RNA–Protein interactions for RNA: ENST00000381410.4

SNX18-203, Transcript of sorting nexin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX18, Length 5,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-203ENST00000381410 DCAF8L2P0C7V8 631 aa35.01■■■■□ 3.2
SNX18-203ENST00000381410 NISCHQ9Y2I1 1504 aa34.18■■■■□ 3.06
SNX18-203ENST00000381410 SUPT5HO00267 1087 aaKnown RBP33.36■■■□□ 2.93
SNX18-203ENST00000381410 SHROOM4Q9ULL8 1493 aa32.82■■■□□ 2.84
SNX18-203ENST00000381410 EHMT2Q96KQ7 1210 aa31.99■■■□□ 2.71
SNX18-203ENST00000381410 APLP2Q06481 763 aa31.66■■■□□ 2.66
SNX18-203ENST00000381410 FAM9AQ8IZU1 332 aaPredicted RBP31.39■■■□□ 2.62
SNX18-203ENST00000381410 PELP1Q8IZL8 1130 aaKnown RBP31.3■■■□□ 2.6
SNX18-203ENST00000381410 PCGF6Q9BYE7 350 aa31.07■■■□□ 2.56
SNX18-203ENST00000381410 TRIM41Q8WV44 630 aa31.01■■■□□ 2.56
SNX18-203ENST00000381410 TTBK1Q5TCY1 1321 aaPredicted RBP30.94■■■□□ 2.54
SNX18-203ENST00000381410 ZEB1P37275 1124 aaPredicted RBP30.73■■■□□ 2.51
SNX18-203ENST00000381410 RANGAP1P46060 587 aaPredicted RBP30.69■■■□□ 2.5
SNX18-203ENST00000381410 UBTFP17480 764 aaKnown RBP30.57■■■□□ 2.48
SNX18-203ENST00000381410 CCER1Q8TC90 406 aaPredicted RBP30.55■■■□□ 2.48
SNX18-203ENST00000381410 ATP1B4Q9UN42 357 aaPredicted RBP30.45■■■□□ 2.46
SNX18-203ENST00000381410 CENPBP07199 599 aaPredicted RBP30.42■■■□□ 2.46
SNX18-203ENST00000381410 TRIM26Q12899 539 aaPredicted RBP29.95■■■□□ 2.39
SNX18-203ENST00000381410 PPARGC1BQ86YN6 1023 aaKnown RBP29.88■■■□□ 2.37
SNX18-203ENST00000381410 ERICH6Q7L0X2 663 aa29.83■■■□□ 2.37
SNX18-203ENST00000381410 CHIC1Q5VXU3 224 aa29.8■■■□□ 2.36
SNX18-203ENST00000381410 NEFLP07196 543 aa29.74■■■□□ 2.35
SNX18-203ENST00000381410 YTHDC1Q96MU7 727 aaKnown RBP29.64■■■□□ 2.34
SNX18-203ENST00000381410 LOC105371045A0A1W2PR82 267 aa29.62■■■□□ 2.33
SNX18-203ENST00000381410 HRCP23327 699 aa29.54■■■□□ 2.32
SNX18-203ENST00000381410 ITGAEP38570 1179 aa29.47■■■□□ 2.31
SNX18-203ENST00000381410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.44■■■□□ 2.3
SNX18-203ENST00000381410 HNRNPUL2Q1KMD3 747 aaKnown RBP29.44■■■□□ 2.3
SNX18-203ENST00000381410 ABCC9O60706 1549 aa29.25■■■□□ 2.27
SNX18-203ENST00000381410 MYT1LQ9UL68 1186 aa29.23■■■□□ 2.27
SNX18-203ENST00000381410 POLR3GLQ9BT43 218 aa29.09■■■□□ 2.25
SNX18-203ENST00000381410 PABPN1Q86U42 306 aaKnown RBP eCLIP29.08■■■□□ 2.25
SNX18-203ENST00000381410 MYT1Q01538 1121 aa28.96■■■□□ 2.23
SNX18-203ENST00000381410 FAM50AQ14320 339 aaKnown RBP28.83■■■□□ 2.21
SNX18-203ENST00000381410 DIEXFQ68CQ4 756 aaKnown RBP28.77■■■□□ 2.2
SNX18-203ENST00000381410 DAXXQ9UER7 740 aaPredicted RBP28.74■■■□□ 2.19
SNX18-203ENST00000381410 CNGB1Q14028 1251 aaPredicted RBP28.71■■■□□ 2.19
SNX18-203ENST00000381410 TRIM52Q96A61 297 aa28.63■■■□□ 2.17
SNX18-203ENST00000381410 SLC4A1APQ9BWU0 796 aaKnown RBP28.52■■■□□ 2.16
SNX18-203ENST00000381410 NEUROD1Q13562 356 aa28.49■■■□□ 2.15
SNX18-203ENST00000381410 CSRNP3Q8WYN3 585 aa28.46■■■□□ 2.15
SNX18-203ENST00000381410 FBLN2P98095 1184 aa28.33■■■□□ 2.13
SNX18-203ENST00000381410 ZCCHC6Q5VYS8 1495 aaKnown RBP28.31■■■□□ 2.12
SNX18-203ENST00000381410 ANP32CO43423 234 aa28.27■■■□□ 2.12
SNX18-203ENST00000381410 SCRIBQ14160 1630 aa28.22■■■□□ 2.11
SNX18-203ENST00000381410 ZNF326Q5BKZ1 582 aaKnown RBP28.21■■■□□ 2.11
SNX18-203ENST00000381410 ZNF316A6NFI3 1004 aaPredicted RBP28.21■■■□□ 2.11
SNX18-203ENST00000381410 CLSPNQ9HAW4 1339 aa28.21■■■□□ 2.11
SNX18-203ENST00000381410 P3H3Q8IVL6 736 aa28.17■■■□□ 2.1
SNX18-203ENST00000381410 RTL5Q5HYW3 569 aaPredicted RBP28.06■■■□□ 2.08
SNX18-203ENST00000381410 CDK11AQ9UQ88 783 aaPredicted RBP28.03■■■□□ 2.08
SNX18-203ENST00000381410 GTF3C3Q9Y5Q9 886 aa28.01■■■□□ 2.08
SNX18-203ENST00000381410 ARID3CA6NKF2 412 aa27.98■■■□□ 2.07
SNX18-203ENST00000381410 CCDC180Q9P1Z9 1646 aa27.97■■■□□ 2.07
SNX18-203ENST00000381410 BCANQ96GW7 911 aa27.93■■■□□ 2.06
SNX18-203ENST00000381410 ZNF777Q9ULD5 760 aaPredicted RBP27.89■■■□□ 2.06
SNX18-203ENST00000381410 DCAF1Q9Y4B6 1507 aa27.88■■■□□ 2.05
SNX18-203ENST00000381410 ZBTB47Q9UFB7 747 aaPredicted RBP27.75■■■□□ 2.03
SNX18-203ENST00000381410 TONSLQ96HA7 1378 aa27.72■■■□□ 2.03
SNX18-203ENST00000381410 ACIN1Q9UKV3 1341 aaKnown RBP27.72■■■□□ 2.03
SNX18-203ENST00000381410 NEFMP07197 916 aa27.7■■■□□ 2.03
SNX18-203ENST00000381410 CANXP27824 592 aaKnown RBP27.68■■■□□ 2.02
SNX18-203ENST00000381410 RB1CC1Q8TDY2 1594 aa27.52■■■□□ 2
SNX18-203ENST00000381410 SLC24A1O60721 1099 aa27.46■■□□□ 1.99
SNX18-203ENST00000381410 CLIP1P30622 1438 aa27.46■■□□□ 1.99
SNX18-203ENST00000381410 NPM1P06748 294 aaKnown RBP eCLIP27.46■■□□□ 1.99
SNX18-203ENST00000381410 ESF1Q9H501 851 aaKnown RBP27.46■■□□□ 1.99
SNX18-203ENST00000381410 EEA1Q15075 1411 aa27.43■■□□□ 1.98
SNX18-203ENST00000381410 MTUS2Q5JR59 1369 aa27.43■■□□□ 1.98
SNX18-203ENST00000381410 RSF1Q96T23 1441 aaPredicted RBP27.43■■□□□ 1.98
SNX18-203ENST00000381410 CHIC2Q9UKJ5 165 aa27.42■■□□□ 1.98
SNX18-203ENST00000381410 DDX10Q13206 875 aaKnown RBP27.42■■□□□ 1.98
SNX18-203ENST00000381410 CHGAP10645 457 aaKnown RBP27.39■■□□□ 1.98
SNX18-203ENST00000381410 ANP32AP39687 249 aaKnown RBP27.37■■□□□ 1.97
SNX18-203ENST00000381410 TSPY4P0CV99 314 aa27.36■■□□□ 1.97
SNX18-203ENST00000381410 TSPY10P0CW01 314 aa27.36■■□□□ 1.97
SNX18-203ENST00000381410 HNRNPUQ00839 825 aaKnown RBP eCLIP27.35■■□□□ 1.97
SNX18-203ENST00000381410 STAG3Q9UJ98 1225 aa27.34■■□□□ 1.97
SNX18-203ENST00000381410 BCL11AQ9H165 835 aa27.3■■□□□ 1.96
SNX18-203ENST00000381410 NACADO15069 1562 aa27.3■■□□□ 1.96
SNX18-203ENST00000381410 FKBP8Q14318 412 aa27.3■■□□□ 1.96
SNX18-203ENST00000381410 CHMP7Q8WUX9 453 aaPredicted RBP27.3■■□□□ 1.96
SNX18-203ENST00000381410 GOLGA3Q08378 1498 aa27.29■■□□□ 1.96
SNX18-203ENST00000381410 FAM9BQ8IZU0 186 aa27.27■■□□□ 1.96
SNX18-203ENST00000381410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.26■■□□□ 1.95
SNX18-203ENST00000381410 WRNQ14191 1432 aaPredicted RBP eCLIP27.22■■□□□ 1.95
SNX18-203ENST00000381410 CEP162Q5TB80 1403 aa27.22■■□□□ 1.95
SNX18-203ENST00000381410 TMC1Q8TDI8 760 aa27.2■■□□□ 1.94
SNX18-203ENST00000381410 BAZ1BQ9UIG0 1483 aaKnown RBP27.15■■□□□ 1.94
SNX18-203ENST00000381410 NPM2Q86SE8 214 aaKnown RBP27.13■■□□□ 1.93
SNX18-203ENST00000381410 MYO15BQ96JP2 1530 aa27.13■■□□□ 1.93
SNX18-203ENST00000381410 KDM2AQ9Y2K7 1162 aa27.11■■□□□ 1.93
SNX18-203ENST00000381410 MRS2Q9HD23 443 aa27.09■■□□□ 1.93
SNX18-203ENST00000381410 KIF27Q86VH2 1401 aa27.08■■□□□ 1.93
SNX18-203ENST00000381410 TNIKQ9UKE5 1360 aa27.07■■□□□ 1.92
SNX18-203ENST00000381410 EIF4G2P78344 907 aaKnown RBP eCLIP27.06■■□□□ 1.92
SNX18-203ENST00000381410 RRP7BPQ9NSQ0 103 aa27.05■■□□□ 1.92
SNX18-203ENST00000381410 SALL2Q9Y467 1007 aaPredicted RBP27.05■■□□□ 1.92
SNX18-203ENST00000381410 WDR43Q15061 677 aaKnown RBP eCLIP27.04■■□□□ 1.92
SNX18-203ENST00000381410 CEP164Q9UPV0 1460 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms