RNA–Protein interactions for RNA: ENST00000336990.8

PRELID3A-201, Transcript of PRELI domain containing 3A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRELID3A, Length 1,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRELID3A-201ENST00000336990 NISCHQ9Y2I1 1504 aa45.56■■■■■ 4.88
PRELID3A-201ENST00000336990 CCDC180Q9P1Z9 1646 aa40.11■■■■■ 4.01
PRELID3A-201ENST00000336990 ABCC9O60706 1549 aa38.72■■■■□ 3.79
PRELID3A-201ENST00000336990 ZCCHC6Q5VYS8 1495 aaKnown RBP38.1■■■■□ 3.69
PRELID3A-201ENST00000336990 DCAF8L2P0C7V8 631 aa37.87■■■■□ 3.65
PRELID3A-201ENST00000336990 DCAF1Q9Y4B6 1507 aa37.68■■■■□ 3.62
PRELID3A-201ENST00000336990 NACADO15069 1562 aa37.59■■■■□ 3.61
PRELID3A-201ENST00000336990 MYO15BQ96JP2 1530 aa37.58■■■■□ 3.61
PRELID3A-201ENST00000336990 RB1CC1Q8TDY2 1594 aa37.47■■■■□ 3.59
PRELID3A-201ENST00000336990 SCRIBQ14160 1630 aa36.75■■■■□ 3.47
PRELID3A-201ENST00000336990 UNC13AQ9UPW8 1703 aa36.6■■■■□ 3.45
PRELID3A-201ENST00000336990 SHROOM4Q9ULL8 1493 aa36.49■■■■□ 3.43
PRELID3A-201ENST00000336990 BICRAQ9NZM4 1560 aa36.35■■■■□ 3.41
PRELID3A-201ENST00000336990 PABPN1Q86U42 306 aaKnown RBP eCLIP36.34■■■■□ 3.41
PRELID3A-201ENST00000336990 CECR2Q9BXF3 1484 aa35.46■■■■□ 3.27
PRELID3A-201ENST00000336990 EIF4G1Q04637 1599 aaKnown RBP35.34■■■■□ 3.25
PRELID3A-201ENST00000336990 BAZ1AQ9NRL2 1556 aaPredicted RBP35.25■■■■□ 3.23
PRELID3A-201ENST00000336990 SMARCA4P51532 1647 aa35.18■■■■□ 3.22
PRELID3A-201ENST00000336990 MROH2BQ7Z745 1585 aa35.15■■■■□ 3.22
PRELID3A-201ENST00000336990 CC2D2AQ9P2K1 1620 aa35.02■■■■□ 3.2
PRELID3A-201ENST00000336990 RSF1Q96T23 1441 aaPredicted RBP35■■■■□ 3.19
PRELID3A-201ENST00000336990 DNAJC5BQ9UF47 199 aa34.96■■■■□ 3.19
PRELID3A-201ENST00000336990 ATAD2BQ9ULI0 1458 aa34.85■■■■□ 3.17
PRELID3A-201ENST00000336990 PEG3Q9GZU2 1588 aa34.82■■■■□ 3.16
PRELID3A-201ENST00000336990 SMARCA2P51531 1590 aa34.8■■■■□ 3.16
PRELID3A-201ENST00000336990 WIZO95785 1651 aa34.78■■■■□ 3.16
PRELID3A-201ENST00000336990 NCAPD3P42695 1498 aa34.72■■■■□ 3.15
PRELID3A-201ENST00000336990 SUPT5HO00267 1087 aaKnown RBP34.67■■■■□ 3.14
PRELID3A-201ENST00000336990 BAZ1BQ9UIG0 1483 aaKnown RBP34.6■■■■□ 3.13
PRELID3A-201ENST00000336990 HMGXB3Q12766 1538 aa34.58■■■■□ 3.13
PRELID3A-201ENST00000336990 TOP2AP11388 1531 aaKnown RBP34.44■■■■□ 3.1
PRELID3A-201ENST00000336990 CCDC88BA6NC98 1476 aa34.07■■■■□ 3.04
PRELID3A-201ENST00000336990 CADPSQ9ULU8 1353 aa33.76■■■■□ 3
PRELID3A-201ENST00000336990 NESP48681 1621 aa33.72■■■□□ 2.99
PRELID3A-201ENST00000336990 CFTRP13569 1480 aa33.7■■■□□ 2.98
PRELID3A-201ENST00000336990 LAMC3Q9Y6N6 1575 aa33.66■■■□□ 2.98
PRELID3A-201ENST00000336990 PDS5BQ9NTI5 1447 aa33.44■■■□□ 2.94
PRELID3A-201ENST00000336990 PRDM2Q13029 1718 aa33.38■■■□□ 2.93
PRELID3A-201ENST00000336990 FANCD2Q9BXW9 1451 aa33.37■■■□□ 2.93
PRELID3A-201ENST00000336990 ERCC6Q03468 1493 aa33.29■■■□□ 2.92
PRELID3A-201ENST00000336990 KIF21AQ7Z4S6 1674 aa33.27■■■□□ 2.92
PRELID3A-201ENST00000336990 CEP164Q9UPV0 1460 aa33.25■■■□□ 2.91
PRELID3A-201ENST00000336990 MRC2Q9UBG0 1479 aa33.06■■■□□ 2.88
PRELID3A-201ENST00000336990 ABCC8Q09428 1581 aa33.05■■■□□ 2.88
PRELID3A-201ENST00000336990 THOC2Q8NI27 1593 aaKnown RBP33■■■□□ 2.87
PRELID3A-201ENST00000336990 URB2Q14146 1524 aaKnown RBP33■■■□□ 2.87
PRELID3A-201ENST00000336990 WRNQ14191 1432 aaPredicted RBP eCLIP32.97■■■□□ 2.87
PRELID3A-201ENST00000336990 CUX1P39880 1505 aa32.93■■■□□ 2.86
PRELID3A-201ENST00000336990 WDR62O43379 1518 aa32.92■■■□□ 2.86
PRELID3A-201ENST00000336990 TOPBP1Q92547 1522 aa32.91■■■□□ 2.86
PRELID3A-201ENST00000336990 DNMBPQ6XZF7 1577 aa32.9■■■□□ 2.86
PRELID3A-201ENST00000336990 SYNJ1O43426 1573 aa32.85■■■□□ 2.85
PRELID3A-201ENST00000336990 TOP2BQ02880 1626 aa32.79■■■□□ 2.84
PRELID3A-201ENST00000336990 BIVM-ERCC5R4GMW8 1640 aa32.76■■■□□ 2.83
PRELID3A-201ENST00000336990 CHIC1Q5VXU3 224 aa32.75■■■□□ 2.83
PRELID3A-201ENST00000336990 FGD5Q6ZNL6 1462 aa32.71■■■□□ 2.83
PRELID3A-201ENST00000336990 POLA1P09884 1462 aaPredicted RBP32.69■■■□□ 2.82
PRELID3A-201ENST00000336990 TRIM41Q8WV44 630 aa32.68■■■□□ 2.82
PRELID3A-201ENST00000336990 CUX2O14529 1486 aa32.66■■■□□ 2.82
PRELID3A-201ENST00000336990 SOGA1O94964 1423 aa32.56■■■□□ 2.8
PRELID3A-201ENST00000336990 RAD54L2Q9Y4B4 1467 aa32.56■■■□□ 2.8
PRELID3A-201ENST00000336990 IFT140Q96RY7 1462 aa32.52■■■□□ 2.8
PRELID3A-201ENST00000336990 TARBP1Q13395 1621 aaKnown RBP32.48■■■□□ 2.79
PRELID3A-201ENST00000336990 ABCA10Q8WWZ4 1543 aa32.41■■■□□ 2.78
PRELID3A-201ENST00000336990 ZNF608Q9ULD9 1512 aaPredicted RBP32.36■■■□□ 2.77
PRELID3A-201ENST00000336990 WDR97A6NE52 1622 aa32.35■■■□□ 2.77
PRELID3A-201ENST00000336990 TDRD9Q8NDG6 1382 aaKnown RBP32.33■■■□□ 2.77
PRELID3A-201ENST00000336990 AQRO60306 1485 aaKnown RBP eCLIP32.27■■■□□ 2.76
PRELID3A-201ENST00000336990 EIF4G3O43432 1585 aaKnown RBP32.21■■■□□ 2.75
PRELID3A-201ENST00000336990 KIF27Q86VH2 1401 aa32.21■■■□□ 2.75
PRELID3A-201ENST00000336990 ABCA5Q8WWZ7 1642 aa32.2■■■□□ 2.74
PRELID3A-201ENST00000336990 RUSC2Q8N2Y8 1516 aa32.19■■■□□ 2.74
PRELID3A-201ENST00000336990 GAPVD1Q14C86 1478 aa32.19■■■□□ 2.74
PRELID3A-201ENST00000336990 GRIN2BQ13224 1484 aa32.09■■■□□ 2.73
PRELID3A-201ENST00000336990 FAM9AQ8IZU1 332 aaPredicted RBP32.04■■■□□ 2.72
PRELID3A-201ENST00000336990 EEA1Q15075 1411 aa32.03■■■□□ 2.72
PRELID3A-201ENST00000336990 IGF1RP08069 1367 aa32.03■■■□□ 2.72
PRELID3A-201ENST00000336990 PBRM1Q86U86 1689 aa32.02■■■□□ 2.72
PRELID3A-201ENST00000336990 ERICH3Q5RHP9 1530 aa32.01■■■□□ 2.71
PRELID3A-201ENST00000336990 SNAPC4Q5SXM2 1469 aa31.96■■■□□ 2.71
PRELID3A-201ENST00000336990 CSRNP3Q8WYN3 585 aa31.94■■■□□ 2.7
PRELID3A-201ENST00000336990 MAGI1Q96QZ7 1491 aaPredicted RBP31.91■■■□□ 2.7
PRELID3A-201ENST00000336990 ADAMTS12P58397 1594 aa31.85■■■□□ 2.69
PRELID3A-201ENST00000336990 CARMIL1Q5VZK9 1371 aa31.84■■■□□ 2.69
PRELID3A-201ENST00000336990 FHAD1B1AJZ9 1412 aa31.84■■■□□ 2.69
PRELID3A-201ENST00000336990 CUL7Q14999 1698 aa31.83■■■□□ 2.69
PRELID3A-201ENST00000336990 SYNJ2O15056 1496 aa31.79■■■□□ 2.68
PRELID3A-201ENST00000336990 PRXQ9BXM0 1461 aa31.79■■■□□ 2.68
PRELID3A-201ENST00000336990 FBLN2P98095 1184 aa31.76■■■□□ 2.67
PRELID3A-201ENST00000336990 CHMP7Q8WUX9 453 aaPredicted RBP31.75■■■□□ 2.67
PRELID3A-201ENST00000336990 RAPGEF2Q9Y4G8 1499 aa31.72■■■□□ 2.67
PRELID3A-201ENST00000336990 GRIN2AQ12879 1464 aa31.68■■■□□ 2.66
PRELID3A-201ENST00000336990 CHD1O14646 1710 aa31.65■■■□□ 2.66
PRELID3A-201ENST00000336990 KIF21BO75037 1637 aa31.64■■■□□ 2.66
PRELID3A-201ENST00000336990 EHMT2Q96KQ7 1210 aa31.61■■■□□ 2.65
PRELID3A-201ENST00000336990 GOLGA3Q08378 1498 aa31.54■■■□□ 2.64
PRELID3A-201ENST00000336990 NUP160Q12769 1436 aa31.51■■■□□ 2.64
PRELID3A-201ENST00000336990 CEP170Q5SW79 1584 aa31.5■■■□□ 2.63
PRELID3A-201ENST00000336990 OSCARQ8IYS5 282 aa31.48■■■□□ 2.63
PRELID3A-201ENST00000336990 LOC105371045A0A1W2PR82 267 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms