aaPredicted RBP12.58□□□□□ -0.4
PSMD8-203ENST00000590331 EIF4G3O43432 1585 aaKnown RBP12.57□□□□□ -0.4
PSMD8-203ENST00000590331 CHD1O14646 1710 aa12.57□□□□□ -0.4
PSMD8-203ENST00000590331 CLIP1P30622 1438 aa12.56□□□□□ -0.4
PSMD8-203ENST00000590331 TOPBP1Q92547 1522 aa12.55□□□□□ -0.4
PSMD8-203ENST00000590331 AQRO60306 1485 aaKnown RBP eCLIP12.53□□□□□ -0.41e-8■■□□□ 11.8
PSMD8-203ENST00000590331 RAPGEF2Q9Y4G8 1499 aa12.51□□□□□ -0.41
PSMD8-203ENST00000590331 DNMBPQ6XZF7 1577 aa12.51□□□□□ -0.41
PSMD8-203ENST00000590331 TARBP1Q13395 1621 aaKnown RBP12.51□□□□□ -0.41
PSMD8-203ENST00000590331 PRXQ9BXM0 1461 aa12.49□□□□□ -0.41
PSMD8-203ENST00000590331 VPS8Q8N3P4 1428 aa12.48□□□□□ -0.41
PSMD8-203ENST00000590331 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
PSMD8-203ENST00000590331 PPARGC1BQ86YN6 1023 aaKnown RBP12.47□□□□□ -0.41
PSMD8-203ENST00000590331 CLASP1Q7Z460 1538 aa12.46□□□□□ -0.42
PSMD8-203ENST00000590331 CUL7Q14999 1698 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms