RNA–Protein interactions for RNA: ENST00000359928.8

PML-204, Transcript of promyelocytic leukemia, humanhuman

TSL 1 (best) BASIC

Gene PML, Length 1,726 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-204ENST00000359928 NISCHQ9Y2I1 1504 aa44.99■■■■■ 4.79
PML-204ENST00000359928 CCDC180Q9P1Z9 1646 aa39.64■■■■□ 3.94
PML-204ENST00000359928 ABCC9O60706 1549 aa38.02■■■■□ 3.68
PML-204ENST00000359928 ZCCHC6Q5VYS8 1495 aaKnown RBP37.66■■■■□ 3.62
PML-204ENST00000359928 DCAF8L2P0C7V8 631 aa37.37■■■■□ 3.57
PML-204ENST00000359928 DCAF1Q9Y4B6 1507 aa37.2■■■■□ 3.55
PML-204ENST00000359928 NACADO15069 1562 aa37.03■■■■□ 3.52
PML-204ENST00000359928 MYO15BQ96JP2 1530 aa37.02■■■■□ 3.52
PML-204ENST00000359928 RB1CC1Q8TDY2 1594 aa36.91■■■■□ 3.5
PML-204ENST00000359928 SHROOM4Q9ULL8 1493 aa36.48■■■■□ 3.43
PML-204ENST00000359928 SCRIBQ14160 1630 aa36.32■■■■□ 3.4
PML-204ENST00000359928 UNC13AQ9UPW8 1703 aa36.18■■■■□ 3.38
PML-204ENST00000359928 BICRAQ9NZM4 1560 aa35.74■■■■□ 3.31
PML-204ENST00000359928 PABPN1Q86U42 306 aaKnown RBP eCLIP35.68■■■■□ 3.3
PML-204ENST00000359928 SUPT5HO00267 1087 aaKnown RBP35.05■■■■□ 3.2
PML-204ENST00000359928 CECR2Q9BXF3 1484 aa34.97■■■■□ 3.19
PML-204ENST00000359928 BAZ1AQ9NRL2 1556 aaPredicted RBP34.82■■■■□ 3.17
PML-204ENST00000359928 SMARCA4P51532 1647 aa34.77■■■■□ 3.16
PML-204ENST00000359928 EIF4G1Q04637 1599 aaKnown RBP34.75■■■■□ 3.15
PML-204ENST00000359928 RSF1Q96T23 1441 aaPredicted RBP34.73■■■■□ 3.15
PML-204ENST00000359928 MROH2BQ7Z745 1585 aa34.72■■■■□ 3.15
PML-204ENST00000359928 WIZO95785 1651 aa34.44■■■■□ 3.1
PML-204ENST00000359928 CC2D2AQ9P2K1 1620 aa34.42■■■■□ 3.1
PML-204ENST00000359928 PEG3Q9GZU2 1588 aa34.34■■■■□ 3.09
PML-204ENST00000359928 SMARCA2P51531 1590 aa34.33■■■■□ 3.09
PML-204ENST00000359928 ATAD2BQ9ULI0 1458 aa34.32■■■■□ 3.08
PML-204ENST00000359928 NCAPD3P42695 1498 aa34.12■■■■□ 3.05
PML-204ENST00000359928 BAZ1BQ9UIG0 1483 aaKnown RBP34.12■■■■□ 3.05
PML-204ENST00000359928 HMGXB3Q12766 1538 aa34.07■■■■□ 3.05
PML-204ENST00000359928 TOP2AP11388 1531 aaKnown RBP34.07■■■■□ 3.04
PML-204ENST00000359928 DNAJC5BQ9UF47 199 aa34.06■■■■□ 3.04
PML-204ENST00000359928 CCDC88BA6NC98 1476 aa33.66■■■□□ 2.98
PML-204ENST00000359928 CHIC1Q5VXU3 224 aa33.5■■■□□ 2.95
PML-204ENST00000359928 CADPSQ9ULU8 1353 aa33.21■■■□□ 2.91
PML-204ENST00000359928 CFTRP13569 1480 aa33.19■■■□□ 2.9
PML-204ENST00000359928 NESP48681 1621 aa33.15■■■□□ 2.9
PML-204ENST00000359928 LAMC3Q9Y6N6 1575 aa33.15■■■□□ 2.9
PML-204ENST00000359928 PRDM2Q13029 1718 aa33.13■■■□□ 2.89
PML-204ENST00000359928 TRIM41Q8WV44 630 aa32.97■■■□□ 2.87
PML-204ENST00000359928 ABCC8Q09428 1581 aa32.9■■■□□ 2.86
PML-204ENST00000359928 PDS5BQ9NTI5 1447 aa32.89■■■□□ 2.86
PML-204ENST00000359928 FANCD2Q9BXW9 1451 aa32.87■■■□□ 2.85
PML-204ENST00000359928 KIF21AQ7Z4S6 1674 aa32.83■■■□□ 2.85
PML-204ENST00000359928 CEP164Q9UPV0 1460 aa32.76■■■□□ 2.83
PML-204ENST00000359928 ERCC6Q03468 1493 aa32.71■■■□□ 2.83
PML-204ENST00000359928 WRNQ14191 1432 aaPredicted RBP eCLIP32.7■■■□□ 2.83
PML-204ENST00000359928 SYNJ1O43426 1573 aa32.58■■■□□ 2.81
PML-204ENST00000359928 CUX1P39880 1505 aa32.52■■■□□ 2.8
PML-204ENST00000359928 MRC2Q9UBG0 1479 aa32.51■■■□□ 2.8
PML-204ENST00000359928 URB2Q14146 1524 aaKnown RBP32.48■■■□□ 2.79
PML-204ENST00000359928 DNMBPQ6XZF7 1577 aa32.48■■■□□ 2.79
PML-204ENST00000359928 TOP2BQ02880 1626 aa32.47■■■□□ 2.79
PML-204ENST00000359928 BIVM-ERCC5R4GMW8 1640 aa32.46■■■□□ 2.79
PML-204ENST00000359928 THOC2Q8NI27 1593 aaKnown RBP32.44■■■□□ 2.78
PML-204ENST00000359928 TOPBP1Q92547 1522 aa32.44■■■□□ 2.78
PML-204ENST00000359928 WDR62O43379 1518 aa32.37■■■□□ 2.77
PML-204ENST00000359928 FAM9AQ8IZU1 332 aaPredicted RBP32.35■■■□□ 2.77
PML-204ENST00000359928 FGD5Q6ZNL6 1462 aa32.28■■■□□ 2.76
PML-204ENST00000359928 SOGA1O94964 1423 aa32.25■■■□□ 2.75
PML-204ENST00000359928 POLA1P09884 1462 aaPredicted RBP32.22■■■□□ 2.75
PML-204ENST00000359928 EEA1Q15075 1411 aa32.21■■■□□ 2.75
PML-204ENST00000359928 LOC105371045A0A1W2PR82 267 aa32.2■■■□□ 2.75
PML-204ENST00000359928 RUSC2Q8N2Y8 1516 aa32.13■■■□□ 2.73
PML-204ENST00000359928 RAD54L2Q9Y4B4 1467 aa32.1■■■□□ 2.73
PML-204ENST00000359928 CUX2O14529 1486 aa32.07■■■□□ 2.72
PML-204ENST00000359928 TARBP1Q13395 1621 aaKnown RBP32.01■■■□□ 2.72
PML-204ENST00000359928 IFT140Q96RY7 1462 aa32■■■□□ 2.71
PML-204ENST00000359928 CSRNP3Q8WYN3 585 aa31.99■■■□□ 2.71
PML-204ENST00000359928 WDR97A6NE52 1622 aa31.99■■■□□ 2.71
PML-204ENST00000359928 ABCA10Q8WWZ4 1543 aa31.97■■■□□ 2.71
PML-204ENST00000359928 EHMT2Q96KQ7 1210 aa31.89■■■□□ 2.7
PML-204ENST00000359928 KIF27Q86VH2 1401 aa31.88■■■□□ 2.69
PML-204ENST00000359928 TDRD9Q8NDG6 1382 aaKnown RBP31.84■■■□□ 2.69
PML-204ENST00000359928 ZNF608Q9ULD9 1512 aaPredicted RBP31.82■■■□□ 2.68
PML-204ENST00000359928 KIF21BO75037 1637 aa31.8■■■□□ 2.68
PML-204ENST00000359928 ABCA5Q8WWZ7 1642 aa31.8■■■□□ 2.68
PML-204ENST00000359928 GOLGA3Q08378 1498 aa31.77■■■□□ 2.68
PML-204ENST00000359928 EIF4G3O43432 1585 aaKnown RBP31.76■■■□□ 2.67
PML-204ENST00000359928 AQRO60306 1485 aaKnown RBP eCLIP31.75■■■□□ 2.671e-6■■■■■ 29.8
PML-204ENST00000359928 GAPVD1Q14C86 1478 aa31.75■■■□□ 2.67
PML-204ENST00000359928 PBRM1Q86U86 1689 aa31.71■■■□□ 2.67
PML-204ENST00000359928 PRXQ9BXM0 1461 aa31.65■■■□□ 2.66
PML-204ENST00000359928 TNIKQ9UKE5 1360 aa31.62■■■□□ 2.65
PML-204ENST00000359928 RAPGEF2Q9Y4G8 1499 aa31.62■■■□□ 2.65
PML-204ENST00000359928 ERICH3Q5RHP9 1530 aa31.61■■■□□ 2.65
PML-204ENST00000359928 GRIN2BQ13224 1484 aa31.61■■■□□ 2.65
PML-204ENST00000359928 IGF1RP08069 1367 aa31.6■■■□□ 2.65
PML-204ENST00000359928 UBTFP17480 764 aaKnown RBP31.58■■■□□ 2.65
PML-204ENST00000359928 CUL7Q14999 1698 aa31.54■■■□□ 2.64
PML-204ENST00000359928 SNAPC4Q5SXM2 1469 aa31.49■■■□□ 2.63
PML-204ENST00000359928 CARMIL1Q5VZK9 1371 aa31.47■■■□□ 2.63
PML-204ENST00000359928 CEP162Q5TB80 1403 aa31.47■■■□□ 2.63
PML-204ENST00000359928 ADAMTS12P58397 1594 aa31.45■■■□□ 2.62
PML-204ENST00000359928 MAGI1Q96QZ7 1491 aaPredicted RBP31.43■■■□□ 2.62
PML-204ENST00000359928 FHAD1B1AJZ9 1412 aa31.39■■■□□ 2.62
PML-204ENST00000359928 SYNJ2O15056 1496 aa31.31■■■□□ 2.6
PML-204ENST00000359928 FBLN2P98095 1184 aa31.27■■■□□ 2.6
PML-204ENST00000359928 CHMP7Q8WUX9 453 aaPredicted RBP31.27■■■□□ 2.6
PML-204ENST00000359928 CHD1O14646 1710 aa31.25■■■□□ 2.59
PML-204ENST00000359928 CLIP1P30622 1438 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms