RNA–Protein interactions for RNA: ENST00000378680.6

DMD-208, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 1,858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-208ENST00000378680 NISCHQ9Y2I1 1504 aa42.79■■■■■ 4.44
DMD-208ENST00000378680 CCDC180Q9P1Z9 1646 aa37.36■■■■□ 3.57
DMD-208ENST00000378680 ZCCHC6Q5VYS8 1495 aaKnown RBP35.93■■■■□ 3.34
DMD-208ENST00000378680 DCAF8L2P0C7V8 631 aa35.39■■■■□ 3.26
DMD-208ENST00000378680 DCAF1Q9Y4B6 1507 aa35.39■■■■□ 3.26
DMD-208ENST00000378680 ABCC9O60706 1549 aa35.32■■■■□ 3.24
DMD-208ENST00000378680 MYO15BQ96JP2 1530 aa34.99■■■■□ 3.19
DMD-208ENST00000378680 SHROOM4Q9ULL8 1493 aa34.88■■■■□ 3.17
DMD-208ENST00000378680 NACADO15069 1562 aa34.8■■■■□ 3.16
DMD-208ENST00000378680 RB1CC1Q8TDY2 1594 aa34.51■■■■□ 3.12
DMD-208ENST00000378680 SCRIBQ14160 1630 aa34.32■■■■□ 3.09
DMD-208ENST00000378680 UNC13AQ9UPW8 1703 aa33.79■■■■□ 3
DMD-208ENST00000378680 SUPT5HO00267 1087 aaKnown RBP33.58■■■□□ 2.97
DMD-208ENST00000378680 BICRAQ9NZM4 1560 aa33.41■■■□□ 2.94
DMD-208ENST00000378680 PABPN1Q86U42 306 aaKnown RBP eCLIP33.3■■■□□ 2.92
DMD-208ENST00000378680 CECR2Q9BXF3 1484 aa33.22■■■□□ 2.91
DMD-208ENST00000378680 RSF1Q96T23 1441 aaPredicted RBP33.17■■■□□ 2.9
DMD-208ENST00000378680 BAZ1AQ9NRL2 1556 aaPredicted RBP33.07■■■□□ 2.88
DMD-208ENST00000378680 MROH2BQ7Z745 1585 aa33.04■■■□□ 2.88
DMD-208ENST00000378680 SMARCA4P51532 1647 aa32.91■■■□□ 2.86
DMD-208ENST00000378680 WIZO95785 1651 aa32.79■■■□□ 2.84
DMD-208ENST00000378680 PEG3Q9GZU2 1588 aa32.49■■■□□ 2.79
DMD-208ENST00000378680 TOP2AP11388 1531 aaKnown RBP32.46■■■□□ 2.79
DMD-208ENST00000378680 EIF4G1Q04637 1599 aaKnown RBP32.43■■■□□ 2.78
DMD-208ENST00000378680 SMARCA2P51531 1590 aa32.38■■■□□ 2.77
DMD-208ENST00000378680 ATAD2BQ9ULI0 1458 aa32.36■■■□□ 2.77
DMD-208ENST00000378680 BAZ1BQ9UIG0 1483 aaKnown RBP32.21■■■□□ 2.75
DMD-208ENST00000378680 CCDC88BA6NC98 1476 aa32.11■■■□□ 2.73
DMD-208ENST00000378680 CHIC1Q5VXU3 224 aa32.11■■■□□ 2.73
DMD-208ENST00000378680 NCAPD3P42695 1498 aa32.09■■■□□ 2.73
DMD-208ENST00000378680 HMGXB3Q12766 1538 aa32.06■■■□□ 2.72
DMD-208ENST00000378680 CC2D2AQ9P2K1 1620 aa31.97■■■□□ 2.71
DMD-208ENST00000378680 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
DMD-208ENST00000378680 ABCC8Q09428 1581 aa31.42■■■□□ 2.62
DMD-208ENST00000378680 CFTRP13569 1480 aa31.37■■■□□ 2.61
DMD-208ENST00000378680 CADPSQ9ULU8 1353 aa31.28■■■□□ 2.6
DMD-208ENST00000378680 PRDM2Q13029 1718 aa31.26■■■□□ 2.59
DMD-208ENST00000378680 WRNQ14191 1432 aaPredicted RBP eCLIP31.25■■■□□ 2.59
DMD-208ENST00000378680 DNAJC5BQ9UF47 199 aa31.11■■■□□ 2.57
DMD-208ENST00000378680 SYNJ1O43426 1573 aa31.09■■■□□ 2.57
DMD-208ENST00000378680 LAMC3Q9Y6N6 1575 aa31.04■■■□□ 2.56
DMD-208ENST00000378680 TOP2BQ02880 1626 aa31■■■□□ 2.55
DMD-208ENST00000378680 FAM9AQ8IZU1 332 aaPredicted RBP30.99■■■□□ 2.55
DMD-208ENST00000378680 NESP48681 1621 aa30.98■■■□□ 2.55
DMD-208ENST00000378680 BIVM-ERCC5R4GMW8 1640 aa30.97■■■□□ 2.55
DMD-208ENST00000378680 FANCD2Q9BXW9 1451 aa30.94■■■□□ 2.54
DMD-208ENST00000378680 CUX1P39880 1505 aa30.9■■■□□ 2.54
DMD-208ENST00000378680 LOC105371045A0A1W2PR82 267 aa30.87■■■□□ 2.53
DMD-208ENST00000378680 EEA1Q15075 1411 aa30.83■■■□□ 2.53
DMD-208ENST00000378680 SOGA1O94964 1423 aa30.82■■■□□ 2.52
DMD-208ENST00000378680 PDS5BQ9NTI5 1447 aa30.81■■■□□ 2.52
DMD-208ENST00000378680 CEP164Q9UPV0 1460 aa30.76■■■□□ 2.51
DMD-208ENST00000378680 RUSC2Q8N2Y8 1516 aa30.69■■■□□ 2.5
DMD-208ENST00000378680 DNMBPQ6XZF7 1577 aa30.66■■■□□ 2.5
DMD-208ENST00000378680 CSRNP3Q8WYN3 585 aa30.64■■■□□ 2.5
DMD-208ENST00000378680 KIF21AQ7Z4S6 1674 aa30.64■■■□□ 2.5
DMD-208ENST00000378680 TOPBP1Q92547 1522 aa30.59■■■□□ 2.49
DMD-208ENST00000378680 FGD5Q6ZNL6 1462 aa30.58■■■□□ 2.49
DMD-208ENST00000378680 EHMT2Q96KQ7 1210 aa30.55■■■□□ 2.48
DMD-208ENST00000378680 URB2Q14146 1524 aaKnown RBP30.52■■■□□ 2.48
DMD-208ENST00000378680 KIF27Q86VH2 1401 aa30.48■■■□□ 2.47
DMD-208ENST00000378680 POLA1P09884 1462 aaPredicted RBP30.43■■■□□ 2.46
DMD-208ENST00000378680 KIF21BO75037 1637 aa30.4■■■□□ 2.46
DMD-208ENST00000378680 CUX2O14529 1486 aa30.4■■■□□ 2.46
DMD-208ENST00000378680 MRC2Q9UBG0 1479 aa30.4■■■□□ 2.46
DMD-208ENST00000378680 GOLGA3Q08378 1498 aa30.38■■■□□ 2.45
DMD-208ENST00000378680 ERCC6Q03468 1493 aa30.33■■■□□ 2.45
DMD-208ENST00000378680 RAD54L2Q9Y4B4 1467 aa30.32■■■□□ 2.44
DMD-208ENST00000378680 ABCA10Q8WWZ4 1543 aa30.32■■■□□ 2.44
DMD-208ENST00000378680 UBTFP17480 764 aaKnown RBP30.27■■■□□ 2.44
DMD-208ENST00000378680 TNIKQ9UKE5 1360 aa30.27■■■□□ 2.44
DMD-208ENST00000378680 PRXQ9BXM0 1461 aa30.23■■■□□ 2.43
DMD-208ENST00000378680 WDR62O43379 1518 aa30.22■■■□□ 2.43
DMD-208ENST00000378680 WDR97A6NE52 1622 aa30.21■■■□□ 2.43
DMD-208ENST00000378680 ERICH3Q5RHP9 1530 aa30.21■■■□□ 2.43
DMD-208ENST00000378680 RAPGEF2Q9Y4G8 1499 aa30.2■■■□□ 2.43
DMD-208ENST00000378680 IGF1RP08069 1367 aa30.18■■■□□ 2.42
DMD-208ENST00000378680 TARBP1Q13395 1621 aaKnown RBP30.12■■■□□ 2.41
DMD-208ENST00000378680 THOC2Q8NI27 1593 aaKnown RBP30.12■■■□□ 2.41
DMD-208ENST00000378680 CEP162Q5TB80 1403 aa30.09■■■□□ 2.41
DMD-208ENST00000378680 ABCA5Q8WWZ7 1642 aa30.06■■■□□ 2.4
DMD-208ENST00000378680 CARMIL1Q5VZK9 1371 aa30.06■■■□□ 2.4
DMD-208ENST00000378680 TDRD9Q8NDG6 1382 aaKnown RBP30.05■■■□□ 2.4
DMD-208ENST00000378680 GAPVD1Q14C86 1478 aa30.02■■■□□ 2.4
DMD-208ENST00000378680 IFT140Q96RY7 1462 aa30.02■■■□□ 2.4
DMD-208ENST00000378680 CUL7Q14999 1698 aa30■■■□□ 2.39
DMD-208ENST00000378680 CLIP1P30622 1438 aa29.89■■■□□ 2.37
DMD-208ENST00000378680 PBRM1Q86U86 1689 aa29.87■■■□□ 2.37
DMD-208ENST00000378680 AQRO60306 1485 aaKnown RBP eCLIP29.85■■■□□ 2.37
DMD-208ENST00000378680 ZNF608Q9ULD9 1512 aaPredicted RBP29.81■■■□□ 2.36
DMD-208ENST00000378680 GRIN2BQ13224 1484 aa29.8■■■□□ 2.36
DMD-208ENST00000378680 RANGAP1P46060 587 aaPredicted RBP29.76■■■□□ 2.36
DMD-208ENST00000378680 EIF4G3O43432 1585 aaKnown RBP29.74■■■□□ 2.35
DMD-208ENST00000378680 FHAD1B1AJZ9 1412 aa29.71■■■□□ 2.35
DMD-208ENST00000378680 ADAMTS12P58397 1594 aa29.68■■■□□ 2.34
DMD-208ENST00000378680 CTTNBP2Q8WZ74 1663 aa29.66■■■□□ 2.34
DMD-208ENST00000378680 VPS8Q8N3P4 1428 aa29.62■■■□□ 2.33
DMD-208ENST00000378680 SNAPC4Q5SXM2 1469 aa29.59■■■□□ 2.33
DMD-208ENST00000378680 ARHGAP35Q9NRY4 1499 aa29.57■■■□□ 2.32
DMD-208ENST00000378680 ARAP1Q96P48 1450 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms