RNA–Protein interactions for RNA: ENST00000336861.7

KRT13-202, Transcript of keratin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KRT13, Length 1,673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT13-202ENST00000336861 NISCHQ9Y2I1 1504 aa44.36■■■■■ 4.69
KRT13-202ENST00000336861 CCDC180Q9P1Z9 1646 aa38.95■■■■□ 3.83
KRT13-202ENST00000336861 ZCCHC6Q5VYS8 1495 aaKnown RBP37.2■■■■□ 3.54
KRT13-202ENST00000336861 ABCC9O60706 1549 aa37.14■■■■□ 3.54
KRT13-202ENST00000336861 DCAF1Q9Y4B6 1507 aa36.69■■■■□ 3.46
KRT13-202ENST00000336861 DCAF8L2P0C7V8 631 aa36.61■■■■□ 3.45
KRT13-202ENST00000336861 MYO15BQ96JP2 1530 aa36.42■■■■□ 3.42
KRT13-202ENST00000336861 NACADO15069 1562 aa36.32■■■■□ 3.4
KRT13-202ENST00000336861 RB1CC1Q8TDY2 1594 aa36.11■■■■□ 3.37
KRT13-202ENST00000336861 SHROOM4Q9ULL8 1493 aa35.79■■■■□ 3.32
KRT13-202ENST00000336861 SCRIBQ14160 1630 aa35.73■■■■□ 3.31
KRT13-202ENST00000336861 UNC13AQ9UPW8 1703 aa35.53■■■■□ 3.28
KRT13-202ENST00000336861 BICRAQ9NZM4 1560 aa35.11■■■■□ 3.21
KRT13-202ENST00000336861 PABPN1Q86U42 306 aaKnown RBP eCLIP34.89■■■■□ 3.18
KRT13-202ENST00000336861 CECR2Q9BXF3 1484 aa34.51■■■■□ 3.12
KRT13-202ENST00000336861 BAZ1AQ9NRL2 1556 aaPredicted RBP34.27■■■■□ 3.08
KRT13-202ENST00000336861 MROH2BQ7Z745 1585 aa34.27■■■■□ 3.08
KRT13-202ENST00000336861 SMARCA4P51532 1647 aa34.23■■■■□ 3.07
KRT13-202ENST00000336861 RSF1Q96T23 1441 aaPredicted RBP34.22■■■■□ 3.07
KRT13-202ENST00000336861 SUPT5HO00267 1087 aaKnown RBP34.15■■■■□ 3.06
KRT13-202ENST00000336861 EIF4G1Q04637 1599 aaKnown RBP34.04■■■■□ 3.04
KRT13-202ENST00000336861 WIZO95785 1651 aa34■■■■□ 3.03
KRT13-202ENST00000336861 PEG3Q9GZU2 1588 aa33.84■■■■□ 3.01
KRT13-202ENST00000336861 ATAD2BQ9ULI0 1458 aa33.73■■■□□ 2.99
KRT13-202ENST00000336861 SMARCA2P51531 1590 aa33.69■■■□□ 2.98
KRT13-202ENST00000336861 CC2D2AQ9P2K1 1620 aa33.65■■■□□ 2.98
KRT13-202ENST00000336861 TOP2AP11388 1531 aaKnown RBP33.6■■■□□ 2.97
KRT13-202ENST00000336861 NCAPD3P42695 1498 aa33.5■■■□□ 2.95
KRT13-202ENST00000336861 BAZ1BQ9UIG0 1483 aaKnown RBP33.5■■■□□ 2.95
KRT13-202ENST00000336861 HMGXB3Q12766 1538 aa33.46■■■□□ 2.95
KRT13-202ENST00000336861 CCDC88BA6NC98 1476 aa33.22■■■□□ 2.91
KRT13-202ENST00000336861 DNAJC5BQ9UF47 199 aa33.16■■■□□ 2.9
KRT13-202ENST00000336861 CFTRP13569 1480 aa32.64■■■□□ 2.82
KRT13-202ENST00000336861 PRDM2Q13029 1718 aa32.59■■■□□ 2.81
KRT13-202ENST00000336861 CADPSQ9ULU8 1353 aa32.58■■■□□ 2.81
KRT13-202ENST00000336861 CHIC1Q5VXU3 224 aa32.51■■■□□ 2.79
KRT13-202ENST00000336861 NESP48681 1621 aa32.51■■■□□ 2.79
KRT13-202ENST00000336861 LAMC3Q9Y6N6 1575 aa32.47■■■□□ 2.79
KRT13-202ENST00000336861 ABCC8Q09428 1581 aa32.42■■■□□ 2.78
KRT13-202ENST00000336861 FANCD2Q9BXW9 1451 aa32.25■■■□□ 2.75
KRT13-202ENST00000336861 WRNQ14191 1432 aaPredicted RBP eCLIP32.19■■■□□ 2.74
KRT13-202ENST00000336861 KIF21AQ7Z4S6 1674 aa32.18■■■□□ 2.74
KRT13-202ENST00000336861 SYNJ1O43426 1573 aa32.17■■■□□ 2.74
KRT13-202ENST00000336861 PDS5BQ9NTI5 1447 aa32.15■■■□□ 2.74
KRT13-202ENST00000336861 TRIM41Q8WV44 630 aa32.14■■■□□ 2.74
KRT13-202ENST00000336861 CEP164Q9UPV0 1460 aa32.09■■■□□ 2.73
KRT13-202ENST00000336861 CUX1P39880 1505 aa32.08■■■□□ 2.73
KRT13-202ENST00000336861 BIVM-ERCC5R4GMW8 1640 aa32.07■■■□□ 2.72
KRT13-202ENST00000336861 TOP2BQ02880 1626 aa32.06■■■□□ 2.72
KRT13-202ENST00000336861 DNMBPQ6XZF7 1577 aa31.92■■■□□ 2.7
KRT13-202ENST00000336861 URB2Q14146 1524 aaKnown RBP31.91■■■□□ 2.7
KRT13-202ENST00000336861 TOPBP1Q92547 1522 aa31.87■■■□□ 2.69
KRT13-202ENST00000336861 ERCC6Q03468 1493 aa31.85■■■□□ 2.69
KRT13-202ENST00000336861 MRC2Q9UBG0 1479 aa31.81■■■□□ 2.68
KRT13-202ENST00000336861 FGD5Q6ZNL6 1462 aa31.76■■■□□ 2.67
KRT13-202ENST00000336861 THOC2Q8NI27 1593 aaKnown RBP31.76■■■□□ 2.67
KRT13-202ENST00000336861 WDR62O43379 1518 aa31.71■■■□□ 2.67
KRT13-202ENST00000336861 POLA1P09884 1462 aaPredicted RBP31.68■■■□□ 2.66
KRT13-202ENST00000336861 SOGA1O94964 1423 aa31.67■■■□□ 2.66
KRT13-202ENST00000336861 RUSC2Q8N2Y8 1516 aa31.61■■■□□ 2.65
KRT13-202ENST00000336861 RAD54L2Q9Y4B4 1467 aa31.56■■■□□ 2.64
KRT13-202ENST00000336861 FAM9AQ8IZU1 332 aaPredicted RBP31.55■■■□□ 2.64
KRT13-202ENST00000336861 WDR97A6NE52 1622 aa31.52■■■□□ 2.64
KRT13-202ENST00000336861 CUX2O14529 1486 aa31.5■■■□□ 2.63
KRT13-202ENST00000336861 TARBP1Q13395 1621 aaKnown RBP31.49■■■□□ 2.63
KRT13-202ENST00000336861 ABCA10Q8WWZ4 1543 aa31.48■■■□□ 2.63
KRT13-202ENST00000336861 EEA1Q15075 1411 aa31.47■■■□□ 2.63
KRT13-202ENST00000336861 KIF27Q86VH2 1401 aa31.4■■■□□ 2.62
KRT13-202ENST00000336861 IFT140Q96RY7 1462 aa31.34■■■□□ 2.61
KRT13-202ENST00000336861 ABCA5Q8WWZ7 1642 aa31.32■■■□□ 2.6
KRT13-202ENST00000336861 CSRNP3Q8WYN3 585 aa31.31■■■□□ 2.6
KRT13-202ENST00000336861 TDRD9Q8NDG6 1382 aaKnown RBP31.25■■■□□ 2.59
KRT13-202ENST00000336861 LOC105371045A0A1W2PR82 267 aa31.24■■■□□ 2.59
KRT13-202ENST00000336861 ZNF608Q9ULD9 1512 aaPredicted RBP31.23■■■□□ 2.59
KRT13-202ENST00000336861 GAPVD1Q14C86 1478 aa31.19■■■□□ 2.58
KRT13-202ENST00000336861 IGF1RP08069 1367 aa31.18■■■□□ 2.58
KRT13-202ENST00000336861 KIF21BO75037 1637 aa31.18■■■□□ 2.58
KRT13-202ENST00000336861 PBRM1Q86U86 1689 aa31.16■■■□□ 2.58
KRT13-202ENST00000336861 AQRO60306 1485 aaKnown RBP eCLIP31.16■■■□□ 2.58
KRT13-202ENST00000336861 EIF4G3O43432 1585 aaKnown RBP31.15■■■□□ 2.58
KRT13-202ENST00000336861 PRXQ9BXM0 1461 aa31.13■■■□□ 2.57
KRT13-202ENST00000336861 EHMT2Q96KQ7 1210 aa31.13■■■□□ 2.57
KRT13-202ENST00000336861 ERICH3Q5RHP9 1530 aa31.1■■■□□ 2.57
KRT13-202ENST00000336861 RAPGEF2Q9Y4G8 1499 aa31.06■■■□□ 2.56
KRT13-202ENST00000336861 CUL7Q14999 1698 aa31.06■■■□□ 2.56
KRT13-202ENST00000336861 GOLGA3Q08378 1498 aa31.04■■■□□ 2.56
KRT13-202ENST00000336861 GRIN2BQ13224 1484 aa31.01■■■□□ 2.55
KRT13-202ENST00000336861 CARMIL1Q5VZK9 1371 aa31■■■□□ 2.55
KRT13-202ENST00000336861 ADAMTS12P58397 1594 aa30.93■■■□□ 2.54
KRT13-202ENST00000336861 SNAPC4Q5SXM2 1469 aa30.89■■■□□ 2.53
KRT13-202ENST00000336861 TNIKQ9UKE5 1360 aa30.84■■■□□ 2.53
KRT13-202ENST00000336861 UBTFP17480 764 aaKnown RBP30.84■■■□□ 2.53
KRT13-202ENST00000336861 FHAD1B1AJZ9 1412 aa30.83■■■□□ 2.53
KRT13-202ENST00000336861 MAGI1Q96QZ7 1491 aaPredicted RBP30.81■■■□□ 2.52
KRT13-202ENST00000336861 CTTNBP2Q8WZ74 1663 aa30.7■■■□□ 2.5
KRT13-202ENST00000336861 SYNJ2O15056 1496 aa30.69■■■□□ 2.5
KRT13-202ENST00000336861 CEP162Q5TB80 1403 aa30.66■■■□□ 2.5
KRT13-202ENST00000336861 GRIN2AQ12879 1464 aa30.66■■■□□ 2.5
KRT13-202ENST00000336861 CHD1O14646 1710 aa30.6■■■□□ 2.49
KRT13-202ENST00000336861 CHMP7Q8WUX9 453 aaPredicted RBP30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms