RNA–Protein interactions for RNA: ENST00000446419.6

COMMD7-202, Transcript of COMM domain containing 7, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene COMMD7, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-202ENST00000446419 NISCHQ9Y2I1 1504 aa47.51■■■■■ 5.2
COMMD7-202ENST00000446419 CCDC180Q9P1Z9 1646 aa42.33■■■■■ 4.37
COMMD7-202ENST00000446419 ABCC9O60706 1549 aa41.04■■■■■ 4.16
COMMD7-202ENST00000446419 RB1CC1Q8TDY2 1594 aa39.7■■■■□ 3.95
COMMD7-202ENST00000446419 NACADO15069 1562 aa39.69■■■■□ 3.94
COMMD7-202ENST00000446419 ZCCHC6Q5VYS8 1495 aaKnown RBP39.65■■■■□ 3.94
COMMD7-202ENST00000446419 MYO15BQ96JP2 1530 aa39.53■■■■□ 3.92
COMMD7-202ENST00000446419 DCAF8L2P0C7V8 631 aa39.41■■■■□ 3.9
COMMD7-202ENST00000446419 DCAF1Q9Y4B6 1507 aa39.41■■■■□ 3.9
COMMD7-202ENST00000446419 UNC13AQ9UPW8 1703 aa38.76■■■■□ 3.79
COMMD7-202ENST00000446419 SCRIBQ14160 1630 aa38.49■■■■□ 3.75
COMMD7-202ENST00000446419 BICRAQ9NZM4 1560 aa38.39■■■■□ 3.74
COMMD7-202ENST00000446419 PABPN1Q86U42 306 aaKnown RBP eCLIP38.25■■■■□ 3.71
COMMD7-202ENST00000446419 SHROOM4Q9ULL8 1493 aa38.21■■■■□ 3.71
COMMD7-202ENST00000446419 EIF4G1Q04637 1599 aaKnown RBP37.41■■■■□ 3.58
COMMD7-202ENST00000446419 DNAJC5BQ9UF47 199 aa37.33■■■■□ 3.57
COMMD7-202ENST00000446419 CC2D2AQ9P2K1 1620 aa37.2■■■■□ 3.55
COMMD7-202ENST00000446419 CECR2Q9BXF3 1484 aa36.9■■■■□ 3.5
COMMD7-202ENST00000446419 BAZ1AQ9NRL2 1556 aaPredicted RBP36.88■■■■□ 3.49
COMMD7-202ENST00000446419 SMARCA4P51532 1647 aa36.87■■■■□ 3.49
COMMD7-202ENST00000446419 SMARCA2P51531 1590 aa36.64■■■■□ 3.46
COMMD7-202ENST00000446419 ATAD2BQ9ULI0 1458 aa36.57■■■■□ 3.45
COMMD7-202ENST00000446419 MROH2BQ7Z745 1585 aa36.57■■■■□ 3.44
COMMD7-202ENST00000446419 PEG3Q9GZU2 1588 aa36.54■■■■□ 3.44
COMMD7-202ENST00000446419 NCAPD3P42695 1498 aa36.54■■■■□ 3.44
COMMD7-202ENST00000446419 HMGXB3Q12766 1538 aa36.48■■■■□ 3.43
COMMD7-202ENST00000446419 BAZ1BQ9UIG0 1483 aaKnown RBP36.33■■■■□ 3.41
COMMD7-202ENST00000446419 WIZO95785 1651 aa36.2■■■■□ 3.39
COMMD7-202ENST00000446419 RSF1Q96T23 1441 aaPredicted RBP36.2■■■■□ 3.38
COMMD7-202ENST00000446419 TOP2AP11388 1531 aaKnown RBP35.91■■■■□ 3.34
COMMD7-202ENST00000446419 LAMC3Q9Y6N6 1575 aa35.63■■■■□ 3.29
COMMD7-202ENST00000446419 NESP48681 1621 aa35.53■■■■□ 3.28
COMMD7-202ENST00000446419 CADPSQ9ULU8 1353 aa35.46■■■■□ 3.27
COMMD7-202ENST00000446419 ERCC6Q03468 1493 aa35.44■■■■□ 3.26
COMMD7-202ENST00000446419 CCDC88BA6NC98 1476 aa35.37■■■■□ 3.25
COMMD7-202ENST00000446419 PDS5BQ9NTI5 1447 aa35.33■■■■□ 3.25
COMMD7-202ENST00000446419 CFTRP13569 1480 aa35.32■■■■□ 3.24
COMMD7-202ENST00000446419 SUPT5HO00267 1087 aaKnown RBP35.28■■■■□ 3.24
COMMD7-202ENST00000446419 KIF21AQ7Z4S6 1674 aa35.23■■■■□ 3.23
COMMD7-202ENST00000446419 PRDM2Q13029 1718 aa35.22■■■■□ 3.23
COMMD7-202ENST00000446419 THOC2Q8NI27 1593 aaKnown RBP35.11■■■■□ 3.21
COMMD7-202ENST00000446419 FANCD2Q9BXW9 1451 aa35.08■■■■□ 3.21
COMMD7-202ENST00000446419 CEP164Q9UPV0 1460 aa35.08■■■■□ 3.21
COMMD7-202ENST00000446419 CUX2O14529 1486 aa35.06■■■■□ 3.2
COMMD7-202ENST00000446419 MRC2Q9UBG0 1479 aa34.99■■■■□ 3.19
COMMD7-202ENST00000446419 WDR62O43379 1518 aa34.88■■■■□ 3.17
COMMD7-202ENST00000446419 URB2Q14146 1524 aaKnown RBP34.69■■■■□ 3.14
COMMD7-202ENST00000446419 ABCC8Q09428 1581 aa34.63■■■■□ 3.13
COMMD7-202ENST00000446419 DNMBPQ6XZF7 1577 aa34.58■■■■□ 3.13
COMMD7-202ENST00000446419 TOPBP1Q92547 1522 aa34.55■■■■□ 3.12
COMMD7-202ENST00000446419 CUX1P39880 1505 aa34.33■■■■□ 3.09
COMMD7-202ENST00000446419 IFT140Q96RY7 1462 aa34.32■■■■□ 3.08
COMMD7-202ENST00000446419 POLA1P09884 1462 aaPredicted RBP34.25■■■■□ 3.07
COMMD7-202ENST00000446419 FGD5Q6ZNL6 1462 aa34.19■■■■□ 3.06
COMMD7-202ENST00000446419 WRNQ14191 1432 aaPredicted RBP eCLIP34.17■■■■□ 3.06
COMMD7-202ENST00000446419 TARBP1Q13395 1621 aaKnown RBP34.17■■■■□ 3.06
COMMD7-202ENST00000446419 BIVM-ERCC5R4GMW8 1640 aa34.16■■■■□ 3.06
COMMD7-202ENST00000446419 TOP2BQ02880 1626 aa34.13■■■■□ 3.05
COMMD7-202ENST00000446419 SYNJ1O43426 1573 aa34.08■■■■□ 3.05
COMMD7-202ENST00000446419 SOGA1O94964 1423 aa34.07■■■■□ 3.04
COMMD7-202ENST00000446419 WDR97A6NE52 1622 aa34.06■■■■□ 3.04
COMMD7-202ENST00000446419 EIF4G3O43432 1585 aaKnown RBP34.05■■■■□ 3.04
COMMD7-202ENST00000446419 ZNF608Q9ULD9 1512 aaPredicted RBP34.05■■■■□ 3.04
COMMD7-202ENST00000446419 RAD54L2Q9Y4B4 1467 aa34.02■■■■□ 3.04
COMMD7-202ENST00000446419 ABCA10Q8WWZ4 1543 aa33.9■■■■□ 3.02
COMMD7-202ENST00000446419 AQRO60306 1485 aaKnown RBP eCLIP33.85■■■■□ 3.019e-11■■■■■ 29.6
COMMD7-202ENST00000446419 DNAJC5Q9H3Z4 198 aa33.8■■■■□ 3
COMMD7-202ENST00000446419 TDRD9Q8NDG6 1382 aaKnown RBP33.8■■■■□ 3
COMMD7-202ENST00000446419 ABCA5Q8WWZ7 1642 aa33.79■■■■□ 3
COMMD7-202ENST00000446419 PBRM1Q86U86 1689 aa33.73■■■□□ 2.99
COMMD7-202ENST00000446419 GRIN2BQ13224 1484 aa33.73■■■□□ 2.99
COMMD7-202ENST00000446419 GAPVD1Q14C86 1478 aa33.73■■■□□ 2.99
COMMD7-202ENST00000446419 MAGI1Q96QZ7 1491 aaPredicted RBP33.66■■■□□ 2.98
COMMD7-202ENST00000446419 SNAPC4Q5SXM2 1469 aa33.64■■■□□ 2.98
COMMD7-202ENST00000446419 CHD1O14646 1710 aa33.58■■■□□ 2.97
COMMD7-202ENST00000446419 ERICH3Q5RHP9 1530 aa33.54■■■□□ 2.96
COMMD7-202ENST00000446419 SYNJ2O15056 1496 aa33.5■■■□□ 2.95
COMMD7-202ENST00000446419 OSCARQ8IYS5 282 aa33.49■■■□□ 2.95
COMMD7-202ENST00000446419 KIF27Q86VH2 1401 aa33.47■■■□□ 2.95
COMMD7-202ENST00000446419 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
COMMD7-202ENST00000446419 TRIM41Q8WV44 630 aa33.39■■■□□ 2.94
COMMD7-202ENST00000446419 FBLN2P98095 1184 aa33.38■■■□□ 2.93
COMMD7-202ENST00000446419 FHAD1B1AJZ9 1412 aa33.36■■■□□ 2.93
COMMD7-202ENST00000446419 CHMP7Q8WUX9 453 aaPredicted RBP33.36■■■□□ 2.93
COMMD7-202ENST00000446419 CUL7Q14999 1698 aa33.32■■■□□ 2.92
COMMD7-202ENST00000446419 GRIN2AQ12879 1464 aa33.29■■■□□ 2.92
COMMD7-202ENST00000446419 CLASP1Q7Z460 1538 aa33.21■■■□□ 2.91
COMMD7-202ENST00000446419 IGF1RP08069 1367 aa33.2■■■□□ 2.91
COMMD7-202ENST00000446419 NUP160Q12769 1436 aa33.13■■■□□ 2.89
COMMD7-202ENST00000446419 CEP170Q5SW79 1584 aa33.11■■■□□ 2.89
COMMD7-202ENST00000446419 RUSC2Q8N2Y8 1516 aa33.06■■■□□ 2.88
COMMD7-202ENST00000446419 CARMIL1Q5VZK9 1371 aa33.05■■■□□ 2.88
COMMD7-202ENST00000446419 ARHGEF11O15085 1522 aa33.03■■■□□ 2.88
COMMD7-202ENST00000446419 CHIC1Q5VXU3 224 aa33.02■■■□□ 2.88
COMMD7-202ENST00000446419 RIMBP3CA6NJZ7 1639 aa33.02■■■□□ 2.88
COMMD7-202ENST00000446419 RIMBP3BA6NNM3 1639 aa33.02■■■□□ 2.88
COMMD7-202ENST00000446419 RIMBP3Q9UFD9 1639 aa33.02■■■□□ 2.88
COMMD7-202ENST00000446419 EEA1Q15075 1411 aa32.99■■■□□ 2.87
COMMD7-202ENST00000446419 RAPGEF2Q9Y4G8 1499 aa32.93■■■□□ 2.86
COMMD7-202ENST00000446419 SHROOM2Q13796 1616 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms