RNA–Protein interactions for RNA: ENST00000338502.8

SPRED3-201, Transcript of sprouty related EVH1 domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED3, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-201ENST00000338502 DCAF8L2P0C7V8 631 aa30.92■■■□□ 2.54
SPRED3-201ENST00000338502 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
SPRED3-201ENST00000338502 SUPT5HO00267 1087 aaKnown RBP29.74■■■□□ 2.35
SPRED3-201ENST00000338502 SHROOM4Q9ULL8 1493 aa29.18■■■□□ 2.26
SPRED3-201ENST00000338502 EHMT2Q96KQ7 1210 aa28.42■■■□□ 2.14
SPRED3-201ENST00000338502 APLP2Q06481 763 aa28.07■■■□□ 2.08
SPRED3-201ENST00000338502 PELP1Q8IZL8 1130 aaKnown RBP27.97■■■□□ 2.07
SPRED3-201ENST00000338502 FAM9AQ8IZU1 332 aaPredicted RBP27.96■■■□□ 2.07
SPRED3-201ENST00000338502 PCGF6Q9BYE7 350 aa27.93■■■□□ 2.06
SPRED3-201ENST00000338502 TRIM41Q8WV44 630 aa27.61■■■□□ 2.01
SPRED3-201ENST00000338502 ZEB1P37275 1124 aaPredicted RBP27.56■■■□□ 2
SPRED3-201ENST00000338502 TTBK1Q5TCY1 1321 aaPredicted RBP27.52■■■□□ 2
SPRED3-201ENST00000338502 CCER1Q8TC90 406 aaPredicted RBP27.31■■□□□ 1.96
SPRED3-201ENST00000338502 CENPBP07199 599 aaPredicted RBP27.31■■□□□ 1.96
SPRED3-201ENST00000338502 RANGAP1P46060 587 aaPredicted RBP27.18■■□□□ 1.94
SPRED3-201ENST00000338502 UBTFP17480 764 aaKnown RBP27.16■■□□□ 1.94
SPRED3-201ENST00000338502 ATP1B4Q9UN42 357 aaPredicted RBP26.91■■□□□ 1.9
SPRED3-201ENST00000338502 TRIM26Q12899 539 aaPredicted RBP26.88■■□□□ 1.89
SPRED3-201ENST00000338502 CHIC1Q5VXU3 224 aa26.76■■□□□ 1.87
SPRED3-201ENST00000338502 HRCP23327 699 aa26.72■■□□□ 1.87
SPRED3-201ENST00000338502 PPARGC1BQ86YN6 1023 aaKnown RBP26.69■■□□□ 1.86
SPRED3-201ENST00000338502 ERICH6Q7L0X2 663 aa26.64■■□□□ 1.86
SPRED3-201ENST00000338502 LOC105371045A0A1W2PR82 267 aa26.57■■□□□ 1.84
SPRED3-201ENST00000338502 NEFLP07196 543 aa26.57■■□□□ 1.84
SPRED3-201ENST00000338502 YTHDC1Q96MU7 727 aaKnown RBP26.55■■□□□ 1.84
SPRED3-201ENST00000338502 MYT1Q01538 1121 aa26.26■■□□□ 1.79
SPRED3-201ENST00000338502 ITGAEP38570 1179 aa26.19■■□□□ 1.78
SPRED3-201ENST00000338502 HNRNPUL2Q1KMD3 747 aaKnown RBP26.18■■□□□ 1.78
SPRED3-201ENST00000338502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.96■■□□□ 1.75
SPRED3-201ENST00000338502 DIEXFQ68CQ4 756 aaKnown RBP25.86■■□□□ 1.73
SPRED3-201ENST00000338502 POLR3GLQ9BT43 218 aa25.81■■□□□ 1.72
SPRED3-201ENST00000338502 ABCC9O60706 1549 aa25.72■■□□□ 1.71
SPRED3-201ENST00000338502 MYT1LQ9UL68 1186 aa25.68■■□□□ 1.7
SPRED3-201ENST00000338502 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.69
SPRED3-201ENST00000338502 DAXXQ9UER7 740 aaPredicted RBP25.6■■□□□ 1.69
SPRED3-201ENST00000338502 FAM50AQ14320 339 aaKnown RBP25.59■■□□□ 1.69
SPRED3-201ENST00000338502 CNGB1Q14028 1251 aaPredicted RBP25.53■■□□□ 1.68
SPRED3-201ENST00000338502 TRIM52Q96A61 297 aa25.39■■□□□ 1.65
SPRED3-201ENST00000338502 CSRNP3Q8WYN3 585 aa25.38■■□□□ 1.65
SPRED3-201ENST00000338502 NEUROD1Q13562 356 aa25.37■■□□□ 1.65
SPRED3-201ENST00000338502 ZNF316A6NFI3 1004 aaPredicted RBP25.33■■□□□ 1.65
SPRED3-201ENST00000338502 GTF3C3Q9Y5Q9 886 aa25.3■■□□□ 1.64
SPRED3-201ENST00000338502 ANP32CO43423 234 aa25.24■■□□□ 1.63
SPRED3-201ENST00000338502 SLC4A1APQ9BWU0 796 aaKnown RBP25.18■■□□□ 1.62
SPRED3-201ENST00000338502 ZCCHC6Q5VYS8 1495 aaKnown RBP25.17■■□□□ 1.62
SPRED3-201ENST00000338502 RTL5Q5HYW3 569 aaPredicted RBP25.13■■□□□ 1.61
SPRED3-201ENST00000338502 CLSPNQ9HAW4 1339 aa25.11■■□□□ 1.61
SPRED3-201ENST00000338502 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
SPRED3-201ENST00000338502 ACIN1Q9UKV3 1341 aaKnown RBP25.06■■□□□ 1.6
SPRED3-201ENST00000338502 BCANQ96GW7 911 aa25.05■■□□□ 1.6
SPRED3-201ENST00000338502 ZNF326Q5BKZ1 582 aaKnown RBP25.03■■□□□ 1.6
SPRED3-201ENST00000338502 P3H3Q8IVL6 736 aa24.98■■□□□ 1.59
SPRED3-201ENST00000338502 CDK11AQ9UQ88 783 aaPredicted RBP24.95■■□□□ 1.58
SPRED3-201ENST00000338502 SCRIBQ14160 1630 aa24.93■■□□□ 1.58
SPRED3-201ENST00000338502 FBLN2P98095 1184 aa24.92■■□□□ 1.58
SPRED3-201ENST00000338502 ARID3CA6NKF2 412 aa24.75■■□□□ 1.55
SPRED3-201ENST00000338502 TONSLQ96HA7 1378 aa24.7■■□□□ 1.54
SPRED3-201ENST00000338502 CCDC180Q9P1Z9 1646 aa24.66■■□□□ 1.54
SPRED3-201ENST00000338502 ZNF777Q9ULD5 760 aaPredicted RBP24.66■■□□□ 1.54
SPRED3-201ENST00000338502 ZBTB47Q9UFB7 747 aaPredicted RBP24.59■■□□□ 1.53
SPRED3-201ENST00000338502 CANXP27824 592 aaKnown RBP24.57■■□□□ 1.52
SPRED3-201ENST00000338502 DDX10Q13206 875 aaKnown RBP24.56■■□□□ 1.52
SPRED3-201ENST00000338502 FKBP8Q14318 412 aa24.52■■□□□ 1.52
SPRED3-201ENST00000338502 ANP32AP39687 249 aaKnown RBP24.51■■□□□ 1.51
SPRED3-201ENST00000338502 NEFMP07197 916 aa24.5■■□□□ 1.51
SPRED3-201ENST00000338502 HNRNPUQ00839 825 aaKnown RBP eCLIP24.49■■□□□ 1.51
SPRED3-201ENST00000338502 CLIP1P30622 1438 aa24.47■■□□□ 1.51
SPRED3-201ENST00000338502 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.51
SPRED3-201ENST00000338502 EEA1Q15075 1411 aa24.44■■□□□ 1.5
SPRED3-201ENST00000338502 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
SPRED3-201ENST00000338502 FAM9BQ8IZU0 186 aa24.36■■□□□ 1.49
SPRED3-201ENST00000338502 CHIC2Q9UKJ5 165 aa24.36■■□□□ 1.49
SPRED3-201ENST00000338502 MTUS2Q5JR59 1369 aa24.35■■□□□ 1.49
SPRED3-201ENST00000338502 MIER1Q8N108 512 aa24.32■■□□□ 1.48
SPRED3-201ENST00000338502 CEP162Q5TB80 1403 aa24.3■■□□□ 1.48
SPRED3-201ENST00000338502 GOLGA3Q08378 1498 aa24.29■■□□□ 1.48
SPRED3-201ENST00000338502 NPM2Q86SE8 214 aaKnown RBP24.27■■□□□ 1.48
SPRED3-201ENST00000338502 TMC1Q8TDI8 760 aa24.27■■□□□ 1.48
SPRED3-201ENST00000338502 TSPY4P0CV99 314 aa24.25■■□□□ 1.47
SPRED3-201ENST00000338502 TSPY10P0CW01 314 aa24.25■■□□□ 1.47
SPRED3-201ENST00000338502 BCL11AQ9H165 835 aa24.22■■□□□ 1.47
SPRED3-201ENST00000338502 SCAF1Q9H7N4 1312 aaKnown RBP24.22■■□□□ 1.47
SPRED3-201ENST00000338502 SLC24A1O60721 1099 aa24.22■■□□□ 1.47
SPRED3-201ENST00000338502 MRS2Q9HD23 443 aa24.21■■□□□ 1.47
SPRED3-201ENST00000338502 CHGAP10645 457 aaKnown RBP24.19■■□□□ 1.46
SPRED3-201ENST00000338502 RB1CC1Q8TDY2 1594 aa24.19■■□□□ 1.46
SPRED3-201ENST00000338502 WRNQ14191 1432 aaPredicted RBP eCLIP24.19■■□□□ 1.46
SPRED3-201ENST00000338502 TNIKQ9UKE5 1360 aa24.18■■□□□ 1.46
SPRED3-201ENST00000338502 CCDC136Q96JN2 1154 aa24.17■■□□□ 1.46
SPRED3-201ENST00000338502 EIF4G2P78344 907 aaKnown RBP eCLIP24.15■■□□□ 1.46
SPRED3-201ENST00000338502 SALL2Q9Y467 1007 aaPredicted RBP24.13■■□□□ 1.45
SPRED3-201ENST00000338502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.12■■□□□ 1.45
SPRED3-201ENST00000338502 NPM1P06748 294 aaKnown RBP eCLIP24.11■■□□□ 1.45
SPRED3-201ENST00000338502 ESF1Q9H501 851 aaKnown RBP24.1■■□□□ 1.45
SPRED3-201ENST00000338502 UPF2Q9HAU5 1272 aaKnown RBP24.09■■□□□ 1.45
SPRED3-201ENST00000338502 HIRIP3Q9BW71 556 aaPredicted RBP24.09■■□□□ 1.45
SPRED3-201ENST00000338502 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.08■■□□□ 1.45
SPRED3-201ENST00000338502 NACADO15069 1562 aa24.08■■□□□ 1.44
SPRED3-201ENST00000338502 KDM2AQ9Y2K7 1162 aa24.07■■□□□ 1.44
SPRED3-201ENST00000338502 STAG3Q9UJ98 1225 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms