Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 AC124283.5-201ENST00000624661 1809 ntBASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 AC104581.1-202ENST00000635932 2618 ntBASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF3Q3KNV8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 NBPF21P-201ENST00000425093 1451 ntBASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF3Q3KNV8 BCL2-203ENST00000589955 5011 ntBASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 AC008550.1-201ENST00000511500 884 ntBASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 AP001412.1-201ENST00000608405 714 ntBASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF3Q3KNV8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms