RNA–Protein interactions for RNA: ENST00000507878.6

G3BP1-203, Transcript of G3BP stress granule assembly factor 1, humanhuman

TSL 4

Gene G3BP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
G3BP1-203ENST00000507878 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
G3BP1-203ENST00000507878 AEBP2Q6ZN18 517 aaPredicted RBP27.64■■■□□ 2.02
G3BP1-203ENST00000507878 CHIC1Q5VXU3 224 aa27.18■■□□□ 1.94
G3BP1-203ENST00000507878 ABCC9O60706 1549 aa26.2■■□□□ 1.79
G3BP1-203ENST00000507878 CCDC180Q9P1Z9 1646 aa26.16■■□□□ 1.78
G3BP1-203ENST00000507878 RB1CC1Q8TDY2 1594 aa24.88■■□□□ 1.57
G3BP1-203ENST00000507878 NACADO15069 1562 aa24.76■■□□□ 1.55
G3BP1-203ENST00000507878 DNAJC5BQ9UF47 199 aa24.75■■□□□ 1.55
G3BP1-203ENST00000507878 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
G3BP1-203ENST00000507878 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
G3BP1-203ENST00000507878 PABPN1Q86U42 306 aaKnown RBP eCLIP24.42■■□□□ 1.5
G3BP1-203ENST00000507878 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
G3BP1-203ENST00000507878 BICRAQ9NZM4 1560 aa24.32■■□□□ 1.48
G3BP1-203ENST00000507878 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
G3BP1-203ENST00000507878 DCAF1Q9Y4B6 1507 aa24.16■■□□□ 1.46
G3BP1-203ENST00000507878 PHF23Q9BUL5 403 aaPredicted RBP24.01■■□□□ 1.43
G3BP1-203ENST00000507878 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
G3BP1-203ENST00000507878 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
G3BP1-203ENST00000507878 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
G3BP1-203ENST00000507878 EIF4G1Q04637 1599 aaKnown RBP23.64■■□□□ 1.37
G3BP1-203ENST00000507878 CECR2Q9BXF3 1484 aa23.6■■□□□ 1.37
G3BP1-203ENST00000507878 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
G3BP1-203ENST00000507878 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
G3BP1-203ENST00000507878 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
G3BP1-203ENST00000507878 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
G3BP1-203ENST00000507878 HMGXB3Q12766 1538 aa22.7■■□□□ 1.22
G3BP1-203ENST00000507878 SMARCA2P51531 1590 aa22.69■■□□□ 1.22
G3BP1-203ENST00000507878 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
G3BP1-203ENST00000507878 DNAJC5Q9H3Z4 198 aa22.63■■□□□ 1.21
G3BP1-203ENST00000507878 PEG3Q9GZU2 1588 aa22.61■■□□□ 1.21
G3BP1-203ENST00000507878 NESP48681 1621 aa22.57■■□□□ 1.2
G3BP1-203ENST00000507878 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
G3BP1-203ENST00000507878 CUX2O14529 1486 aa22.55■■□□□ 1.2
G3BP1-203ENST00000507878 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
G3BP1-203ENST00000507878 ERCC6Q03468 1493 aa22.52■■□□□ 1.2
G3BP1-203ENST00000507878 LAMC3Q9Y6N6 1575 aa22.32■■□□□ 1.16
G3BP1-203ENST00000507878 THOC2Q8NI27 1593 aaKnown RBP22.31■■□□□ 1.16
G3BP1-203ENST00000507878 WIZO95785 1651 aa22.24■■□□□ 1.15
G3BP1-203ENST00000507878 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
G3BP1-203ENST00000507878 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.14
G3BP1-203ENST00000507878 PDS5BQ9NTI5 1447 aa22.17■■□□□ 1.14
G3BP1-203ENST00000507878 PLPPR3Q6T4P5 718 aa22.15■■□□□ 1.14
G3BP1-203ENST00000507878 RSF1Q96T23 1441 aaPredicted RBP22.1■■□□□ 1.13
G3BP1-203ENST00000507878 MRC2Q9UBG0 1479 aa22.02■■□□□ 1.12
G3BP1-203ENST00000507878 WDR62O43379 1518 aa22■■□□□ 1.11
G3BP1-203ENST00000507878 CFTRP13569 1480 aa21.96■■□□□ 1.11
G3BP1-203ENST00000507878 TOP2AP11388 1531 aaKnown RBP21.94■■□□□ 1.1
G3BP1-203ENST00000507878 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
G3BP1-203ENST00000507878 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
G3BP1-203ENST00000507878 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
G3BP1-203ENST00000507878 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
G3BP1-203ENST00000507878 FOXD1Q16676 465 aa21.66■■□□□ 1.06
G3BP1-203ENST00000507878 PRDM2Q13029 1718 aa21.61■■□□□ 1.05
G3BP1-203ENST00000507878 ZNF608Q9ULD9 1512 aaPredicted RBP21.54■■□□□ 1.04
G3BP1-203ENST00000507878 TOPBP1Q92547 1522 aa21.52■■□□□ 1.04
G3BP1-203ENST00000507878 OSCARQ8IYS5 282 aa21.52■■□□□ 1.04
G3BP1-203ENST00000507878 TRIM41Q8WV44 630 aa21.5■■□□□ 1.03
G3BP1-203ENST00000507878 IFT140Q96RY7 1462 aa21.49■■□□□ 1.03
G3BP1-203ENST00000507878 DNMBPQ6XZF7 1577 aa21.4■■□□□ 1.02
G3BP1-203ENST00000507878 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
G3BP1-203ENST00000507878 TARBP1Q13395 1621 aaKnown RBP21.36■■□□□ 1.01
G3BP1-203ENST00000507878 EIF4G3O43432 1585 aaKnown RBP21.33■■□□□ 1.01
G3BP1-203ENST00000507878 AQRO60306 1485 aaKnown RBP eCLIP21.31■■□□□ 15e-8■■■■□ 26.3
G3BP1-203ENST00000507878 POLA1P09884 1462 aaPredicted RBP21.31■■□□□ 1
G3BP1-203ENST00000507878 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
G3BP1-203ENST00000507878 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
G3BP1-203ENST00000507878 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
G3BP1-203ENST00000507878 RAD54L2Q9Y4B4 1467 aa21.25■□□□□ 0.99
G3BP1-203ENST00000507878 ARHGEF11O15085 1522 aa21.21■□□□□ 0.99
G3BP1-203ENST00000507878 CUX1P39880 1505 aa21.19■□□□□ 0.98
G3BP1-203ENST00000507878 SOGA1O94964 1423 aa21.18■□□□□ 0.98
G3BP1-203ENST00000507878 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
G3BP1-203ENST00000507878 FGD5Q6ZNL6 1462 aa21.15■□□□□ 0.98
G3BP1-203ENST00000507878 CHD1O14646 1710 aa21.15■□□□□ 0.98
G3BP1-203ENST00000507878 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
G3BP1-203ENST00000507878 ADRA2BP18089 450 aa21.08■□□□□ 0.97
G3BP1-203ENST00000507878 WDR97A6NE52 1622 aa21.05■□□□□ 0.96
G3BP1-203ENST00000507878 SNAPC4Q5SXM2 1469 aa21.05■□□□□ 0.96
G3BP1-203ENST00000507878 ARAP1Q96P48 1450 aa21.03■□□□□ 0.96
G3BP1-203ENST00000507878 FBLN2P98095 1184 aa21.03■□□□□ 0.96
G3BP1-203ENST00000507878 CYB5RLQ6IPT4 315 aa21.02■□□□□ 0.96
G3BP1-203ENST00000507878 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
G3BP1-203ENST00000507878 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
G3BP1-203ENST00000507878 GRIN2BQ13224 1484 aa20.98■□□□□ 0.95
G3BP1-203ENST00000507878 MAGI1Q96QZ7 1491 aaPredicted RBP20.98■□□□□ 0.95
G3BP1-203ENST00000507878 ABCA10Q8WWZ4 1543 aa20.94■□□□□ 0.94
G3BP1-203ENST00000507878 SYNJ2O15056 1496 aa20.93■□□□□ 0.94
G3BP1-203ENST00000507878 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
G3BP1-203ENST00000507878 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
G3BP1-203ENST00000507878 ABCA5Q8WWZ7 1642 aa20.9■□□□□ 0.94
G3BP1-203ENST00000507878 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
G3BP1-203ENST00000507878 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
G3BP1-203ENST00000507878 TOP2BQ02880 1626 aa20.8■□□□□ 0.92
G3BP1-203ENST00000507878 WRNQ14191 1432 aaPredicted RBP eCLIP20.79■□□□□ 0.92
G3BP1-203ENST00000507878 BIVM-ERCC5R4GMW8 1640 aa20.79■□□□□ 0.92
G3BP1-203ENST00000507878 GRIN2AQ12879 1464 aa20.74■□□□□ 0.91
G3BP1-203ENST00000507878 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
G3BP1-203ENST00000507878 NUP160Q12769 1436 aa20.71■□□□□ 0.91
G3BP1-203ENST00000507878 ERCC6L2Q5T890 1561 aa20.7■□□□□ 0.9
G3BP1-203ENST00000507878 TRHP20396 242 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms