RNA–Protein interactions for RNA: ENST00000338502.8

SPRED3-201, Transcript of sprouty related EVH1 domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED3, Length 4,778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-201ENST00000338502 DCAF8L2P0C7V8 631 aa30.92■■■□□ 2.54
SPRED3-201ENST00000338502 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
SPRED3-201ENST00000338502 SUPT5HO00267 1087 aaKnown RBP29.74■■■□□ 2.35
SPRED3-201ENST00000338502 SHROOM4Q9ULL8 1493 aa29.18■■■□□ 2.26
SPRED3-201ENST00000338502 EHMT2Q96KQ7 1210 aa28.42■■■□□ 2.14
SPRED3-201ENST00000338502 APLP2Q06481 763 aa28.07■■■□□ 2.08
SPRED3-201ENST00000338502 PELP1Q8IZL8 1130 aaKnown RBP27.97■■■□□ 2.07
SPRED3-201ENST00000338502 FAM9AQ8IZU1 332 aaPredicted RBP27.96■■■□□ 2.07
SPRED3-201ENST00000338502 PCGF6Q9BYE7 350 aa27.93■■■□□ 2.06
SPRED3-201ENST00000338502 TRIM41Q8WV44 630 aa27.61■■■□□ 2.01
SPRED3-201ENST00000338502 ZEB1P37275 1124 aaPredicted RBP27.56■■■□□ 2
SPRED3-201ENST00000338502 TTBK1Q5TCY1 1321 aaPredicted RBP27.52■■■□□ 2
SPRED3-201ENST00000338502 CCER1Q8TC90 406 aaPredicted RBP27.31■■□□□ 1.96
SPRED3-201ENST00000338502 CENPBP07199 599 aaPredicted RBP27.31■■□□□ 1.96
SPRED3-201ENST00000338502 RANGAP1P46060 587 aaPredicted RBP27.18■■□□□ 1.94
SPRED3-201ENST00000338502 UBTFP17480 764 aaKnown RBP27.16■■□□□ 1.94
SPRED3-201ENST00000338502 ATP1B4Q9UN42 357 aaPredicted RBP26.91■■□□□ 1.9
SPRED3-201ENST00000338502 TRIM26Q12899 539 aaPredicted RBP26.88■■□□□ 1.89
SPRED3-201ENST00000338502 CHIC1Q5VXU3 224 aa26.76■■□□□ 1.87
SPRED3-201ENST00000338502 HRCP23327 699 aa26.72■■□□□ 1.87
SPRED3-201ENST00000338502 PPARGC1BQ86YN6 1023 aaKnown RBP26.69■■□□□ 1.86
SPRED3-201ENST00000338502 ERICH6Q7L0X2 663 aa26.64■■□□□ 1.86
SPRED3-201ENST00000338502 LOC105371045A0A1W2PR82 267 aa26.57■■□□□ 1.84
SPRED3-201ENST00000338502 NEFLP07196 543 aa26.57■■□□□ 1.84
SPRED3-201ENST00000338502 YTHDC1Q96MU7 727 aaKnown RBP26.55■■□□□ 1.84
SPRED3-201ENST00000338502 MYT1Q01538 1121 aa26.26■■□□□ 1.79
SPRED3-201ENST00000338502 ITGAEP38570 1179 aa26.19■■□□□ 1.78
SPRED3-201ENST00000338502 HNRNPUL2Q1KMD3 747 aaKnown RBP26.18■■□□□ 1.78
SPRED3-201ENST00000338502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.96■■□□□ 1.75
SPRED3-201ENST00000338502 DIEXFQ68CQ4 756 aaKnown RBP25.86■■□□□ 1.73
SPRED3-201ENST00000338502 POLR3GLQ9BT43 218 aa25.81■■□□□ 1.72
SPRED3-201ENST00000338502 ABCC9O60706 1549 aa25.72■■□□□ 1.71
SPRED3-201ENST00000338502 MYT1LQ9UL68 1186 aa25.68■■□□□ 1.7
SPRED3-201ENST00000338502 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.69
SPRED3-201ENST00000338502 DAXXQ9UER7 740 aaPredicted RBP25.6■■□□□ 1.69
SPRED3-201ENST00000338502 FAM50AQ14320 339 aaKnown RBP25.59■■□□□ 1.69
SPRED3-201ENST00000338502 CNGB1Q14028 1251 aaPredicted RBP25.53■■□□□ 1.68
SPRED3-201ENST00000338502 TRIM52Q96A61 297 aa25.39■■□□□ 1.65
SPRED3-201ENST00000338502 CSRNP3Q8WYN3 585 aa25.38■■□□□ 1.65
SPRED3-201ENST00000338502 NEUROD1Q13562 356 aa25.37■■□□□ 1.65
SPRED3-201ENST00000338502 ZNF316A6NFI3 1004 aaPredicted RBP25.33■■□□□ 1.65
SPRED3-201ENST00000338502 GTF3C3Q9Y5Q9 886 aa25.3■■□□□ 1.64
SPRED3-201ENST00000338502 ANP32CO43423 234 aa25.24■■□□□ 1.63
SPRED3-201ENST00000338502 SLC4A1APQ9BWU0 796 aaKnown RBP25.18■■□□□ 1.62
SPRED3-201ENST00000338502 ZCCHC6Q5VYS8 1495 aaKnown RBP25.17■■□□□ 1.62
SPRED3-201ENST00000338502 RTL5Q5HYW3 569 aaPredicted RBP25.13■■□□□ 1.61
SPRED3-201ENST00000338502 CLSPNQ9HAW4 1339 aa25.11■■□□□ 1.61
SPRED3-201ENST00000338502 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
SPRED3-201ENST00000338502 ACIN1Q9UKV3 1341 aaKnown RBP25.06■■□□□ 1.6
SPRED3-201ENST00000338502 BCANQ96GW7 911 aa25.05■■□□□ 1.6
SPRED3-201ENST00000338502 ZNF326Q5BKZ1 582 aaKnown RBP25.03■■□□□ 1.6
SPRED3-201ENST00000338502 P3H3Q8IVL6 736 aa24.98■■□□□ 1.59
SPRED3-201ENST00000338502 CDK11AQ9UQ88 783 aaPredicted RBP24.95■■□□□ 1.58
SPRED3-201ENST00000338502 SCRIBQ14160 1630 aa24.93■■□□□ 1.58
SPRED3-201ENST00000338502 FBLN2P98095 1184 aa24.92■■□□□ 1.58
SPRED3-201ENST00000338502 ARID3CA6NKF2 412 aa24.75■■□□□ 1.55
SPRED3-201ENST00000338502 TONSLQ96HA7 1378 aa24.7■■□□□ 1.54
SPRED3-201ENST00000338502 CCDC180Q9P1Z9 1646 aa24.66■■□□□ 1.54
SPRED3-201ENST00000338502 ZNF777Q9ULD5 760 aaPredicted RBP24.66■■□□□ 1.54
SPRED3-201ENST00000338502 ZBTB47Q9UFB7 747 aaPredicted RBP24.59■■□□□ 1.53
SPRED3-201ENST00000338502 CANXP27824 592 aaKnown RBP24.57■■□□□ 1.52
SPRED3-201ENST00000338502 DDX10Q13206 875 aaKnown RBP24.56■■□□□ 1.52
SPRED3-201ENST00000338502 FKBP8Q14318 412 aa24.52■■□□□ 1.52
SPRED3-201ENST00000338502 ANP32AP39687 249 aaKnown RBP24.51■■□□□ 1.51
SPRED3-201ENST00000338502 NEFMP07197 916 aa24.5■■□□□ 1.51
SPRED3-201ENST00000338502 HNRNPUQ00839 825 aaKnown RBP eCLIP24.49■■□□□ 1.51
SPRED3-201ENST00000338502 CLIP1P30622 1438 aa24.47■■□□□ 1.51
SPRED3-201ENST00000338502 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.51
SPRED3-201ENST00000338502 EEA1Q15075 1411 aa24.44■■□□□ 1.5
SPRED3-201ENST00000338502 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
SPRED3-201ENST00000338502 FAM9BQ8IZU0 186 aa24.36■■□□□ 1.49
SPRED3-201ENST00000338502 CHIC2Q9UKJ5 165 aa24.36■■□□□ 1.49
SPRED3-201ENST00000338502 MTUS2Q5JR59 1369 aa24.35■■□□□ 1.49
SPRED3-201ENST00000338502 MIER1Q8N108 512 aa24.32■■□□□ 1.48
SPRED3-201ENST00000338502 CEP162Q5TB80 1403 aa24.3■■□□□ 1.48
SPRED3-201ENST00000338502 GOLGA3Q08378 1498 aa24.29■■□□□ 1.48
SPRED3-201ENST00000338502 NPM2Q86SE8 214 aaKnown RBP24.27■■□□□ 1.48
SPRED3-201ENST00000338502 TMC1Q8TDI8 760 aa24.27■■□□□ 1.48
SPRED3-201ENST00000338502 TSPY4P0CV99 314 aa24.25■■□□□ 1.47
SPRED3-201ENST00000338502 TSPY10P0CW01 314 aa24.25■■□□□ 1.47
SPRED3-201ENST00000338502 BCL11AQ9H165 835 aa24.22■■□□□ 1.47
SPRED3-201ENST00000338502 SCAF1Q9H7N4 1312 aaKnown RBP24.22■■□□□ 1.47
SPRED3-201ENST00000338502 SLC24A1O60721 1099 aa24.22■■□□□ 1.47
SPRED3-201ENST00000338502 MRS2Q9HD23 443 aa24.21■■□□□ 1.47
SPRED3-201ENST00000338502 CHGAP10645 457 aaKnown RBP24.19■■□□□ 1.46
SPRED3-201ENST00000338502 RB1CC1Q8TDY2 1594 aa24.19■■□□□ 1.46
SPRED3-201ENST00000338502 WRNQ14191 1432 aaPredicted RBP eCLIP24.19■■□□□ 1.46
SPRED3-201ENST00000338502 TNIKQ9UKE5 1360 aa24.18■■□□□ 1.46
SPRED3-201ENST00000338502 CCDC136Q96JN2 1154 aa24.17■■□□□ 1.46
SPRED3-201ENST00000338502 EIF4G2P78344 907 aaKnown RBP eCLIP24.15■■□□□ 1.46
SPRED3-201ENST00000338502 SALL2Q9Y467 1007 aaPredicted RBP24.13■■□□□ 1.45
SPRED3-201ENST00000338502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.12■■□□□ 1.45
SPRED3-201ENST00000338502 NPM1P06748 294 aaKnown RBP eCLIP24.11■■□□□ 1.45
SPRED3-201ENST00000338502 ESF1Q9H501 851 aaKnown RBP24.1■■□□□ 1.45
SPRED3-201ENST00000338502 UPF2Q9HAU5 1272 aaKnown RBP24.09■■□□□ 1.45
SPRED3-201ENST00000338502 HIRIP3Q9BW71 556 aaPredicted RBP24.09■■□□□ 1.45
SPRED3-201ENST00000338502 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.08■■□□□ 1.45
SPRED3-201ENST00000338502 NACADO15069 1562 aa24.08■■□□□ 1.44
SPRED3-201ENST00000338502 KDM2AQ9Y2K7 1162 aa24.07■■□□□ 1.44
SPRED3-201ENST00000338502 STAG3Q9UJ98 1225 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms