Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
BRCC3P46736 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRCC3P46736 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.32■□□□□ 0.84
BRCC3P46736 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BRCC3P46736 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BRCC3P46736 AC009947.2-201ENST00000444014 672 ntBASIC20.32■□□□□ 0.84
BRCC3P46736 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.32■□□□□ 0.84
BRCC3P46736 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRCC3P46736 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
BRCC3P46736 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BRCC3P46736 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRCC3P46736 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
BRCC3P46736 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.31■□□□□ 0.84
BRCC3P46736 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.31■□□□□ 0.84
BRCC3P46736 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.31■□□□□ 0.84
BRCC3P46736 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.31■□□□□ 0.84
BRCC3P46736 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.31■□□□□ 0.84
BRCC3P46736 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.31■□□□□ 0.84
BRCC3P46736 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 AC140113.3-201ENST00000605663 199 ntBASIC20.31■□□□□ 0.84
BRCC3P46736 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.31■□□□□ 0.84
BRCC3P46736 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.31■□□□□ 0.84
BRCC3P46736 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRCC3P46736 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.31■□□□□ 0.84
BRCC3P46736 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRCC3P46736 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRCC3P46736 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRCC3P46736 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRCC3P46736 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRCC3P46736 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRCC3P46736 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
BRCC3P46736 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BRCC3P46736 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRCC3P46736 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRCC3P46736 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.3■□□□□ 0.84
BRCC3P46736 AC092647.4-201ENST00000457211 535 ntBASIC20.3■□□□□ 0.84
BRCC3P46736 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BRCC3P46736 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.3■□□□□ 0.84
BRCC3P46736 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.3■□□□□ 0.84
BRCC3P46736 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.3■□□□□ 0.84
BRCC3P46736 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
BRCC3P46736 MYC-208ENST00000641036 567 ntBASIC20.3■□□□□ 0.84
BRCC3P46736 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
BRCC3P46736 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRCC3P46736 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.3■□□□□ 0.84
BRCC3P46736 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
BRCC3P46736 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.3■□□□□ 0.84
BRCC3P46736 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.3■□□□□ 0.84
BRCC3P46736 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BRCC3P46736 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.29■□□□□ 0.84
BRCC3P46736 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCC3P46736 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCC3P46736 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCC3P46736 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BRCC3P46736 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
BRCC3P46736 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCC3P46736 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCC3P46736 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.29■□□□□ 0.84
BRCC3P46736 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCC3P46736 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.29■□□□□ 0.84
BRCC3P46736 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.29■□□□□ 0.84
BRCC3P46736 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.29■□□□□ 0.84
BRCC3P46736 LINC01238-205ENST00000567549 1107 ntBASIC20.29■□□□□ 0.84
BRCC3P46736 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.29■□□□□ 0.84
BRCC3P46736 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
BRCC3P46736 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.29■□□□□ 0.84
BRCC3P46736 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCC3P46736 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCC3P46736 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.29■□□□□ 0.84
BRCC3P46736 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCC3P46736 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.29■□□□□ 0.84
BRCC3P46736 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCC3P46736 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCC3P46736 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.28■□□□□ 0.84
BRCC3P46736 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCC3P46736 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCC3P46736 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
BRCC3P46736 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCC3P46736 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRCC3P46736 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCC3P46736 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCC3P46736 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
BRCC3P46736 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.28■□□□□ 0.84
BRCC3P46736 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
BRCC3P46736 AL031133.1-201ENST00000406807 723 ntBASIC20.28■□□□□ 0.84
BRCC3P46736 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRCC3P46736 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.28■□□□□ 0.84
BRCC3P46736 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms