RNA–Protein interactions for RNA: ENST00000368460.7

PBXIP1-201, Transcript of PBX homeobox interacting protein 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PBXIP1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-201ENST00000368460 NISCHQ9Y2I1 1504 aa46.44■■■■■ 5.03
PBXIP1-201ENST00000368460 ABCC9O60706 1549 aa42.21■■■■■ 4.35
PBXIP1-201ENST00000368460 CCDC180Q9P1Z9 1646 aa41.83■■■■■ 4.29
PBXIP1-201ENST00000368460 RB1CC1Q8TDY2 1594 aa40.02■■■■■ 4
PBXIP1-201ENST00000368460 DNAJC5BQ9UF47 199 aa39.77■■■■□ 3.96
PBXIP1-201ENST00000368460 NACADO15069 1562 aa39.64■■■■□ 3.94
PBXIP1-201ENST00000368460 DCAF8L2P0C7V8 631 aa39.56■■■■□ 3.92
PBXIP1-201ENST00000368460 PABPN1Q86U42 306 aaKnown RBP eCLIP39.26■■■■□ 3.88
PBXIP1-201ENST00000368460 UNC13AQ9UPW8 1703 aa39.03■■■■□ 3.84
PBXIP1-201ENST00000368460 MYO15BQ96JP2 1530 aa38.92■■■■□ 3.82
PBXIP1-201ENST00000368460 BICRAQ9NZM4 1560 aa38.75■■■■□ 3.79
PBXIP1-201ENST00000368460 ZCCHC6Q5VYS8 1495 aaKnown RBP38.41■■■■□ 3.74
PBXIP1-201ENST00000368460 DCAF1Q9Y4B6 1507 aa38.31■■■■□ 3.72
PBXIP1-201ENST00000368460 SHROOM4Q9ULL8 1493 aa38.27■■■■□ 3.72
PBXIP1-201ENST00000368460 SCRIBQ14160 1630 aa38.15■■■■□ 3.7
PBXIP1-201ENST00000368460 CC2D2AQ9P2K1 1620 aa38.07■■■■□ 3.68
PBXIP1-201ENST00000368460 CECR2Q9BXF3 1484 aa38.05■■■■□ 3.68
PBXIP1-201ENST00000368460 EIF4G1Q04637 1599 aaKnown RBP37.9■■■■□ 3.66
PBXIP1-201ENST00000368460 DNAJC5Q9H3Z4 198 aa36.83■■■■□ 3.49
PBXIP1-201ENST00000368460 NCAPD3P42695 1498 aa36.56■■■■□ 3.44
PBXIP1-201ENST00000368460 ERCC6Q03468 1493 aa36.55■■■■□ 3.44
PBXIP1-201ENST00000368460 CUX2O14529 1486 aa36.5■■■■□ 3.43
PBXIP1-201ENST00000368460 ATAD2BQ9ULI0 1458 aa36.42■■■■□ 3.42
PBXIP1-201ENST00000368460 SMARCA2P51531 1590 aa36.36■■■■□ 3.41
PBXIP1-201ENST00000368460 SMARCA4P51532 1647 aa36.31■■■■□ 3.4
PBXIP1-201ENST00000368460 HMGXB3Q12766 1538 aa36.28■■■■□ 3.4
PBXIP1-201ENST00000368460 BAZ1BQ9UIG0 1483 aaKnown RBP36.12■■■■□ 3.37
PBXIP1-201ENST00000368460 BAZ1AQ9NRL2 1556 aaPredicted RBP36.12■■■■□ 3.37
PBXIP1-201ENST00000368460 NESP48681 1621 aa36.12■■■■□ 3.37
PBXIP1-201ENST00000368460 PEG3Q9GZU2 1588 aa35.9■■■■□ 3.34
PBXIP1-201ENST00000368460 LAMC3Q9Y6N6 1575 aa35.84■■■■□ 3.33
PBXIP1-201ENST00000368460 THOC2Q8NI27 1593 aaKnown RBP35.79■■■■□ 3.32
PBXIP1-201ENST00000368460 MROH2BQ7Z745 1585 aa35.77■■■■□ 3.32
PBXIP1-201ENST00000368460 PDS5BQ9NTI5 1447 aa35.69■■■■□ 3.3
PBXIP1-201ENST00000368460 KIF21AQ7Z4S6 1674 aa35.65■■■■□ 3.3
PBXIP1-201ENST00000368460 CADPSQ9ULU8 1353 aa35.48■■■■□ 3.27
PBXIP1-201ENST00000368460 MRC2Q9UBG0 1479 aa35.38■■■■□ 3.25
PBXIP1-201ENST00000368460 WIZO95785 1651 aa35.35■■■■□ 3.25
PBXIP1-201ENST00000368460 WDR62O43379 1518 aa35.25■■■■□ 3.23
PBXIP1-201ENST00000368460 TRIM41Q8WV44 630 aa35.23■■■■□ 3.23
PBXIP1-201ENST00000368460 CEP164Q9UPV0 1460 aa35.2■■■■□ 3.23
PBXIP1-201ENST00000368460 FANCD2Q9BXW9 1451 aa35.1■■■■□ 3.21
PBXIP1-201ENST00000368460 CFTRP13569 1480 aa34.97■■■■□ 3.19
PBXIP1-201ENST00000368460 RSF1Q96T23 1441 aaPredicted RBP34.92■■■■□ 3.18
PBXIP1-201ENST00000368460 TOP2AP11388 1531 aaKnown RBP34.9■■■■□ 3.18
PBXIP1-201ENST00000368460 OSCARQ8IYS5 282 aa34.84■■■■□ 3.17
PBXIP1-201ENST00000368460 URB2Q14146 1524 aaKnown RBP34.78■■■■□ 3.16
PBXIP1-201ENST00000368460 PRDM2Q13029 1718 aa34.62■■■■□ 3.13
PBXIP1-201ENST00000368460 CCDC88BA6NC98 1476 aa34.49■■■■□ 3.11
PBXIP1-201ENST00000368460 IFT140Q96RY7 1462 aa34.48■■■■□ 3.11
PBXIP1-201ENST00000368460 ZNF608Q9ULD9 1512 aaPredicted RBP34.41■■■■□ 3.1
PBXIP1-201ENST00000368460 TOPBP1Q92547 1522 aa34.38■■■■□ 3.09
PBXIP1-201ENST00000368460 RIMBP3CA6NJZ7 1639 aa34.35■■■■□ 3.09
PBXIP1-201ENST00000368460 RIMBP3BA6NNM3 1639 aa34.35■■■■□ 3.09
PBXIP1-201ENST00000368460 RIMBP3Q9UFD9 1639 aa34.35■■■■□ 3.09
PBXIP1-201ENST00000368460 ABCC8Q09428 1581 aa34.32■■■■□ 3.09
PBXIP1-201ENST00000368460 EIF4G3O43432 1585 aaKnown RBP34.23■■■■□ 3.07
PBXIP1-201ENST00000368460 DNMBPQ6XZF7 1577 aa34.23■■■■□ 3.07
PBXIP1-201ENST00000368460 ARHGEF11O15085 1522 aa34.21■■■■□ 3.07
PBXIP1-201ENST00000368460 AQRO60306 1485 aaKnown RBP eCLIP34.09■■■■□ 3.052e-7■■■■■ 33.7
PBXIP1-201ENST00000368460 FBLN2P98095 1184 aa34.08■■■■□ 3.05
PBXIP1-201ENST00000368460 CYB5RLQ6IPT4 315 aa34.06■■■■□ 3.04
PBXIP1-201ENST00000368460 CHD1O14646 1710 aa34.05■■■■□ 3.04
PBXIP1-201ENST00000368460 TARBP1Q13395 1621 aaKnown RBP34.04■■■■□ 3.04
PBXIP1-201ENST00000368460 POLA1P09884 1462 aaPredicted RBP34■■■■□ 3.03
PBXIP1-201ENST00000368460 RAD54L2Q9Y4B4 1467 aa33.89■■■■□ 3.02
PBXIP1-201ENST00000368460 SOGA1O94964 1423 aa33.88■■■■□ 3.01
PBXIP1-201ENST00000368460 TRHP20396 242 aaPredicted RBP33.88■■■■□ 3.01
PBXIP1-201ENST00000368460 TDRD9Q8NDG6 1382 aaKnown RBP33.85■■■■□ 3.01
PBXIP1-201ENST00000368460 ARAP1Q96P48 1450 aa33.83■■■■□ 3.01
PBXIP1-201ENST00000368460 FGD5Q6ZNL6 1462 aa33.76■■■■□ 3
PBXIP1-201ENST00000368460 SNAPC4Q5SXM2 1469 aa33.76■■■□□ 2.99
PBXIP1-201ENST00000368460 CHMP7Q8WUX9 453 aaPredicted RBP33.74■■■□□ 2.99
PBXIP1-201ENST00000368460 WDR97A6NE52 1622 aa33.72■■■□□ 2.99
PBXIP1-201ENST00000368460 SYNJ1O43426 1573 aa33.65■■■□□ 2.98
PBXIP1-201ENST00000368460 MAGI1Q96QZ7 1491 aaPredicted RBP33.64■■■□□ 2.98
PBXIP1-201ENST00000368460 CUX1P39880 1505 aa33.63■■■□□ 2.97
PBXIP1-201ENST00000368460 GRIN2BQ13224 1484 aa33.63■■■□□ 2.97
PBXIP1-201ENST00000368460 CLASP1Q7Z460 1538 aa33.59■■■□□ 2.97
PBXIP1-201ENST00000368460 SYNJ2O15056 1496 aa33.54■■■□□ 2.96
PBXIP1-201ENST00000368460 GAPVD1Q14C86 1478 aa33.46■■■□□ 2.95
PBXIP1-201ENST00000368460 PBRM1Q86U86 1689 aa33.45■■■□□ 2.95
PBXIP1-201ENST00000368460 ABCA10Q8WWZ4 1543 aa33.33■■■□□ 2.93
PBXIP1-201ENST00000368460 SUPT5HO00267 1087 aaKnown RBP33.3■■■□□ 2.92
PBXIP1-201ENST00000368460 ABCA5Q8WWZ7 1642 aa33.29■■■□□ 2.92
PBXIP1-201ENST00000368460 WRNQ14191 1432 aaPredicted RBP eCLIP33.2■■■□□ 2.91
PBXIP1-201ENST00000368460 GRIN2AQ12879 1464 aa33.18■■■□□ 2.9
PBXIP1-201ENST00000368460 AEBP2Q6ZN18 517 aaPredicted RBP33.17■■■□□ 2.9
PBXIP1-201ENST00000368460 ADAMTS12P58397 1594 aa33.09■■■□□ 2.89
PBXIP1-201ENST00000368460 ERCC6L2Q5T890 1561 aa33.04■■■□□ 2.88
PBXIP1-201ENST00000368460 CEP170Q5SW79 1584 aa33.04■■■□□ 2.88
PBXIP1-201ENST00000368460 NUP160Q12769 1436 aa33.03■■■□□ 2.88
PBXIP1-201ENST00000368460 TOP2BQ02880 1626 aa33.02■■■□□ 2.88
PBXIP1-201ENST00000368460 BIVM-ERCC5R4GMW8 1640 aa33.02■■■□□ 2.88
PBXIP1-201ENST00000368460 FHAD1B1AJZ9 1412 aa33.02■■■□□ 2.88
PBXIP1-201ENST00000368460 ERICH3Q5RHP9 1530 aa32.92■■■□□ 2.86
PBXIP1-201ENST00000368460 SHROOM2Q13796 1616 aa32.9■■■□□ 2.86
PBXIP1-201ENST00000368460 PRG4Q92954 1404 aaPredicted RBP32.81■■■□□ 2.84
PBXIP1-201ENST00000368460 JPH4Q96JJ6 628 aa32.76■■■□□ 2.83
PBXIP1-201ENST00000368460 NPM1P06748 294 aaKnown RBP eCLIP32.68■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms