Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV6-8A0A0A6YYG3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
TRBV6-8A0A0A6YYG3 AL356512.1-201ENST00000607453 1739 ntBASIC22.95■■□□□ 1.26
TRBV6-8A0A0A6YYG3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC22.87■■□□□ 1.25
TRBV6-8A0A0A6YYG3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.85■■□□□ 1.25
TRBV6-8A0A0A6YYG3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
TRBV6-8A0A0A6YYG3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRBV6-8A0A0A6YYG3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC22.61■■□□□ 1.21
TRBV6-8A0A0A6YYG3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV6-8A0A0A6YYG3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRBV6-8A0A0A6YYG3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC22.41■■□□□ 1.18
TRBV6-8A0A0A6YYG3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
TRBV6-8A0A0A6YYG3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRBV6-8A0A0A6YYG3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC22.01■■□□□ 1.11
TRBV6-8A0A0A6YYG3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRBV6-8A0A0A6YYG3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.88■■□□□ 1.09
TRBV6-8A0A0A6YYG3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRBV6-8A0A0A6YYG3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
TRBV6-8A0A0A6YYG3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
TRBV6-8A0A0A6YYG3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBV6-8A0A0A6YYG3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRBV6-8A0A0A6YYG3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBV6-8A0A0A6YYG3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV6-8A0A0A6YYG3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
TRBV6-8A0A0A6YYG3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRBV6-8A0A0A6YYG3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC21.42■■□□□ 1.02
TRBV6-8A0A0A6YYG3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRBV6-8A0A0A6YYG3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
TRBV6-8A0A0A6YYG3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TRBV6-8A0A0A6YYG3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV6-8A0A0A6YYG3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TRBV6-8A0A0A6YYG3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRBV6-8A0A0A6YYG3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV6-8A0A0A6YYG3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
TRBV6-8A0A0A6YYG3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.23■□□□□ 0.99
TRBV6-8A0A0A6YYG3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV6-8A0A0A6YYG3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TRBV6-8A0A0A6YYG3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC21.18■□□□□ 0.98
TRBV6-8A0A0A6YYG3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV6-8A0A0A6YYG3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.08■□□□□ 0.96
TRBV6-8A0A0A6YYG3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TRBV6-8A0A0A6YYG3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.02■□□□□ 0.96
TRBV6-8A0A0A6YYG3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV6-8A0A0A6YYG3 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.87■□□□□ 0.93
TRBV6-8A0A0A6YYG3 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV6-8A0A0A6YYG3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV6-8A0A0A6YYG3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.86■□□□□ 0.93
TRBV6-8A0A0A6YYG3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRBV6-8A0A0A6YYG3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV6-8A0A0A6YYG3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.79■□□□□ 0.92
TRBV6-8A0A0A6YYG3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.76■□□□□ 0.91
TRBV6-8A0A0A6YYG3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV6-8A0A0A6YYG3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV6-8A0A0A6YYG3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV6-8A0A0A6YYG3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.64■□□□□ 0.9
TRBV6-8A0A0A6YYG3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV6-8A0A0A6YYG3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV6-8A0A0A6YYG3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV6-8A0A0A6YYG3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV6-8A0A0A6YYG3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV6-8A0A0A6YYG3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV6-8A0A0A6YYG3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV6-8A0A0A6YYG3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV6-8A0A0A6YYG3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV6-8A0A0A6YYG3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRBV6-8A0A0A6YYG3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV6-8A0A0A6YYG3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRBV6-8A0A0A6YYG3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.4■□□□□ 0.86
TRBV6-8A0A0A6YYG3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
TRBV6-8A0A0A6YYG3 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV6-8A0A0A6YYG3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV6-8A0A0A6YYG3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.33■□□□□ 0.85
TRBV6-8A0A0A6YYG3 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV6-8A0A0A6YYG3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-8A0A0A6YYG3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV6-8A0A0A6YYG3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV6-8A0A0A6YYG3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.27■□□□□ 0.84
TRBV6-8A0A0A6YYG3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRBV6-8A0A0A6YYG3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV6-8A0A0A6YYG3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV6-8A0A0A6YYG3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV6-8A0A0A6YYG3 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV6-8A0A0A6YYG3 AC145285.7-201ENST00000614819 1539 ntBASIC20.2■□□□□ 0.82
TRBV6-8A0A0A6YYG3 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV6-8A0A0A6YYG3 AC015813.7-201ENST00000623294 581 ntBASIC20.19■□□□□ 0.82
TRBV6-8A0A0A6YYG3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRBV6-8A0A0A6YYG3 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV6-8A0A0A6YYG3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC20.14■□□□□ 0.81
TRBV6-8A0A0A6YYG3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV6-8A0A0A6YYG3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-8A0A0A6YYG3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRBV6-8A0A0A6YYG3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRBV6-8A0A0A6YYG3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRBV6-8A0A0A6YYG3 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-8A0A0A6YYG3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20■□□□□ 0.79
TRBV6-8A0A0A6YYG3 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-8A0A0A6YYG3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
TRBV6-8A0A0A6YYG3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-8A0A0A6YYG3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRBV6-8A0A0A6YYG3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms