RNA–Protein interactions for RNA: ENST00000294600.6

CCDC27-201, Transcript of coiled-coil domain containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC27, Length 2,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27-201ENST00000294600 NISCHQ9Y2I1 1504 aa40.72■■■■■ 4.11
CCDC27-201ENST00000294600 CCDC180Q9P1Z9 1646 aa35.01■■■■□ 3.19
CCDC27-201ENST00000294600 ZCCHC6Q5VYS8 1495 aaKnown RBP34.33■■■■□ 3.09
CCDC27-201ENST00000294600 SHROOM4Q9ULL8 1493 aa34■■■■□ 3.03
CCDC27-201ENST00000294600 DCAF8L2P0C7V8 631 aa33.7■■■□□ 2.99
CCDC27-201ENST00000294600 DCAF1Q9Y4B6 1507 aa33.54■■■□□ 2.96
CCDC27-201ENST00000294600 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.89
CCDC27-201ENST00000294600 MYO15BQ96JP2 1530 aa32.84■■■□□ 2.85
CCDC27-201ENST00000294600 ABCC9O60706 1549 aa32.75■■■□□ 2.83
CCDC27-201ENST00000294600 SCRIBQ14160 1630 aa32.52■■■□□ 2.8
CCDC27-201ENST00000294600 NACADO15069 1562 aa32.5■■■□□ 2.79
CCDC27-201ENST00000294600 RB1CC1Q8TDY2 1594 aa32.08■■■□□ 2.73
CCDC27-201ENST00000294600 CHIC1Q5VXU3 224 aa31.95■■■□□ 2.71
CCDC27-201ENST00000294600 RSF1Q96T23 1441 aaPredicted RBP31.93■■■□□ 2.7
CCDC27-201ENST00000294600 CECR2Q9BXF3 1484 aa31.69■■■□□ 2.66
CCDC27-201ENST00000294600 MROH2BQ7Z745 1585 aa31.55■■■□□ 2.64
CCDC27-201ENST00000294600 UNC13AQ9UPW8 1703 aa31.47■■■□□ 2.63
CCDC27-201ENST00000294600 BAZ1AQ9NRL2 1556 aaPredicted RBP31.34■■■□□ 2.61
CCDC27-201ENST00000294600 WIZO95785 1651 aa31.33■■■□□ 2.61
CCDC27-201ENST00000294600 BICRAQ9NZM4 1560 aa31.15■■■□□ 2.58
CCDC27-201ENST00000294600 PABPN1Q86U42 306 aaKnown RBP eCLIP31.13■■■□□ 2.57
CCDC27-201ENST00000294600 SMARCA4P51532 1647 aa31.13■■■□□ 2.57
CCDC27-201ENST00000294600 TRIM41Q8WV44 630 aa30.96■■■□□ 2.55
CCDC27-201ENST00000294600 TOP2AP11388 1531 aaKnown RBP30.94■■■□□ 2.54
CCDC27-201ENST00000294600 LOC105371045A0A1W2PR82 267 aa30.88■■■□□ 2.53
CCDC27-201ENST00000294600 CCDC88BA6NC98 1476 aa30.73■■■□□ 2.51
CCDC27-201ENST00000294600 SMARCA2P51531 1590 aa30.7■■■□□ 2.5
CCDC27-201ENST00000294600 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
CCDC27-201ENST00000294600 PEG3Q9GZU2 1588 aa30.64■■■□□ 2.5
CCDC27-201ENST00000294600 FAM9AQ8IZU1 332 aaPredicted RBP30.54■■■□□ 2.48
CCDC27-201ENST00000294600 ATAD2BQ9ULI0 1458 aa30.48■■■□□ 2.47
CCDC27-201ENST00000294600 BAZ1BQ9UIG0 1483 aaKnown RBP30.36■■■□□ 2.45
CCDC27-201ENST00000294600 ABCC8Q09428 1581 aa30.36■■■□□ 2.45
CCDC27-201ENST00000294600 PCGF6Q9BYE7 350 aa30.22■■■□□ 2.43
CCDC27-201ENST00000294600 EHMT2Q96KQ7 1210 aa30.19■■■□□ 2.42
CCDC27-201ENST00000294600 NCAPD3P42695 1498 aa30.05■■■□□ 2.4
CCDC27-201ENST00000294600 WRNQ14191 1432 aaPredicted RBP eCLIP30.02■■■□□ 2.4
CCDC27-201ENST00000294600 HMGXB3Q12766 1538 aa30.01■■■□□ 2.4
CCDC27-201ENST00000294600 SOGA1O94964 1423 aa29.97■■■□□ 2.39
CCDC27-201ENST00000294600 TRIM26Q12899 539 aaPredicted RBP29.92■■■□□ 2.38
CCDC27-201ENST00000294600 EEA1Q15075 1411 aa29.89■■■□□ 2.37
CCDC27-201ENST00000294600 SYNJ1O43426 1573 aa29.86■■■□□ 2.37
CCDC27-201ENST00000294600 HRCP23327 699 aa29.86■■■□□ 2.37
CCDC27-201ENST00000294600 RUSC2Q8N2Y8 1516 aa29.82■■■□□ 2.36
CCDC27-201ENST00000294600 CSRNP3Q8WYN3 585 aa29.8■■■□□ 2.36
CCDC27-201ENST00000294600 TNIKQ9UKE5 1360 aa29.64■■■□□ 2.33
CCDC27-201ENST00000294600 TOP2BQ02880 1626 aa29.62■■■□□ 2.33
CCDC27-201ENST00000294600 CFTRP13569 1480 aa29.61■■■□□ 2.33
CCDC27-201ENST00000294600 GOLGA3Q08378 1498 aa29.57■■■□□ 2.32
CCDC27-201ENST00000294600 CEP162Q5TB80 1403 aa29.57■■■□□ 2.32
CCDC27-201ENST00000294600 UBTFP17480 764 aaKnown RBP29.56■■■□□ 2.32
CCDC27-201ENST00000294600 CC2D2AQ9P2K1 1620 aa29.56■■■□□ 2.32
CCDC27-201ENST00000294600 BIVM-ERCC5R4GMW8 1640 aa29.54■■■□□ 2.32
CCDC27-201ENST00000294600 CEP164Q9UPV0 1460 aa29.49■■■□□ 2.31
CCDC27-201ENST00000294600 KIF21BO75037 1637 aa29.46■■■□□ 2.31
CCDC27-201ENST00000294600 PPARGC1BQ86YN6 1023 aaKnown RBP29.44■■■□□ 2.3
CCDC27-201ENST00000294600 CUX1P39880 1505 aa29.44■■■□□ 2.3
CCDC27-201ENST00000294600 CADPSQ9ULU8 1353 aa29.4■■■□□ 2.3
CCDC27-201ENST00000294600 PRDM2Q13029 1718 aa29.35■■■□□ 2.29
CCDC27-201ENST00000294600 RAPGEF2Q9Y4G8 1499 aa29.29■■■□□ 2.28
CCDC27-201ENST00000294600 KIF27Q86VH2 1401 aa29.18■■■□□ 2.26
CCDC27-201ENST00000294600 CLIP1P30622 1438 aa29.18■■■□□ 2.26
CCDC27-201ENST00000294600 PRXQ9BXM0 1461 aa29.16■■■□□ 2.26
CCDC27-201ENST00000294600 ERICH3Q5RHP9 1530 aa29.12■■■□□ 2.25
CCDC27-201ENST00000294600 FANCD2Q9BXW9 1451 aa29.08■■■□□ 2.25
CCDC27-201ENST00000294600 TTBK1Q5TCY1 1321 aaPredicted RBP29.07■■■□□ 2.24
CCDC27-201ENST00000294600 ZEB1P37275 1124 aaPredicted RBP29.04■■■□□ 2.24
CCDC27-201ENST00000294600 FGD5Q6ZNL6 1462 aa29.01■■■□□ 2.23
CCDC27-201ENST00000294600 RANGAP1P46060 587 aaPredicted RBP29■■■□□ 2.23
CCDC27-201ENST00000294600 CUX2O14529 1486 aa28.99■■■□□ 2.23
CCDC27-201ENST00000294600 VPS8Q8N3P4 1428 aa28.99■■■□□ 2.23
CCDC27-201ENST00000294600 NESP48681 1621 aa28.98■■■□□ 2.23
CCDC27-201ENST00000294600 IGF1RP08069 1367 aa28.9■■■□□ 2.22
CCDC27-201ENST00000294600 DNMBPQ6XZF7 1577 aa28.88■■■□□ 2.21
CCDC27-201ENST00000294600 LAMC3Q9Y6N6 1575 aa28.87■■■□□ 2.21
CCDC27-201ENST00000294600 TOPBP1Q92547 1522 aa28.83■■■□□ 2.21
CCDC27-201ENST00000294600 DNAJC5BQ9UF47 199 aa28.82■■■□□ 2.2
CCDC27-201ENST00000294600 APLP2Q06481 763 aa28.81■■■□□ 2.2
CCDC27-201ENST00000294600 ARAP1Q96P48 1450 aa28.78■■■□□ 2.2
CCDC27-201ENST00000294600 CARMIL1Q5VZK9 1371 aa28.77■■■□□ 2.2
CCDC27-201ENST00000294600 POLA1P09884 1462 aaPredicted RBP28.76■■■□□ 2.19
CCDC27-201ENST00000294600 RAD54L2Q9Y4B4 1467 aa28.75■■■□□ 2.19
CCDC27-201ENST00000294600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.74■■■□□ 2.19
CCDC27-201ENST00000294600 ABCA10Q8WWZ4 1543 aa28.72■■■□□ 2.19
CCDC27-201ENST00000294600 PDS5BQ9NTI5 1447 aa28.7■■■□□ 2.18
CCDC27-201ENST00000294600 CCER1Q8TC90 406 aaPredicted RBP28.68■■■□□ 2.18
CCDC27-201ENST00000294600 URB2Q14146 1524 aaKnown RBP28.68■■■□□ 2.18
CCDC27-201ENST00000294600 ARHGAP35Q9NRY4 1499 aa28.65■■■□□ 2.18
CCDC27-201ENST00000294600 KIF21AQ7Z4S6 1674 aa28.52■■■□□ 2.16
CCDC27-201ENST00000294600 WDR97A6NE52 1622 aa28.48■■■□□ 2.15
CCDC27-201ENST00000294600 KANK4Q5T7N3 995 aaPredicted RBP28.47■■■□□ 2.15
CCDC27-201ENST00000294600 HNRNPUL2Q1KMD3 747 aaKnown RBP28.47■■■□□ 2.15
CCDC27-201ENST00000294600 CUL7Q14999 1698 aa28.46■■■□□ 2.15
CCDC27-201ENST00000294600 TDRD9Q8NDG6 1382 aaKnown RBP28.43■■■□□ 2.14
CCDC27-201ENST00000294600 ABCA5Q8WWZ7 1642 aa28.39■■■□□ 2.14
CCDC27-201ENST00000294600 GAPVD1Q14C86 1478 aa28.37■■■□□ 2.13
CCDC27-201ENST00000294600 TARBP1Q13395 1621 aaKnown RBP28.3■■■□□ 2.12
CCDC27-201ENST00000294600 P3H3Q8IVL6 736 aa28.29■■■□□ 2.12
CCDC27-201ENST00000294600 FHAD1B1AJZ9 1412 aa28.28■■■□□ 2.12
CCDC27-201ENST00000294600 MRC2Q9UBG0 1479 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms