RNA–Protein interactions for RNA: ENST00000377399.2

SPSB1-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-203ENST00000377399 NISCHQ9Y2I1 1504 aa45.07■■■■■ 4.81
SPSB1-203ENST00000377399 CCDC180Q9P1Z9 1646 aa39.79■■■■□ 3.96
SPSB1-203ENST00000377399 ABCC9O60706 1549 aa39.37■■■■□ 3.89
SPSB1-203ENST00000377399 ZCCHC6Q5VYS8 1495 aaKnown RBP37.72■■■■□ 3.63
SPSB1-203ENST00000377399 RB1CC1Q8TDY2 1594 aa37.49■■■■□ 3.59
SPSB1-203ENST00000377399 DCAF8L2P0C7V8 631 aa37.4■■■■□ 3.58
SPSB1-203ENST00000377399 DCAF1Q9Y4B6 1507 aa37.32■■■■□ 3.57
SPSB1-203ENST00000377399 NACADO15069 1562 aa37.22■■■■□ 3.55
SPSB1-203ENST00000377399 MYO15BQ96JP2 1530 aa37.2■■■■□ 3.55
SPSB1-203ENST00000377399 DNAJC5BQ9UF47 199 aa37.01■■■■□ 3.52
SPSB1-203ENST00000377399 PABPN1Q86U42 306 aaKnown RBP eCLIP36.66■■■■□ 3.46
SPSB1-203ENST00000377399 UNC13AQ9UPW8 1703 aa36.54■■■■□ 3.44
SPSB1-203ENST00000377399 SCRIBQ14160 1630 aa36.39■■■■□ 3.42
SPSB1-203ENST00000377399 BICRAQ9NZM4 1560 aa36.33■■■■□ 3.41
SPSB1-203ENST00000377399 SHROOM4Q9ULL8 1493 aa36.12■■■■□ 3.37
SPSB1-203ENST00000377399 CC2D2AQ9P2K1 1620 aa35.57■■■■□ 3.28
SPSB1-203ENST00000377399 CECR2Q9BXF3 1484 aa35.51■■■■□ 3.28
SPSB1-203ENST00000377399 EIF4G1Q04637 1599 aaKnown RBP35.47■■■■□ 3.27
SPSB1-203ENST00000377399 BAZ1AQ9NRL2 1556 aaPredicted RBP34.92■■■■□ 3.18
SPSB1-203ENST00000377399 SMARCA4P51532 1647 aa34.84■■■■□ 3.17
SPSB1-203ENST00000377399 MROH2BQ7Z745 1585 aa34.74■■■■□ 3.15
SPSB1-203ENST00000377399 RSF1Q96T23 1441 aaPredicted RBP34.61■■■■□ 3.13
SPSB1-203ENST00000377399 SMARCA2P51531 1590 aa34.48■■■■□ 3.11
SPSB1-203ENST00000377399 PEG3Q9GZU2 1588 aa34.45■■■■□ 3.11
SPSB1-203ENST00000377399 ATAD2BQ9ULI0 1458 aa34.43■■■■□ 3.1
SPSB1-203ENST00000377399 WIZO95785 1651 aa34.43■■■■□ 3.1
SPSB1-203ENST00000377399 NCAPD3P42695 1498 aa34.37■■■■□ 3.09
SPSB1-203ENST00000377399 SUPT5HO00267 1087 aaKnown RBP34.36■■■■□ 3.09
SPSB1-203ENST00000377399 BAZ1BQ9UIG0 1483 aaKnown RBP34.25■■■■□ 3.07
SPSB1-203ENST00000377399 HMGXB3Q12766 1538 aa34.24■■■■□ 3.07
SPSB1-203ENST00000377399 TOP2AP11388 1531 aaKnown RBP34.14■■■■□ 3.06
SPSB1-203ENST00000377399 DNAJC5Q9H3Z4 198 aa34.12■■■■□ 3.05
SPSB1-203ENST00000377399 ERCC6Q03468 1493 aa34.05■■■■□ 3.04
SPSB1-203ENST00000377399 CUX2O14529 1486 aa34.02■■■■□ 3.04
SPSB1-203ENST00000377399 NESP48681 1621 aa33.78■■■■□ 3
SPSB1-203ENST00000377399 CCDC88BA6NC98 1476 aa33.68■■■□□ 2.98
SPSB1-203ENST00000377399 LAMC3Q9Y6N6 1575 aa33.6■■■□□ 2.97
SPSB1-203ENST00000377399 THOC2Q8NI27 1593 aaKnown RBP33.45■■■□□ 2.95
SPSB1-203ENST00000377399 PDS5BQ9NTI5 1447 aa33.44■■■□□ 2.94
SPSB1-203ENST00000377399 CADPSQ9ULU8 1353 aa33.34■■■□□ 2.93
SPSB1-203ENST00000377399 KIF21AQ7Z4S6 1674 aa33.33■■■□□ 2.93
SPSB1-203ENST00000377399 CFTRP13569 1480 aa33.3■■■□□ 2.92
SPSB1-203ENST00000377399 PRDM2Q13029 1718 aa33.19■■■□□ 2.9
SPSB1-203ENST00000377399 MRC2Q9UBG0 1479 aa33.11■■■□□ 2.89
SPSB1-203ENST00000377399 WDR62O43379 1518 aa33.02■■■□□ 2.88
SPSB1-203ENST00000377399 FANCD2Q9BXW9 1451 aa32.99■■■□□ 2.87
SPSB1-203ENST00000377399 CEP164Q9UPV0 1460 aa32.97■■■□□ 2.87
SPSB1-203ENST00000377399 ABCC8Q09428 1581 aa32.72■■■□□ 2.83
SPSB1-203ENST00000377399 WRNQ14191 1432 aaPredicted RBP eCLIP32.67■■■□□ 2.82
SPSB1-203ENST00000377399 URB2Q14146 1524 aaKnown RBP32.61■■■□□ 2.81
SPSB1-203ENST00000377399 DNMBPQ6XZF7 1577 aa32.59■■■□□ 2.81
SPSB1-203ENST00000377399 CUX1P39880 1505 aa32.56■■■□□ 2.8
SPSB1-203ENST00000377399 TRIM41Q8WV44 630 aa32.56■■■□□ 2.8
SPSB1-203ENST00000377399 TOPBP1Q92547 1522 aa32.54■■■□□ 2.8
SPSB1-203ENST00000377399 SYNJ1O43426 1573 aa32.53■■■□□ 2.8
SPSB1-203ENST00000377399 OSCARQ8IYS5 282 aa32.51■■■□□ 2.79
SPSB1-203ENST00000377399 TOP2BQ02880 1626 aa32.5■■■□□ 2.79
SPSB1-203ENST00000377399 BIVM-ERCC5R4GMW8 1640 aa32.5■■■□□ 2.79
SPSB1-203ENST00000377399 CHIC1Q5VXU3 224 aa32.46■■■□□ 2.79
SPSB1-203ENST00000377399 FGD5Q6ZNL6 1462 aa32.36■■■□□ 2.77
SPSB1-203ENST00000377399 IFT140Q96RY7 1462 aa32.33■■■□□ 2.77
SPSB1-203ENST00000377399 POLA1P09884 1462 aaPredicted RBP32.31■■■□□ 2.76
SPSB1-203ENST00000377399 ZNF608Q9ULD9 1512 aaPredicted RBP32.22■■■□□ 2.75
SPSB1-203ENST00000377399 SOGA1O94964 1423 aa32.18■■■□□ 2.74
SPSB1-203ENST00000377399 RAD54L2Q9Y4B4 1467 aa32.15■■■□□ 2.74
SPSB1-203ENST00000377399 TARBP1Q13395 1621 aaKnown RBP32.11■■■□□ 2.73
SPSB1-203ENST00000377399 ABCA10Q8WWZ4 1543 aa32.07■■■□□ 2.72
SPSB1-203ENST00000377399 WDR97A6NE52 1622 aa32.06■■■□□ 2.72
SPSB1-203ENST00000377399 EIF4G3O43432 1585 aaKnown RBP32.04■■■□□ 2.72
SPSB1-203ENST00000377399 RIMBP3CA6NJZ7 1639 aa31.98■■■□□ 2.71
SPSB1-203ENST00000377399 RIMBP3BA6NNM3 1639 aa31.98■■■□□ 2.71
SPSB1-203ENST00000377399 RIMBP3Q9UFD9 1639 aa31.98■■■□□ 2.71
SPSB1-203ENST00000377399 AQRO60306 1485 aaKnown RBP eCLIP31.95■■■□□ 2.7
SPSB1-203ENST00000377399 KIF27Q86VH2 1401 aa31.93■■■□□ 2.7
SPSB1-203ENST00000377399 TDRD9Q8NDG6 1382 aaKnown RBP31.9■■■□□ 2.7
SPSB1-203ENST00000377399 ARHGEF11O15085 1522 aa31.9■■■□□ 2.7
SPSB1-203ENST00000377399 ABCA5Q8WWZ7 1642 aa31.88■■■□□ 2.69
SPSB1-203ENST00000377399 GAPVD1Q14C86 1478 aa31.85■■■□□ 2.69
SPSB1-203ENST00000377399 EEA1Q15075 1411 aa31.84■■■□□ 2.69
SPSB1-203ENST00000377399 FBLN2P98095 1184 aa31.81■■■□□ 2.68
SPSB1-203ENST00000377399 CHD1O14646 1710 aa31.8■■■□□ 2.68
SPSB1-203ENST00000377399 RUSC2Q8N2Y8 1516 aa31.8■■■□□ 2.68
SPSB1-203ENST00000377399 PBRM1Q86U86 1689 aa31.77■■■□□ 2.68
SPSB1-203ENST00000377399 GRIN2BQ13224 1484 aa31.74■■■□□ 2.67
SPSB1-203ENST00000377399 FAM9AQ8IZU1 332 aaPredicted RBP31.74■■■□□ 2.67
SPSB1-203ENST00000377399 CYB5RLQ6IPT4 315 aa31.72■■■□□ 2.67
SPSB1-203ENST00000377399 ERICH3Q5RHP9 1530 aa31.71■■■□□ 2.67
SPSB1-203ENST00000377399 CSRNP3Q8WYN3 585 aa31.63■■■□□ 2.65
SPSB1-203ENST00000377399 IGF1RP08069 1367 aa31.63■■■□□ 2.65
SPSB1-203ENST00000377399 CUL7Q14999 1698 aa31.61■■■□□ 2.65
SPSB1-203ENST00000377399 SNAPC4Q5SXM2 1469 aa31.6■■■□□ 2.65
SPSB1-203ENST00000377399 CHMP7Q8WUX9 453 aaPredicted RBP31.59■■■□□ 2.65
SPSB1-203ENST00000377399 MAGI1Q96QZ7 1491 aaPredicted RBP31.59■■■□□ 2.65
SPSB1-203ENST00000377399 ARAP1Q96P48 1450 aa31.56■■■□□ 2.64
SPSB1-203ENST00000377399 ADAMTS12P58397 1594 aa31.55■■■□□ 2.64
SPSB1-203ENST00000377399 CARMIL1Q5VZK9 1371 aa31.52■■■□□ 2.64
SPSB1-203ENST00000377399 FHAD1B1AJZ9 1412 aa31.5■■■□□ 2.63
SPSB1-203ENST00000377399 SYNJ2O15056 1496 aa31.46■■■□□ 2.63
SPSB1-203ENST00000377399 PRXQ9BXM0 1461 aa31.46■■■□□ 2.63
SPSB1-203ENST00000377399 CLASP1Q7Z460 1538 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms