RNA–Protein interactions for RNA: ENST00000309889.2

TCAP-201, Transcript of titin-cap, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCAP, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCAP-201ENST00000309889 NISCHQ9Y2I1 1504 aa38.35■■■■□ 3.73
TCAP-201ENST00000309889 CCDC180Q9P1Z9 1646 aa32.68■■■□□ 2.82
TCAP-201ENST00000309889 SHROOM4Q9ULL8 1493 aa32.52■■■□□ 2.8
TCAP-201ENST00000309889 ZCCHC6Q5VYS8 1495 aaKnown RBP32.48■■■□□ 2.79
TCAP-201ENST00000309889 SUPT5HO00267 1087 aaKnown RBP31.96■■■□□ 2.71
TCAP-201ENST00000309889 DCAF1Q9Y4B6 1507 aa31.58■■■□□ 2.65
TCAP-201ENST00000309889 DCAF8L2P0C7V8 631 aa31.46■■■□□ 2.63
TCAP-201ENST00000309889 CHIC1Q5VXU3 224 aa31.25■■■□□ 2.59
TCAP-201ENST00000309889 MYO15BQ96JP2 1530 aa31.15■■■□□ 2.58
TCAP-201ENST00000309889 ABCC9O60706 1549 aa30.69■■■□□ 2.5
TCAP-201ENST00000309889 HRCP23327 699 aa30.52■■■□□ 2.48
TCAP-201ENST00000309889 SCRIBQ14160 1630 aa30.45■■■□□ 2.47
TCAP-201ENST00000309889 RSF1Q96T23 1441 aaPredicted RBP30.34■■■□□ 2.45
TCAP-201ENST00000309889 PCGF6Q9BYE7 350 aa30.31■■■□□ 2.44
TCAP-201ENST00000309889 LOC105371045A0A1W2PR82 267 aa30.22■■■□□ 2.43
TCAP-201ENST00000309889 NACADO15069 1562 aa30.12■■■□□ 2.41
TCAP-201ENST00000309889 RB1CC1Q8TDY2 1594 aa30.11■■■□□ 2.41
TCAP-201ENST00000309889 TRIM41Q8WV44 630 aa29.86■■■□□ 2.37
TCAP-201ENST00000309889 TRIM26Q12899 539 aaPredicted RBP29.84■■■□□ 2.37
TCAP-201ENST00000309889 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
TCAP-201ENST00000309889 MROH2BQ7Z745 1585 aa29.76■■■□□ 2.36
TCAP-201ENST00000309889 PPARGC1BQ86YN6 1023 aaKnown RBP29.7■■■□□ 2.35
TCAP-201ENST00000309889 WIZO95785 1651 aa29.62■■■□□ 2.33
TCAP-201ENST00000309889 BAZ1AQ9NRL2 1556 aaPredicted RBP29.54■■■□□ 2.32
TCAP-201ENST00000309889 FAM9AQ8IZU1 332 aaPredicted RBP29.49■■■□□ 2.31
TCAP-201ENST00000309889 EIF4G1Q04637 1599 aaKnown RBP29.38■■■□□ 2.29
TCAP-201ENST00000309889 ZEB1P37275 1124 aaPredicted RBP29.32■■■□□ 2.28
TCAP-201ENST00000309889 TOP2AP11388 1531 aaKnown RBP29.23■■■□□ 2.27
TCAP-201ENST00000309889 SMARCA4P51532 1647 aa29.2■■■□□ 2.26
TCAP-201ENST00000309889 UNC13AQ9UPW8 1703 aa29.15■■■□□ 2.26
TCAP-201ENST00000309889 EHMT2Q96KQ7 1210 aa29.12■■■□□ 2.25
TCAP-201ENST00000309889 SMARCA2P51531 1590 aa29.05■■■□□ 2.24
TCAP-201ENST00000309889 CCDC88BA6NC98 1476 aa29.04■■■□□ 2.24
TCAP-201ENST00000309889 ABCC8Q09428 1581 aa28.95■■■□□ 2.23
TCAP-201ENST00000309889 WRNQ14191 1432 aaPredicted RBP eCLIP28.76■■■□□ 2.19
TCAP-201ENST00000309889 BICRAQ9NZM4 1560 aa28.75■■■□□ 2.19
TCAP-201ENST00000309889 EEA1Q15075 1411 aa28.74■■■□□ 2.19
TCAP-201ENST00000309889 PEG3Q9GZU2 1588 aa28.7■■■□□ 2.18
TCAP-201ENST00000309889 SOGA1O94964 1423 aa28.69■■■□□ 2.18
TCAP-201ENST00000309889 CEP162Q5TB80 1403 aa28.67■■■□□ 2.18
TCAP-201ENST00000309889 TNIKQ9UKE5 1360 aa28.66■■■□□ 2.18
TCAP-201ENST00000309889 CSRNP3Q8WYN3 585 aa28.57■■■□□ 2.16
TCAP-201ENST00000309889 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
TCAP-201ENST00000309889 RUSC2Q8N2Y8 1516 aa28.53■■■□□ 2.16
TCAP-201ENST00000309889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.5■■■□□ 2.15
TCAP-201ENST00000309889 GOLGA3Q08378 1498 aa28.49■■■□□ 2.15
TCAP-201ENST00000309889 CCER1Q8TC90 406 aaPredicted RBP28.49■■■□□ 2.15
TCAP-201ENST00000309889 UBTFP17480 764 aaKnown RBP28.39■■■□□ 2.14
TCAP-201ENST00000309889 ATAD2BQ9ULI0 1458 aa28.38■■■□□ 2.13
TCAP-201ENST00000309889 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
TCAP-201ENST00000309889 KIF21BO75037 1637 aa28.34■■■□□ 2.13
TCAP-201ENST00000309889 CEP164Q9UPV0 1460 aa28.32■■■□□ 2.12
TCAP-201ENST00000309889 BAZ1BQ9UIG0 1483 aaKnown RBP28.3■■■□□ 2.12
TCAP-201ENST00000309889 TTBK1Q5TCY1 1321 aaPredicted RBP28.25■■■□□ 2.11
TCAP-201ENST00000309889 SCAF1Q9H7N4 1312 aaKnown RBP28.12■■■□□ 2.09
TCAP-201ENST00000309889 CLIP1P30622 1438 aa28.11■■■□□ 2.09
TCAP-201ENST00000309889 TOP2BQ02880 1626 aa28.07■■■□□ 2.08
TCAP-201ENST00000309889 VPS8Q8N3P4 1428 aa28.04■■■□□ 2.08
TCAP-201ENST00000309889 RAPGEF2Q9Y4G8 1499 aa28.01■■■□□ 2.07
TCAP-201ENST00000309889 BIVM-ERCC5R4GMW8 1640 aa28.01■■■□□ 2.07
TCAP-201ENST00000309889 DIEXFQ68CQ4 756 aaKnown RBP28.01■■■□□ 2.07
TCAP-201ENST00000309889 HMGXB3Q12766 1538 aa27.89■■■□□ 2.06
TCAP-201ENST00000309889 ACIN1Q9UKV3 1341 aaKnown RBP27.89■■■□□ 2.05
TCAP-201ENST00000309889 ERICH3Q5RHP9 1530 aa27.87■■■□□ 2.05
TCAP-201ENST00000309889 NCAPD3P42695 1498 aa27.84■■■□□ 2.05
TCAP-201ENST00000309889 APLP2Q06481 763 aa27.83■■■□□ 2.05
TCAP-201ENST00000309889 ZNF316A6NFI3 1004 aaPredicted RBP27.83■■■□□ 2.05
TCAP-201ENST00000309889 PELP1Q8IZL8 1130 aaKnown RBP27.83■■■□□ 2.05
TCAP-201ENST00000309889 PRXQ9BXM0 1461 aa27.8■■■□□ 2.04
TCAP-201ENST00000309889 HNRNPUL2Q1KMD3 747 aaKnown RBP27.8■■■□□ 2.04
TCAP-201ENST00000309889 NEUROD1Q13562 356 aa27.77■■■□□ 2.04
TCAP-201ENST00000309889 CENPBP07199 599 aaPredicted RBP27.75■■■□□ 2.03
TCAP-201ENST00000309889 CUX1P39880 1505 aa27.72■■■□□ 2.03
TCAP-201ENST00000309889 ARAP1Q96P48 1450 aa27.67■■■□□ 2.02
TCAP-201ENST00000309889 RANGAP1P46060 587 aaPredicted RBP27.65■■■□□ 2.02
TCAP-201ENST00000309889 CFTRP13569 1480 aa27.64■■■□□ 2.02
TCAP-201ENST00000309889 KIF27Q86VH2 1401 aa27.63■■■□□ 2.01
TCAP-201ENST00000309889 PRDM2Q13029 1718 aa27.54■■■□□ 2
TCAP-201ENST00000309889 GTF3C3Q9Y5Q9 886 aa27.5■■□□□ 1.99
TCAP-201ENST00000309889 CLSPNQ9HAW4 1339 aa27.5■■□□□ 1.99
TCAP-201ENST00000309889 RRBP1Q9P2E9 1410 aaKnown RBP27.43■■□□□ 1.98
TCAP-201ENST00000309889 KANK4Q5T7N3 995 aaPredicted RBP27.43■■□□□ 1.98
TCAP-201ENST00000309889 DHX57Q6P158 1386 aaKnown RBP27.41■■□□□ 1.98
TCAP-201ENST00000309889 ARHGAP35Q9NRY4 1499 aa27.41■■□□□ 1.98
TCAP-201ENST00000309889 MIER1Q8N108 512 aa27.37■■□□□ 1.97
TCAP-201ENST00000309889 CUX2O14529 1486 aa27.33■■□□□ 1.97
TCAP-201ENST00000309889 IGF1RP08069 1367 aa27.28■■□□□ 1.96
TCAP-201ENST00000309889 CADPSQ9ULU8 1353 aa27.27■■□□□ 1.96
TCAP-201ENST00000309889 CCNB3Q8WWL7 1395 aa27.26■■□□□ 1.95
TCAP-201ENST00000309889 YTHDC1Q96MU7 727 aaKnown RBP27.24■■□□□ 1.95
TCAP-201ENST00000309889 MAP3K1Q13233 1512 aa27.23■■□□□ 1.95
TCAP-201ENST00000309889 FGD5Q6ZNL6 1462 aa27.2■■□□□ 1.94
TCAP-201ENST00000309889 TIAM1Q13009 1591 aa27.18■■□□□ 1.94
TCAP-201ENST00000309889 CARMIL1Q5VZK9 1371 aa27.17■■□□□ 1.94
TCAP-201ENST00000309889 LRRC9Q6ZRR7 1453 aa27.04■■□□□ 1.92
TCAP-201ENST00000309889 FHAD1B1AJZ9 1412 aa27.02■■□□□ 1.92
TCAP-201ENST00000309889 CC2D2AQ9P2K1 1620 aa27.02■■□□□ 1.92
TCAP-201ENST00000309889 CFAP43Q8NDM7 1665 aa27.01■■□□□ 1.92
TCAP-201ENST00000309889 FANCD2Q9BXW9 1451 aa27.01■■□□□ 1.91
TCAP-201ENST00000309889 RAB3GAP2Q9H2M9 1393 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms