Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AC239809.2-201ENST00000415381 517 ntBASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AL031598.1-201ENST00000561511 1773 ntBASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KRT16P5-201ENST00000455284 522 ntBASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AL023875.1-201ENST00000640777 796 ntBASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-8A0A0A6YYG3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KRASP1-201ENST00000407852 552 ntBASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KRT18P6-201ENST00000555540 1265 ntBASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms