RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 NISCHQ9Y2I1 1504 aa44.34■■■■■ 4.69
PCCB-216ENST00000483687 CCDC180Q9P1Z9 1646 aa39.01■■■■□ 3.84
PCCB-216ENST00000483687 ABCC9O60706 1549 aa37.36■■■■□ 3.57
PCCB-216ENST00000483687 ZCCHC6Q5VYS8 1495 aaKnown RBP37.13■■■■□ 3.53
PCCB-216ENST00000483687 DCAF8L2P0C7V8 631 aa36.79■■■■□ 3.48
PCCB-216ENST00000483687 DCAF1Q9Y4B6 1507 aa36.68■■■■□ 3.46
PCCB-216ENST00000483687 MYO15BQ96JP2 1530 aa36.49■■■■□ 3.43
PCCB-216ENST00000483687 NACADO15069 1562 aa36.46■■■■□ 3.43
PCCB-216ENST00000483687 RB1CC1Q8TDY2 1594 aa36.3■■■■□ 3.4
PCCB-216ENST00000483687 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
PCCB-216ENST00000483687 SHROOM4Q9ULL8 1493 aa35.7■■■■□ 3.31
PCCB-216ENST00000483687 UNC13AQ9UPW8 1703 aa35.54■■■■□ 3.28
PCCB-216ENST00000483687 BICRAQ9NZM4 1560 aa35.16■■■■□ 3.22
PCCB-216ENST00000483687 PABPN1Q86U42 306 aaKnown RBP eCLIP35.09■■■■□ 3.21
PCCB-216ENST00000483687 CECR2Q9BXF3 1484 aa34.48■■■■□ 3.11
PCCB-216ENST00000483687 BAZ1AQ9NRL2 1556 aaPredicted RBP34.32■■■■□ 3.08
PCCB-216ENST00000483687 SMARCA4P51532 1647 aa34.24■■■■□ 3.07
PCCB-216ENST00000483687 MROH2BQ7Z745 1585 aa34.21■■■■□ 3.07
PCCB-216ENST00000483687 EIF4G1Q04637 1599 aaKnown RBP34.18■■■■□ 3.06
PCCB-216ENST00000483687 RSF1Q96T23 1441 aaPredicted RBP34.14■■■■□ 3.06
PCCB-216ENST00000483687 SUPT5HO00267 1087 aaKnown RBP34.05■■■■□ 3.04
PCCB-216ENST00000483687 WIZO95785 1651 aa33.93■■■■□ 3.02
PCCB-216ENST00000483687 PEG3Q9GZU2 1588 aa33.85■■■■□ 3.01
PCCB-216ENST00000483687 CC2D2AQ9P2K1 1620 aa33.83■■■■□ 3.01
PCCB-216ENST00000483687 SMARCA2P51531 1590 aa33.8■■■■□ 3
PCCB-216ENST00000483687 ATAD2BQ9ULI0 1458 aa33.8■■■■□ 3
PCCB-216ENST00000483687 NCAPD3P42695 1498 aa33.61■■■□□ 2.97
PCCB-216ENST00000483687 BAZ1BQ9UIG0 1483 aaKnown RBP33.6■■■□□ 2.97
PCCB-216ENST00000483687 TOP2AP11388 1531 aaKnown RBP33.57■■■□□ 2.97
PCCB-216ENST00000483687 HMGXB3Q12766 1538 aa33.55■■■□□ 2.96
PCCB-216ENST00000483687 DNAJC5BQ9UF47 199 aa33.44■■■□□ 2.94
PCCB-216ENST00000483687 CCDC88BA6NC98 1476 aa33.19■■■□□ 2.9
PCCB-216ENST00000483687 CADPSQ9ULU8 1353 aa32.71■■■□□ 2.83
PCCB-216ENST00000483687 CFTRP13569 1480 aa32.71■■■□□ 2.83
PCCB-216ENST00000483687 LAMC3Q9Y6N6 1575 aa32.61■■■□□ 2.81
PCCB-216ENST00000483687 NESP48681 1621 aa32.6■■■□□ 2.81
PCCB-216ENST00000483687 PRDM2Q13029 1718 aa32.58■■■□□ 2.81
PCCB-216ENST00000483687 FANCD2Q9BXW9 1451 aa32.36■■■□□ 2.77
PCCB-216ENST00000483687 PDS5BQ9NTI5 1447 aa32.36■■■□□ 2.77
PCCB-216ENST00000483687 ABCC8Q09428 1581 aa32.3■■■□□ 2.76
PCCB-216ENST00000483687 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.76
PCCB-216ENST00000483687 KIF21AQ7Z4S6 1674 aa32.26■■■□□ 2.75
PCCB-216ENST00000483687 CEP164Q9UPV0 1460 aa32.23■■■□□ 2.75
PCCB-216ENST00000483687 WRNQ14191 1432 aaPredicted RBP eCLIP32.18■■■□□ 2.74
PCCB-216ENST00000483687 ERCC6Q03468 1493 aa32.14■■■□□ 2.74
PCCB-216ENST00000483687 TRIM41Q8WV44 630 aa32.09■■■□□ 2.73
PCCB-216ENST00000483687 SYNJ1O43426 1573 aa32.07■■■□□ 2.72
PCCB-216ENST00000483687 CUX1P39880 1505 aa32.04■■■□□ 2.72
PCCB-216ENST00000483687 TOP2BQ02880 1626 aa32.01■■■□□ 2.71
PCCB-216ENST00000483687 BIVM-ERCC5R4GMW8 1640 aa31.99■■■□□ 2.71
PCCB-216ENST00000483687 MRC2Q9UBG0 1479 aa31.98■■■□□ 2.71
PCCB-216ENST00000483687 DNMBPQ6XZF7 1577 aa31.98■■■□□ 2.71
PCCB-216ENST00000483687 URB2Q14146 1524 aaKnown RBP31.97■■■□□ 2.71
PCCB-216ENST00000483687 TOPBP1Q92547 1522 aa31.94■■■□□ 2.7
PCCB-216ENST00000483687 THOC2Q8NI27 1593 aaKnown RBP31.89■■■□□ 2.69
PCCB-216ENST00000483687 WDR62O43379 1518 aa31.84■■■□□ 2.69
PCCB-216ENST00000483687 FGD5Q6ZNL6 1462 aa31.8■■■□□ 2.68
PCCB-216ENST00000483687 POLA1P09884 1462 aaPredicted RBP31.74■■■□□ 2.67
PCCB-216ENST00000483687 SOGA1O94964 1423 aa31.62■■■□□ 2.65
PCCB-216ENST00000483687 RAD54L2Q9Y4B4 1467 aa31.61■■■□□ 2.65
PCCB-216ENST00000483687 CUX2O14529 1486 aa31.57■■■□□ 2.64
PCCB-216ENST00000483687 TARBP1Q13395 1621 aaKnown RBP31.51■■■□□ 2.64
PCCB-216ENST00000483687 ABCA10Q8WWZ4 1543 aa31.51■■■□□ 2.63
PCCB-216ENST00000483687 IFT140Q96RY7 1462 aa31.49■■■□□ 2.63
PCCB-216ENST00000483687 WDR97A6NE52 1622 aa31.49■■■□□ 2.63
PCCB-216ENST00000483687 RUSC2Q8N2Y8 1516 aa31.45■■■□□ 2.63
PCCB-216ENST00000483687 FAM9AQ8IZU1 332 aaPredicted RBP31.45■■■□□ 2.63
PCCB-216ENST00000483687 KIF27Q86VH2 1401 aa31.43■■■□□ 2.62
PCCB-216ENST00000483687 EEA1Q15075 1411 aa31.41■■■□□ 2.62
PCCB-216ENST00000483687 TDRD9Q8NDG6 1382 aaKnown RBP31.35■■■□□ 2.61
PCCB-216ENST00000483687 ABCA5Q8WWZ7 1642 aa31.32■■■□□ 2.6
PCCB-216ENST00000483687 ZNF608Q9ULD9 1512 aaPredicted RBP31.31■■■□□ 2.6
PCCB-216ENST00000483687 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
PCCB-216ENST00000483687 AQRO60306 1485 aaKnown RBP eCLIP31.26■■■□□ 2.62e-6■■■■□ 22.2
PCCB-216ENST00000483687 CSRNP3Q8WYN3 585 aa31.26■■■□□ 2.59
PCCB-216ENST00000483687 EIF4G3O43432 1585 aaKnown RBP31.23■■■□□ 2.59
PCCB-216ENST00000483687 PBRM1Q86U86 1689 aa31.18■■■□□ 2.58
PCCB-216ENST00000483687 IGF1RP08069 1367 aa31.18■■■□□ 2.58
PCCB-216ENST00000483687 ERICH3Q5RHP9 1530 aa31.15■■■□□ 2.58
PCCB-216ENST00000483687 GRIN2BQ13224 1484 aa31.13■■■□□ 2.57
PCCB-216ENST00000483687 CUL7Q14999 1698 aa31.06■■■□□ 2.56
PCCB-216ENST00000483687 KIF21BO75037 1637 aa31.04■■■□□ 2.56
PCCB-216ENST00000483687 PRXQ9BXM0 1461 aa31.04■■■□□ 2.56
PCCB-216ENST00000483687 CARMIL1Q5VZK9 1371 aa31.03■■■□□ 2.56
PCCB-216ENST00000483687 EHMT2Q96KQ7 1210 aa31.02■■■□□ 2.56
PCCB-216ENST00000483687 LOC105371045A0A1W2PR82 267 aa30.99■■■□□ 2.55
PCCB-216ENST00000483687 SNAPC4Q5SXM2 1469 aa30.99■■■□□ 2.55
PCCB-216ENST00000483687 ADAMTS12P58397 1594 aa30.95■■■□□ 2.55
PCCB-216ENST00000483687 GOLGA3Q08378 1498 aa30.95■■■□□ 2.54
PCCB-216ENST00000483687 MAGI1Q96QZ7 1491 aaPredicted RBP30.95■■■□□ 2.54
PCCB-216ENST00000483687 RAPGEF2Q9Y4G8 1499 aa30.95■■■□□ 2.54
PCCB-216ENST00000483687 FHAD1B1AJZ9 1412 aa30.92■■■□□ 2.54
PCCB-216ENST00000483687 UBTFP17480 764 aaKnown RBP30.82■■■□□ 2.52
PCCB-216ENST00000483687 SYNJ2O15056 1496 aa30.82■■■□□ 2.52
PCCB-216ENST00000483687 CHMP7Q8WUX9 453 aaPredicted RBP30.77■■■□□ 2.52
PCCB-216ENST00000483687 FBLN2P98095 1184 aa30.76■■■□□ 2.51
PCCB-216ENST00000483687 GRIN2AQ12879 1464 aa30.74■■■□□ 2.51
PCCB-216ENST00000483687 TNIKQ9UKE5 1360 aa30.7■■■□□ 2.51
PCCB-216ENST00000483687 CHD1O14646 1710 aa30.69■■■□□ 2.5
PCCB-216ENST00000483687 CTTNBP2Q8WZ74 1663 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms