RNA–Protein interactions for RNA: ENST00000476941.5

TRPC1-203, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPC1, Length 3,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-203ENST00000476941 NISCHQ9Y2I1 1504 aa38.34■■■■□ 3.73
TRPC1-203ENST00000476941 SHROOM4Q9ULL8 1493 aa33.48■■■□□ 2.95
TRPC1-203ENST00000476941 SUPT5HO00267 1087 aaKnown RBP32.9■■■□□ 2.86
TRPC1-203ENST00000476941 DCAF8L2P0C7V8 631 aa32.75■■■□□ 2.83
TRPC1-203ENST00000476941 ZCCHC6Q5VYS8 1495 aaKnown RBP32.36■■■□□ 2.77
TRPC1-203ENST00000476941 CCDC180Q9P1Z9 1646 aa32.22■■■□□ 2.75
TRPC1-203ENST00000476941 HRCP23327 699 aa32.08■■■□□ 2.73
TRPC1-203ENST00000476941 CHIC1Q5VXU3 224 aa31.65■■■□□ 2.66
TRPC1-203ENST00000476941 PPARGC1BQ86YN6 1023 aaKnown RBP31.47■■■□□ 2.63
TRPC1-203ENST00000476941 MYO15BQ96JP2 1530 aa31.46■■■□□ 2.63
TRPC1-203ENST00000476941 PCGF6Q9BYE7 350 aa31.46■■■□□ 2.63
TRPC1-203ENST00000476941 DCAF1Q9Y4B6 1507 aa31.11■■■□□ 2.57
TRPC1-203ENST00000476941 PELP1Q8IZL8 1130 aaKnown RBP31.05■■■□□ 2.56
TRPC1-203ENST00000476941 LOC105371045A0A1W2PR82 267 aa31■■■□□ 2.55
TRPC1-203ENST00000476941 SCRIBQ14160 1630 aa30.76■■■□□ 2.52
TRPC1-203ENST00000476941 ABCC9O60706 1549 aa30.56■■■□□ 2.48
TRPC1-203ENST00000476941 EHMT2Q96KQ7 1210 aa30.53■■■□□ 2.48
TRPC1-203ENST00000476941 FAM9AQ8IZU1 332 aaPredicted RBP30.52■■■□□ 2.48
TRPC1-203ENST00000476941 RSF1Q96T23 1441 aaPredicted RBP30.5■■■□□ 2.47
TRPC1-203ENST00000476941 TRIM41Q8WV44 630 aa30.43■■■□□ 2.46
TRPC1-203ENST00000476941 SCAF1Q9H7N4 1312 aaKnown RBP30.4■■■□□ 2.46
TRPC1-203ENST00000476941 TRIM26Q12899 539 aaPredicted RBP30.38■■■□□ 2.45
TRPC1-203ENST00000476941 RB1CC1Q8TDY2 1594 aa30.19■■■□□ 2.42
TRPC1-203ENST00000476941 CECR2Q9BXF3 1484 aa30.16■■■□□ 2.42
TRPC1-203ENST00000476941 ZEB1P37275 1124 aaPredicted RBP30.15■■■□□ 2.42
TRPC1-203ENST00000476941 NACADO15069 1562 aa29.96■■■□□ 2.39
TRPC1-203ENST00000476941 MROH2BQ7Z745 1585 aa29.95■■■□□ 2.39
TRPC1-203ENST00000476941 MYT1Q01538 1121 aa29.84■■■□□ 2.37
TRPC1-203ENST00000476941 WIZO95785 1651 aa29.78■■■□□ 2.36
TRPC1-203ENST00000476941 ACIN1Q9UKV3 1341 aaKnown RBP29.64■■■□□ 2.34
TRPC1-203ENST00000476941 NEUROD1Q13562 356 aa29.57■■■□□ 2.32
TRPC1-203ENST00000476941 TTBK1Q5TCY1 1321 aaPredicted RBP29.49■■■□□ 2.31
TRPC1-203ENST00000476941 PABPN1Q86U42 306 aaKnown RBP eCLIP29.49■■■□□ 2.31
TRPC1-203ENST00000476941 GTF3C3Q9Y5Q9 886 aa29.44■■■□□ 2.3
TRPC1-203ENST00000476941 BAZ1AQ9NRL2 1556 aaPredicted RBP29.41■■■□□ 2.3
TRPC1-203ENST00000476941 CENPBP07199 599 aaPredicted RBP29.3■■■□□ 2.28
TRPC1-203ENST00000476941 ABCC8Q09428 1581 aa29.29■■■□□ 2.28
TRPC1-203ENST00000476941 CCDC88BA6NC98 1476 aa29.23■■■□□ 2.27
TRPC1-203ENST00000476941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.2■■■□□ 2.27
TRPC1-203ENST00000476941 SMARCA4P51532 1647 aa29.15■■■□□ 2.26
TRPC1-203ENST00000476941 TOP2AP11388 1531 aaKnown RBP29.13■■■□□ 2.25
TRPC1-203ENST00000476941 DIEXFQ68CQ4 756 aaKnown RBP29.13■■■□□ 2.25
TRPC1-203ENST00000476941 UBTFP17480 764 aaKnown RBP29.11■■■□□ 2.25
TRPC1-203ENST00000476941 CCER1Q8TC90 406 aaPredicted RBP29.1■■■□□ 2.25
TRPC1-203ENST00000476941 SOGA1O94964 1423 aa29.07■■■□□ 2.24
TRPC1-203ENST00000476941 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
TRPC1-203ENST00000476941 SMARCA2P51531 1590 aa29.03■■■□□ 2.24
TRPC1-203ENST00000476941 UNC13AQ9UPW8 1703 aa29.02■■■□□ 2.24
TRPC1-203ENST00000476941 CSRNP3Q8WYN3 585 aa28.94■■■□□ 2.22
TRPC1-203ENST00000476941 RUSC2Q8N2Y8 1516 aa28.93■■■□□ 2.22
TRPC1-203ENST00000476941 CEP162Q5TB80 1403 aa28.88■■■□□ 2.21
TRPC1-203ENST00000476941 RANGAP1P46060 587 aaPredicted RBP28.88■■■□□ 2.21
TRPC1-203ENST00000476941 BICRAQ9NZM4 1560 aa28.75■■■□□ 2.19
TRPC1-203ENST00000476941 YTHDC1Q96MU7 727 aaKnown RBP28.74■■■□□ 2.19
TRPC1-203ENST00000476941 TNIKQ9UKE5 1360 aa28.71■■■□□ 2.19
TRPC1-203ENST00000476941 WRNQ14191 1432 aaPredicted RBP eCLIP28.71■■■□□ 2.19
TRPC1-203ENST00000476941 HNRNPUL2Q1KMD3 747 aaKnown RBP28.56■■■□□ 2.16
TRPC1-203ENST00000476941 EEA1Q15075 1411 aa28.56■■■□□ 2.16
TRPC1-203ENST00000476941 GOLGA3Q08378 1498 aa28.55■■■□□ 2.16
TRPC1-203ENST00000476941 ZNF316A6NFI3 1004 aaPredicted RBP28.53■■■□□ 2.16
TRPC1-203ENST00000476941 BAZ1BQ9UIG0 1483 aaKnown RBP28.51■■■□□ 2.15
TRPC1-203ENST00000476941 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
TRPC1-203ENST00000476941 SYNJ1O43426 1573 aa28.46■■■□□ 2.15
TRPC1-203ENST00000476941 APLP2Q06481 763 aa28.41■■■□□ 2.14
TRPC1-203ENST00000476941 CLIP1P30622 1438 aa28.37■■■□□ 2.13
TRPC1-203ENST00000476941 MIER1Q8N108 512 aa28.37■■■□□ 2.13
TRPC1-203ENST00000476941 CEP164Q9UPV0 1460 aa28.35■■■□□ 2.13
TRPC1-203ENST00000476941 PEG3Q9GZU2 1588 aa28.34■■■□□ 2.13
TRPC1-203ENST00000476941 RAPGEF2Q9Y4G8 1499 aa28.29■■■□□ 2.12
TRPC1-203ENST00000476941 VPS8Q8N3P4 1428 aa28.12■■■□□ 2.09
TRPC1-203ENST00000476941 KIF21BO75037 1637 aa28.11■■■□□ 2.09
TRPC1-203ENST00000476941 SUPT16HQ9Y5B9 1047 aaKnown RBP27.98■■■□□ 2.07
TRPC1-203ENST00000476941 ANP32EQ9BTT0 268 aa27.97■■■□□ 2.07
TRPC1-203ENST00000476941 BCL11AQ9H165 835 aa27.97■■■□□ 2.07
TRPC1-203ENST00000476941 TOP2BQ02880 1626 aa27.96■■■□□ 2.07
TRPC1-203ENST00000476941 KANK4Q5T7N3 995 aaPredicted RBP27.95■■■□□ 2.06
TRPC1-203ENST00000476941 ITGAEP38570 1179 aa27.93■■■□□ 2.06
TRPC1-203ENST00000476941 CLSPNQ9HAW4 1339 aa27.87■■■□□ 2.05
TRPC1-203ENST00000476941 TSHZ2Q9NRE2 1034 aa27.87■■■□□ 2.05
TRPC1-203ENST00000476941 NCAPD3P42695 1498 aa27.83■■■□□ 2.05
TRPC1-203ENST00000476941 CUX1P39880 1505 aa27.83■■■□□ 2.05
TRPC1-203ENST00000476941 KIF27Q86VH2 1401 aa27.8■■■□□ 2.04
TRPC1-203ENST00000476941 PRXQ9BXM0 1461 aa27.79■■■□□ 2.04
TRPC1-203ENST00000476941 ARAP1Q96P48 1450 aa27.75■■■□□ 2.03
TRPC1-203ENST00000476941 BIVM-ERCC5R4GMW8 1640 aa27.75■■■□□ 2.03
TRPC1-203ENST00000476941 ATP1B4Q9UN42 357 aaPredicted RBP27.71■■■□□ 2.03
TRPC1-203ENST00000476941 HMGXB3Q12766 1538 aa27.69■■■□□ 2.02
TRPC1-203ENST00000476941 P3H3Q8IVL6 736 aa27.68■■■□□ 2.02
TRPC1-203ENST00000476941 CFTRP13569 1480 aa27.67■■■□□ 2.02
TRPC1-203ENST00000476941 ERICH3Q5RHP9 1530 aa27.65■■■□□ 2.02
TRPC1-203ENST00000476941 CUX2O14529 1486 aa27.63■■■□□ 2.01
TRPC1-203ENST00000476941 DHX57Q6P158 1386 aaKnown RBP27.57■■■□□ 2
TRPC1-203ENST00000476941 ARHGAP35Q9NRY4 1499 aa27.54■■■□□ 2
TRPC1-203ENST00000476941 IGF1RP08069 1367 aa27.52■■■□□ 2
TRPC1-203ENST00000476941 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
TRPC1-203ENST00000476941 CARMIL1Q5VZK9 1371 aa27.47■■□□□ 1.99
TRPC1-203ENST00000476941 CCNB3Q8WWL7 1395 aa27.47■■□□□ 1.99
TRPC1-203ENST00000476941 FAM50AQ14320 339 aaKnown RBP27.47■■□□□ 1.99
TRPC1-203ENST00000476941 BCANQ96GW7 911 aa27.46■■□□□ 1.99
TRPC1-203ENST00000476941 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms