RNA–Protein interactions for RNA: ENST00000366690.4

RAB4A-201, Transcript of RAB4A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB4A, Length 2,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-201ENST00000366690 NISCHQ9Y2I1 1504 aa37.79■■■■□ 3.64
RAB4A-201ENST00000366690 SHROOM4Q9ULL8 1493 aa33■■■□□ 2.87
RAB4A-201ENST00000366690 SUPT5HO00267 1087 aaKnown RBP32.39■■■□□ 2.78
RAB4A-201ENST00000366690 DCAF8L2P0C7V8 631 aa32.06■■■□□ 2.72
RAB4A-201ENST00000366690 ZCCHC6Q5VYS8 1495 aaKnown RBP31.94■■■□□ 2.7
RAB4A-201ENST00000366690 CCDC180Q9P1Z9 1646 aa31.8■■■□□ 2.68
RAB4A-201ENST00000366690 CHIC1Q5VXU3 224 aa31.25■■■□□ 2.59
RAB4A-201ENST00000366690 MYO15BQ96JP2 1530 aa31.25■■■□□ 2.59
RAB4A-201ENST00000366690 DCAF1Q9Y4B6 1507 aa30.68■■■□□ 2.5
RAB4A-201ENST00000366690 PCGF6Q9BYE7 350 aa30.67■■■□□ 2.5
RAB4A-201ENST00000366690 LOC105371045A0A1W2PR82 267 aa30.61■■■□□ 2.49
RAB4A-201ENST00000366690 HRCP23327 699 aa30.48■■■□□ 2.47
RAB4A-201ENST00000366690 SCRIBQ14160 1630 aa30.35■■■□□ 2.45
RAB4A-201ENST00000366690 PPARGC1BQ86YN6 1023 aaKnown RBP30.23■■■□□ 2.43
RAB4A-201ENST00000366690 ABCC9O60706 1549 aa30.17■■■□□ 2.42
RAB4A-201ENST00000366690 RSF1Q96T23 1441 aaPredicted RBP30.08■■■□□ 2.41
RAB4A-201ENST00000366690 EHMT2Q96KQ7 1210 aa30.06■■■□□ 2.4
RAB4A-201ENST00000366690 FAM9AQ8IZU1 332 aaPredicted RBP30.04■■■□□ 2.4
RAB4A-201ENST00000366690 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
RAB4A-201ENST00000366690 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.37
RAB4A-201ENST00000366690 TRIM26Q12899 539 aaPredicted RBP29.73■■■□□ 2.35
RAB4A-201ENST00000366690 CECR2Q9BXF3 1484 aa29.73■■■□□ 2.35
RAB4A-201ENST00000366690 MROH2BQ7Z745 1585 aa29.56■■■□□ 2.32
RAB4A-201ENST00000366690 NACADO15069 1562 aa29.47■■■□□ 2.31
RAB4A-201ENST00000366690 WIZO95785 1651 aa29.44■■■□□ 2.3
RAB4A-201ENST00000366690 TTBK1Q5TCY1 1321 aaPredicted RBP29.07■■■□□ 2.24
RAB4A-201ENST00000366690 BAZ1AQ9NRL2 1556 aaPredicted RBP29.02■■■□□ 2.24
RAB4A-201ENST00000366690 ABCC8Q09428 1581 aa28.95■■■□□ 2.23
RAB4A-201ENST00000366690 ZEB1P37275 1124 aaPredicted RBP28.95■■■□□ 2.22
RAB4A-201ENST00000366690 PABPN1Q86U42 306 aaKnown RBP eCLIP28.89■■■□□ 2.22
RAB4A-201ENST00000366690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.86■■■□□ 2.21
RAB4A-201ENST00000366690 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.21
RAB4A-201ENST00000366690 EIF4G1Q04637 1599 aaKnown RBP28.82■■■□□ 2.2
RAB4A-201ENST00000366690 SMARCA4P51532 1647 aa28.77■■■□□ 2.2
RAB4A-201ENST00000366690 TOP2AP11388 1531 aaKnown RBP28.75■■■□□ 2.19
RAB4A-201ENST00000366690 UNC13AQ9UPW8 1703 aa28.73■■■□□ 2.19
RAB4A-201ENST00000366690 SOGA1O94964 1423 aa28.69■■■□□ 2.18
RAB4A-201ENST00000366690 SMARCA2P51531 1590 aa28.68■■■□□ 2.18
RAB4A-201ENST00000366690 CCER1Q8TC90 406 aaPredicted RBP28.68■■■□□ 2.18
RAB4A-201ENST00000366690 UBTFP17480 764 aaKnown RBP28.59■■■□□ 2.17
RAB4A-201ENST00000366690 RUSC2Q8N2Y8 1516 aa28.59■■■□□ 2.17
RAB4A-201ENST00000366690 CEP162Q5TB80 1403 aa28.53■■■□□ 2.16
RAB4A-201ENST00000366690 CSRNP3Q8WYN3 585 aa28.46■■■□□ 2.15
RAB4A-201ENST00000366690 RANGAP1P46060 587 aaPredicted RBP28.37■■■□□ 2.13
RAB4A-201ENST00000366690 BICRAQ9NZM4 1560 aa28.34■■■□□ 2.13
RAB4A-201ENST00000366690 SCAF1Q9H7N4 1312 aaKnown RBP28.32■■■□□ 2.12
RAB4A-201ENST00000366690 TNIKQ9UKE5 1360 aa28.31■■■□□ 2.12
RAB4A-201ENST00000366690 WRNQ14191 1432 aaPredicted RBP eCLIP28.27■■■□□ 2.12
RAB4A-201ENST00000366690 GOLGA3Q08378 1498 aa28.16■■■□□ 2.1
RAB4A-201ENST00000366690 SYNJ1O43426 1573 aa28.14■■■□□ 2.1
RAB4A-201ENST00000366690 HNRNPUL2Q1KMD3 747 aaKnown RBP28.14■■■□□ 2.1
RAB4A-201ENST00000366690 EEA1Q15075 1411 aa28.13■■■□□ 2.09
RAB4A-201ENST00000366690 DIEXFQ68CQ4 756 aaKnown RBP28.11■■■□□ 2.09
RAB4A-201ENST00000366690 ATAD2BQ9ULI0 1458 aa28.04■■■□□ 2.08
RAB4A-201ENST00000366690 BAZ1BQ9UIG0 1483 aaKnown RBP28.04■■■□□ 2.08
RAB4A-201ENST00000366690 NEUROD1Q13562 356 aa27.99■■■□□ 2.07
RAB4A-201ENST00000366690 PEG3Q9GZU2 1588 aa27.97■■■□□ 2.07
RAB4A-201ENST00000366690 CLIP1P30622 1438 aa27.96■■■□□ 2.07
RAB4A-201ENST00000366690 CEP164Q9UPV0 1460 aa27.95■■■□□ 2.06
RAB4A-201ENST00000366690 RAPGEF2Q9Y4G8 1499 aa27.93■■■□□ 2.06
RAB4A-201ENST00000366690 ACIN1Q9UKV3 1341 aaKnown RBP27.87■■■□□ 2.05
RAB4A-201ENST00000366690 APLP2Q06481 763 aa27.87■■■□□ 2.05
RAB4A-201ENST00000366690 KIF21BO75037 1637 aa27.81■■■□□ 2.04
RAB4A-201ENST00000366690 YTHDC1Q96MU7 727 aaKnown RBP27.78■■■□□ 2.04
RAB4A-201ENST00000366690 ZNF316A6NFI3 1004 aaPredicted RBP27.76■■■□□ 2.03
RAB4A-201ENST00000366690 VPS8Q8N3P4 1428 aa27.75■■■□□ 2.03
RAB4A-201ENST00000366690 GTF3C3Q9Y5Q9 886 aa27.72■■■□□ 2.03
RAB4A-201ENST00000366690 CENPBP07199 599 aaPredicted RBP27.65■■■□□ 2.02
RAB4A-201ENST00000366690 TOP2BQ02880 1626 aa27.62■■■□□ 2.01
RAB4A-201ENST00000366690 KANK4Q5T7N3 995 aaPredicted RBP27.56■■■□□ 2
RAB4A-201ENST00000366690 MIER1Q8N108 512 aa27.56■■■□□ 2
RAB4A-201ENST00000366690 ITGAEP38570 1179 aa27.47■■□□□ 1.99
RAB4A-201ENST00000366690 CUX1P39880 1505 aa27.46■■□□□ 1.99
RAB4A-201ENST00000366690 ARAP1Q96P48 1450 aa27.44■■□□□ 1.98
RAB4A-201ENST00000366690 BIVM-ERCC5R4GMW8 1640 aa27.44■■□□□ 1.98
RAB4A-201ENST00000366690 PRXQ9BXM0 1461 aa27.42■■□□□ 1.98
RAB4A-201ENST00000366690 PELP1Q8IZL8 1130 aaKnown RBP27.38■■□□□ 1.97
RAB4A-201ENST00000366690 NCAPD3P42695 1498 aa27.34■■□□□ 1.97
RAB4A-201ENST00000366690 KIF27Q86VH2 1401 aa27.34■■□□□ 1.97
RAB4A-201ENST00000366690 ERICH3Q5RHP9 1530 aa27.31■■□□□ 1.96
RAB4A-201ENST00000366690 HMGXB3Q12766 1538 aa27.27■■□□□ 1.96
RAB4A-201ENST00000366690 DHX57Q6P158 1386 aaKnown RBP27.27■■□□□ 1.96
RAB4A-201ENST00000366690 CFTRP13569 1480 aa27.23■■□□□ 1.95
RAB4A-201ENST00000366690 ARHGAP35Q9NRY4 1499 aa27.19■■□□□ 1.94
RAB4A-201ENST00000366690 CUX2O14529 1486 aa27.18■■□□□ 1.94
RAB4A-201ENST00000366690 P3H3Q8IVL6 736 aa27.18■■□□□ 1.94
RAB4A-201ENST00000366690 ATP1B4Q9UN42 357 aaPredicted RBP27.17■■□□□ 1.94
RAB4A-201ENST00000366690 CCNB3Q8WWL7 1395 aa27.09■■□□□ 1.93
RAB4A-201ENST00000366690 IGF1RP08069 1367 aa27.08■■□□□ 1.93
RAB4A-201ENST00000366690 RRBP1Q9P2E9 1410 aaKnown RBP27.05■■□□□ 1.92
RAB4A-201ENST00000366690 CARMIL1Q5VZK9 1371 aa27■■□□□ 1.91
RAB4A-201ENST00000366690 FAM50AQ14320 339 aaKnown RBP27■■□□□ 1.91
RAB4A-201ENST00000366690 FGD5Q6ZNL6 1462 aa27■■□□□ 1.91
RAB4A-201ENST00000366690 CADPSQ9ULU8 1353 aa26.98■■□□□ 1.91
RAB4A-201ENST00000366690 CLSPNQ9HAW4 1339 aa26.96■■□□□ 1.91
RAB4A-201ENST00000366690 RAB3GAP2Q9H2M9 1393 aa26.94■■□□□ 1.9
RAB4A-201ENST00000366690 PHLDB1Q86UU1 1377 aa26.87■■□□□ 1.89
RAB4A-201ENST00000366690 SIN3AQ96ST3 1273 aa26.86■■□□□ 1.89
RAB4A-201ENST00000366690 RAD54L2Q9Y4B4 1467 aa26.85■■□□□ 1.89
RAB4A-201ENST00000366690 TIAM1Q13009 1591 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms