RNA–Protein interactions for RNA: ENST00000336292.10

SYNM-202, Transcript of synemin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNM, Length 7,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-202ENST00000336292 DCAF8L2P0C7V8 631 aa32.76■■■□□ 2.84
SYNM-202ENST00000336292 EHMT2Q96KQ7 1210 aa30.39■■■□□ 2.46
SYNM-202ENST00000336292 SUPT5HO00267 1087 aaKnown RBP29.99■■■□□ 2.39
SYNM-202ENST00000336292 SHROOM4Q9ULL8 1493 aa29.67■■■□□ 2.34
SYNM-202ENST00000336292 TTBK1Q5TCY1 1321 aaPredicted RBP29.12■■■□□ 2.25
SYNM-202ENST00000336292 RANGAP1P46060 587 aaPredicted RBP28.98■■■□□ 2.23
SYNM-202ENST00000336292 FAM9AQ8IZU1 332 aaPredicted RBP28.69■■■□□ 2.18
SYNM-202ENST00000336292 ATP1B4Q9UN42 357 aaPredicted RBP28.68■■■□□ 2.18
SYNM-202ENST00000336292 APLP2Q06481 763 aa28.65■■■□□ 2.18
SYNM-202ENST00000336292 NISCHQ9Y2I1 1504 aa28.19■■■□□ 2.1
SYNM-202ENST00000336292 CHIC1Q5VXU3 224 aa27.97■■■□□ 2.07
SYNM-202ENST00000336292 MYT1LQ9UL68 1186 aa27.95■■■□□ 2.06
SYNM-202ENST00000336292 PCGF6Q9BYE7 350 aa27.84■■■□□ 2.05
SYNM-202ENST00000336292 PELP1Q8IZL8 1130 aaKnown RBP27.79■■■□□ 2.04
SYNM-202ENST00000336292 UBTFP17480 764 aaKnown RBP27.56■■■□□ 2
SYNM-202ENST00000336292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.51■■■□□ 2
SYNM-202ENST00000336292 HNRNPUL2Q1KMD3 747 aaKnown RBP27.51■■■□□ 2
SYNM-202ENST00000336292 PPARGC1BQ86YN6 1023 aaKnown RBP27.5■■□□□ 1.99
SYNM-202ENST00000336292 CNGB1Q14028 1251 aaPredicted RBP27.39■■□□□ 1.98
SYNM-202ENST00000336292 TRIM41Q8WV44 630 aa27.37■■□□□ 1.97
SYNM-202ENST00000336292 POLR3GLQ9BT43 218 aa27.36■■□□□ 1.97
SYNM-202ENST00000336292 ERICH6Q7L0X2 663 aa27.32■■□□□ 1.96
SYNM-202ENST00000336292 CCER1Q8TC90 406 aaPredicted RBP27.28■■□□□ 1.96
SYNM-202ENST00000336292 ITGAEP38570 1179 aa27.21■■□□□ 1.95
SYNM-202ENST00000336292 SLC4A1APQ9BWU0 796 aaKnown RBP27.19■■□□□ 1.94
SYNM-202ENST00000336292 YTHDC1Q96MU7 727 aaKnown RBP27.13■■□□□ 1.93
SYNM-202ENST00000336292 PLPPR3Q6T4P5 718 aa26.66■■□□□ 1.86
SYNM-202ENST00000336292 NEFLP07196 543 aa26.63■■□□□ 1.85
SYNM-202ENST00000336292 FBLN2P98095 1184 aa26.56■■□□□ 1.84
SYNM-202ENST00000336292 CENPBP07199 599 aaPredicted RBP26.54■■□□□ 1.84
SYNM-202ENST00000336292 MYT1Q01538 1121 aa26.53■■□□□ 1.84
SYNM-202ENST00000336292 SLC24A1O60721 1099 aa26.5■■□□□ 1.83
SYNM-202ENST00000336292 PABPN1Q86U42 306 aaKnown RBP eCLIP26.5■■□□□ 1.83
SYNM-202ENST00000336292 BCL11AQ9H165 835 aa26.42■■□□□ 1.82
SYNM-202ENST00000336292 BCANQ96GW7 911 aa26.42■■□□□ 1.82
SYNM-202ENST00000336292 DAXXQ9UER7 740 aaPredicted RBP26.29■■□□□ 1.8
SYNM-202ENST00000336292 ARID3CA6NKF2 412 aa26.23■■□□□ 1.79
SYNM-202ENST00000336292 FAM50AQ14320 339 aaKnown RBP26.18■■□□□ 1.78
SYNM-202ENST00000336292 TRIM52Q96A61 297 aa26.12■■□□□ 1.77
SYNM-202ENST00000336292 ZEB1P37275 1124 aaPredicted RBP26.11■■□□□ 1.77
SYNM-202ENST00000336292 ABCC9O60706 1549 aa26.11■■□□□ 1.77
SYNM-202ENST00000336292 ZNF326Q5BKZ1 582 aaKnown RBP26.09■■□□□ 1.77
SYNM-202ENST00000336292 LOC105371045A0A1W2PR82 267 aa26.08■■□□□ 1.77
SYNM-202ENST00000336292 CLSPNQ9HAW4 1339 aa26.03■■□□□ 1.76
SYNM-202ENST00000336292 NEUROD1Q13562 356 aa25.94■■□□□ 1.74
SYNM-202ENST00000336292 P3H3Q8IVL6 736 aa25.8■■□□□ 1.72
SYNM-202ENST00000336292 PLEKHG5O94827 1062 aa25.78■■□□□ 1.72
SYNM-202ENST00000336292 SENP3Q9H4L4 574 aaPredicted RBP25.77■■□□□ 1.72
SYNM-202ENST00000336292 A0A0G2JS52 829 aa25.68■■□□□ 1.7
SYNM-202ENST00000336292 SCAF1Q9H7N4 1312 aaKnown RBP25.68■■□□□ 1.7
SYNM-202ENST00000336292 ESF1Q9H501 851 aaKnown RBP25.68■■□□□ 1.7
SYNM-202ENST00000336292 ZNF777Q9ULD5 760 aaPredicted RBP25.67■■□□□ 1.7
SYNM-202ENST00000336292 ZNF316A6NFI3 1004 aaPredicted RBP25.67■■□□□ 1.7
SYNM-202ENST00000336292 TRIM26Q12899 539 aaPredicted RBP25.61■■□□□ 1.69
SYNM-202ENST00000336292 CHGAP10645 457 aaKnown RBP25.59■■□□□ 1.69
SYNM-202ENST00000336292 STAG3Q9UJ98 1225 aa25.56■■□□□ 1.68
SYNM-202ENST00000336292 ZBTB47Q9UFB7 747 aaPredicted RBP25.53■■□□□ 1.68
SYNM-202ENST00000336292 CANXP27824 592 aaKnown RBP25.42■■□□□ 1.66
SYNM-202ENST00000336292 ZBTB7CA1YPR0 619 aa25.35■■□□□ 1.65
SYNM-202ENST00000336292 HRCP23327 699 aa25.32■■□□□ 1.64
SYNM-202ENST00000336292 NEFMP07197 916 aa25.3■■□□□ 1.64
SYNM-202ENST00000336292 NPM1P06748 294 aaKnown RBP eCLIP25.24■■□□□ 1.63
SYNM-202ENST00000336292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.19■■□□□ 1.62
SYNM-202ENST00000336292 C14orf37Q86TY3 774 aa25.09■■□□□ 1.61
SYNM-202ENST00000336292 RTL5Q5HYW3 569 aaPredicted RBP25.08■■□□□ 1.6
SYNM-202ENST00000336292 DIEXFQ68CQ4 756 aaKnown RBP25.04■■□□□ 1.6
SYNM-202ENST00000336292 SALL2Q9Y467 1007 aaPredicted RBP25.03■■□□□ 1.6
SYNM-202ENST00000336292 ANP32CO43423 234 aa24.99■■□□□ 1.59
SYNM-202ENST00000336292 ARID4BQ4LE39 1312 aaPredicted RBP24.94■■□□□ 1.58
SYNM-202ENST00000336292 ARXQ96QS3 562 aa24.88■■□□□ 1.57
SYNM-202ENST00000336292 HAP1P54257 671 aaPredicted RBP24.88■■□□□ 1.57
SYNM-202ENST00000336292 CHIC2Q9UKJ5 165 aa24.85■■□□□ 1.57
SYNM-202ENST00000336292 NPM2Q86SE8 214 aaKnown RBP24.85■■□□□ 1.57
SYNM-202ENST00000336292 TRHP20396 242 aaPredicted RBP24.83■■□□□ 1.57
SYNM-202ENST00000336292 KCNH8Q96L42 1107 aa24.83■■□□□ 1.57
SYNM-202ENST00000336292 KDM2AQ9Y2K7 1162 aa24.8■■□□□ 1.56
SYNM-202ENST00000336292 TULP1O00294 542 aaPredicted RBP24.79■■□□□ 1.56
SYNM-202ENST00000336292 CDK11AQ9UQ88 783 aaPredicted RBP24.73■■□□□ 1.55
SYNM-202ENST00000336292 SCRIBQ14160 1630 aa24.7■■□□□ 1.54
SYNM-202ENST00000336292 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
SYNM-202ENST00000336292 LMOD2Q6P5Q4 547 aa24.65■■□□□ 1.54
SYNM-202ENST00000336292 PPP1R15AO75807 674 aaPredicted RBP24.65■■□□□ 1.54
SYNM-202ENST00000336292 HSP90AA1P07900 732 aaKnown RBP24.6■■□□□ 1.53
SYNM-202ENST00000336292 SENP3-EIF4A1A0A087X0R7 540 aa24.56■■□□□ 1.52
SYNM-202ENST00000336292 FAM9BQ8IZU0 186 aa24.55■■□□□ 1.52
SYNM-202ENST00000336292 TAOK2Q9UL54 1235 aa24.52■■□□□ 1.52
SYNM-202ENST00000336292 NPHP1O15259 732 aa24.52■■□□□ 1.52
SYNM-202ENST00000336292 PPM1GO15355 546 aaPredicted RBP24.47■■□□□ 1.51
SYNM-202ENST00000336292 TMC1Q8TDI8 760 aa24.43■■□□□ 1.5
SYNM-202ENST00000336292 MLECQ14165 292 aa24.42■■□□□ 1.5
SYNM-202ENST00000336292 HIRIP3Q9BW71 556 aaPredicted RBP24.41■■□□□ 1.5
SYNM-202ENST00000336292 TPRNQ4KMQ1 711 aa24.37■■□□□ 1.49
SYNM-202ENST00000336292 NCBP3Q53F19 620 aaKnown RBP24.37■■□□□ 1.49
SYNM-202ENST00000336292 RGL3Q3MIN7 710 aa24.36■■□□□ 1.49
SYNM-202ENST00000336292 GTF3C3Q9Y5Q9 886 aa24.36■■□□□ 1.49
SYNM-202ENST00000336292 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
SYNM-202ENST00000336292 TONSLQ96HA7 1378 aa24.33■■□□□ 1.49
SYNM-202ENST00000336292 TSPY4P0CV99 314 aa24.32■■□□□ 1.48
SYNM-202ENST00000336292 TSPY10P0CW01 314 aa24.32■■□□□ 1.48
SYNM-202ENST00000336292 WDR43Q15061 677 aaKnown RBP eCLIP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms