RNA–Protein interactions for RNA: ENST00000368632.6

HDAC2-201, Transcript of histone deacetylase 2, humanhuman

TSL 2 BASIC

Gene HDAC2, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-201ENST00000368632 NISCHQ9Y2I1 1504 aa41.74■■■■■ 4.27
HDAC2-201ENST00000368632 CCDC180Q9P1Z9 1646 aa35.58■■■■□ 3.29
HDAC2-201ENST00000368632 SHROOM4Q9ULL8 1493 aa35.47■■■■□ 3.27
HDAC2-201ENST00000368632 ZCCHC6Q5VYS8 1495 aaKnown RBP35.35■■■■□ 3.25
HDAC2-201ENST00000368632 SUPT5HO00267 1087 aaKnown RBP34.82■■■■□ 3.16
HDAC2-201ENST00000368632 DCAF8L2P0C7V8 631 aa34.37■■■■□ 3.09
HDAC2-201ENST00000368632 DCAF1Q9Y4B6 1507 aa34.33■■■■□ 3.09
HDAC2-201ENST00000368632 CHIC1Q5VXU3 224 aa33.95■■■■□ 3.03
HDAC2-201ENST00000368632 MYO15BQ96JP2 1530 aa33.86■■■■□ 3.01
HDAC2-201ENST00000368632 ABCC9O60706 1549 aa33.41■■■□□ 2.94
HDAC2-201ENST00000368632 SCRIBQ14160 1630 aa33.23■■■□□ 2.91
HDAC2-201ENST00000368632 HRCP23327 699 aa33.07■■■□□ 2.88
HDAC2-201ENST00000368632 RSF1Q96T23 1441 aaPredicted RBP33.01■■■□□ 2.88
HDAC2-201ENST00000368632 PCGF6Q9BYE7 350 aa32.93■■■□□ 2.86
HDAC2-201ENST00000368632 LOC105371045A0A1W2PR82 267 aa32.87■■■□□ 2.85
HDAC2-201ENST00000368632 NACADO15069 1562 aa32.81■■■□□ 2.84
HDAC2-201ENST00000368632 RB1CC1Q8TDY2 1594 aa32.75■■■□□ 2.83
HDAC2-201ENST00000368632 TRIM41Q8WV44 630 aa32.49■■■□□ 2.79
HDAC2-201ENST00000368632 CECR2Q9BXF3 1484 aa32.47■■■□□ 2.79
HDAC2-201ENST00000368632 MROH2BQ7Z745 1585 aa32.42■■■□□ 2.78
HDAC2-201ENST00000368632 TRIM26Q12899 539 aaPredicted RBP32.38■■■□□ 2.77
HDAC2-201ENST00000368632 WIZO95785 1651 aa32.27■■■□□ 2.76
HDAC2-201ENST00000368632 PPARGC1BQ86YN6 1023 aaKnown RBP32.25■■■□□ 2.75
HDAC2-201ENST00000368632 BAZ1AQ9NRL2 1556 aaPredicted RBP32.15■■■□□ 2.74
HDAC2-201ENST00000368632 FAM9AQ8IZU1 332 aaPredicted RBP32.14■■■□□ 2.74
HDAC2-201ENST00000368632 EIF4G1Q04637 1599 aaKnown RBP31.94■■■□□ 2.7
HDAC2-201ENST00000368632 TOP2AP11388 1531 aaKnown RBP31.82■■■□□ 2.68
HDAC2-201ENST00000368632 SMARCA4P51532 1647 aa31.81■■■□□ 2.68
HDAC2-201ENST00000368632 EHMT2Q96KQ7 1210 aa31.8■■■□□ 2.68
HDAC2-201ENST00000368632 UNC13AQ9UPW8 1703 aa31.79■■■□□ 2.68
HDAC2-201ENST00000368632 ZEB1P37275 1124 aaPredicted RBP31.77■■■□□ 2.68
HDAC2-201ENST00000368632 SMARCA2P51531 1590 aa31.63■■■□□ 2.65
HDAC2-201ENST00000368632 CCDC88BA6NC98 1476 aa31.61■■■□□ 2.65
HDAC2-201ENST00000368632 ABCC8Q09428 1581 aa31.55■■■□□ 2.64
HDAC2-201ENST00000368632 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
HDAC2-201ENST00000368632 SOGA1O94964 1423 aa31.23■■■□□ 2.59
HDAC2-201ENST00000368632 EEA1Q15075 1411 aa31.22■■■□□ 2.59
HDAC2-201ENST00000368632 PEG3Q9GZU2 1588 aa31.22■■■□□ 2.59
HDAC2-201ENST00000368632 WRNQ14191 1432 aaPredicted RBP eCLIP31.21■■■□□ 2.59
HDAC2-201ENST00000368632 PABPN1Q86U42 306 aaKnown RBP eCLIP31.2■■■□□ 2.58
HDAC2-201ENST00000368632 CEP162Q5TB80 1403 aa31.18■■■□□ 2.58
HDAC2-201ENST00000368632 TNIKQ9UKE5 1360 aa31.14■■■□□ 2.58
HDAC2-201ENST00000368632 CSRNP3Q8WYN3 585 aa31.07■■■□□ 2.56
HDAC2-201ENST00000368632 RUSC2Q8N2Y8 1516 aa31.06■■■□□ 2.56
HDAC2-201ENST00000368632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.99■■■□□ 2.55
HDAC2-201ENST00000368632 GOLGA3Q08378 1498 aa30.98■■■□□ 2.55
HDAC2-201ENST00000368632 CCER1Q8TC90 406 aaPredicted RBP30.96■■■□□ 2.55
HDAC2-201ENST00000368632 UBTFP17480 764 aaKnown RBP30.92■■■□□ 2.54
HDAC2-201ENST00000368632 ATAD2BQ9ULI0 1458 aa30.91■■■□□ 2.54
HDAC2-201ENST00000368632 SYNJ1O43426 1573 aa30.89■■■□□ 2.54
HDAC2-201ENST00000368632 BAZ1BQ9UIG0 1483 aaKnown RBP30.85■■■□□ 2.53
HDAC2-201ENST00000368632 TTBK1Q5TCY1 1321 aaPredicted RBP30.83■■■□□ 2.53
HDAC2-201ENST00000368632 KIF21BO75037 1637 aa30.81■■■□□ 2.52
HDAC2-201ENST00000368632 CEP164Q9UPV0 1460 aa30.8■■■□□ 2.52
HDAC2-201ENST00000368632 CLIP1P30622 1438 aa30.58■■■□□ 2.49
HDAC2-201ENST00000368632 TOP2BQ02880 1626 aa30.55■■■□□ 2.48
HDAC2-201ENST00000368632 RAPGEF2Q9Y4G8 1499 aa30.49■■■□□ 2.47
HDAC2-201ENST00000368632 VPS8Q8N3P4 1428 aa30.49■■■□□ 2.47
HDAC2-201ENST00000368632 BIVM-ERCC5R4GMW8 1640 aa30.48■■■□□ 2.47
HDAC2-201ENST00000368632 SCAF1Q9H7N4 1312 aaKnown RBP30.46■■■□□ 2.47
HDAC2-201ENST00000368632 DIEXFQ68CQ4 756 aaKnown RBP30.4■■■□□ 2.46
HDAC2-201ENST00000368632 HMGXB3Q12766 1538 aa30.38■■■□□ 2.45
HDAC2-201ENST00000368632 NCAPD3P42695 1498 aa30.31■■■□□ 2.44
HDAC2-201ENST00000368632 ERICH3Q5RHP9 1530 aa30.3■■■□□ 2.44
HDAC2-201ENST00000368632 APLP2Q06481 763 aa30.3■■■□□ 2.44
HDAC2-201ENST00000368632 HNRNPUL2Q1KMD3 747 aaKnown RBP30.26■■■□□ 2.43
HDAC2-201ENST00000368632 PRXQ9BXM0 1461 aa30.23■■■□□ 2.43
HDAC2-201ENST00000368632 ACIN1Q9UKV3 1341 aaKnown RBP30.21■■■□□ 2.43
HDAC2-201ENST00000368632 RANGAP1P46060 587 aaPredicted RBP30.19■■■□□ 2.42
HDAC2-201ENST00000368632 CUX1P39880 1505 aa30.19■■■□□ 2.42
HDAC2-201ENST00000368632 ZNF316A6NFI3 1004 aaPredicted RBP30.18■■■□□ 2.42
HDAC2-201ENST00000368632 NEUROD1Q13562 356 aa30.11■■■□□ 2.41
HDAC2-201ENST00000368632 ARAP1Q96P48 1450 aa30.1■■■□□ 2.41
HDAC2-201ENST00000368632 CFTRP13569 1480 aa30.09■■■□□ 2.41
HDAC2-201ENST00000368632 KIF27Q86VH2 1401 aa30.08■■■□□ 2.41
HDAC2-201ENST00000368632 CENPBP07199 599 aaPredicted RBP30.08■■■□□ 2.41
HDAC2-201ENST00000368632 PELP1Q8IZL8 1130 aaKnown RBP30.03■■■□□ 2.4
HDAC2-201ENST00000368632 PRDM2Q13029 1718 aa30■■■□□ 2.39
HDAC2-201ENST00000368632 KANK4Q5T7N3 995 aaPredicted RBP29.84■■■□□ 2.37
HDAC2-201ENST00000368632 GTF3C3Q9Y5Q9 886 aa29.82■■■□□ 2.36
HDAC2-201ENST00000368632 ARHGAP35Q9NRY4 1499 aa29.82■■■□□ 2.36
HDAC2-201ENST00000368632 CLSPNQ9HAW4 1339 aa29.81■■■□□ 2.36
HDAC2-201ENST00000368632 RRBP1Q9P2E9 1410 aaKnown RBP29.8■■■□□ 2.36
HDAC2-201ENST00000368632 DHX57Q6P158 1386 aaKnown RBP29.76■■■□□ 2.36
HDAC2-201ENST00000368632 CUX2O14529 1486 aa29.75■■■□□ 2.35
HDAC2-201ENST00000368632 CADPSQ9ULU8 1353 aa29.71■■■□□ 2.35
HDAC2-201ENST00000368632 MIER1Q8N108 512 aa29.7■■■□□ 2.35
HDAC2-201ENST00000368632 IGF1RP08069 1367 aa29.69■■■□□ 2.34
HDAC2-201ENST00000368632 FGD5Q6ZNL6 1462 aa29.64■■■□□ 2.34
HDAC2-201ENST00000368632 CCNB3Q8WWL7 1395 aa29.63■■■□□ 2.33
HDAC2-201ENST00000368632 YTHDC1Q96MU7 727 aaKnown RBP29.62■■■□□ 2.33
HDAC2-201ENST00000368632 CARMIL1Q5VZK9 1371 aa29.58■■■□□ 2.33
HDAC2-201ENST00000368632 MAP3K1Q13233 1512 aa29.57■■■□□ 2.32
HDAC2-201ENST00000368632 TIAM1Q13009 1591 aa29.56■■■□□ 2.32
HDAC2-201ENST00000368632 CC2D2AQ9P2K1 1620 aa29.5■■■□□ 2.31
HDAC2-201ENST00000368632 FANCD2Q9BXW9 1451 aa29.45■■■□□ 2.3
HDAC2-201ENST00000368632 LRRC9Q6ZRR7 1453 aa29.41■■■□□ 2.3
HDAC2-201ENST00000368632 ITGAEP38570 1179 aa29.41■■■□□ 2.3
HDAC2-201ENST00000368632 FHAD1B1AJZ9 1412 aa29.4■■■□□ 2.3
HDAC2-201ENST00000368632 CFAP43Q8NDM7 1665 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms