RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 DCAF8L2P0C7V8 631 aa35.07■■■■□ 3.21
SMURF1-202ENST00000361368 SUPT5HO00267 1087 aaKnown RBP32.92■■■□□ 2.86
SMURF1-202ENST00000361368 PELP1Q8IZL8 1130 aaKnown RBP32.31■■■□□ 2.76
SMURF1-202ENST00000361368 NISCHQ9Y2I1 1504 aa32.19■■■□□ 2.74
SMURF1-202ENST00000361368 APLP2Q06481 763 aa32.11■■■□□ 2.73
SMURF1-202ENST00000361368 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
SMURF1-202ENST00000361368 FAM9AQ8IZU1 332 aaPredicted RBP32.06■■■□□ 2.72
SMURF1-202ENST00000361368 EHMT2Q96KQ7 1210 aa31.99■■■□□ 2.71
SMURF1-202ENST00000361368 TTBK1Q5TCY1 1321 aaPredicted RBP30.94■■■□□ 2.54
SMURF1-202ENST00000361368 CCER1Q8TC90 406 aaPredicted RBP30.89■■■□□ 2.54
SMURF1-202ENST00000361368 ERICH6Q7L0X2 663 aa30.82■■■□□ 2.52
SMURF1-202ENST00000361368 ATP1B4Q9UN42 357 aaPredicted RBP30.8■■■□□ 2.52
SMURF1-202ENST00000361368 RANGAP1P46060 587 aaPredicted RBP30.78■■■□□ 2.52
SMURF1-202ENST00000361368 PCGF6Q9BYE7 350 aa30.74■■■□□ 2.51
SMURF1-202ENST00000361368 CENPBP07199 599 aaPredicted RBP30.69■■■□□ 2.5
SMURF1-202ENST00000361368 ZEB1P37275 1124 aaPredicted RBP30.64■■■□□ 2.5
SMURF1-202ENST00000361368 TRIM41Q8WV44 630 aa30.62■■■□□ 2.49
SMURF1-202ENST00000361368 UBTFP17480 764 aaKnown RBP30.47■■■□□ 2.47
SMURF1-202ENST00000361368 NEFLP07196 543 aa30.31■■■□□ 2.44
SMURF1-202ENST00000361368 MYT1LQ9UL68 1186 aa29.97■■■□□ 2.39
SMURF1-202ENST00000361368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.8■■■□□ 2.36
SMURF1-202ENST00000361368 HNRNPUL2Q1KMD3 747 aaKnown RBP29.8■■■□□ 2.36
SMURF1-202ENST00000361368 YTHDC1Q96MU7 727 aaKnown RBP29.74■■■□□ 2.35
SMURF1-202ENST00000361368 DAXXQ9UER7 740 aaPredicted RBP29.66■■■□□ 2.34
SMURF1-202ENST00000361368 POLR3GLQ9BT43 218 aa29.54■■■□□ 2.32
SMURF1-202ENST00000361368 MYT1Q01538 1121 aa29.48■■■□□ 2.31
SMURF1-202ENST00000361368 ITGAEP38570 1179 aa29.46■■■□□ 2.31
SMURF1-202ENST00000361368 PPARGC1BQ86YN6 1023 aaKnown RBP29.44■■■□□ 2.3
SMURF1-202ENST00000361368 TRIM26Q12899 539 aaPredicted RBP29.39■■■□□ 2.3
SMURF1-202ENST00000361368 SLC4A1APQ9BWU0 796 aaKnown RBP29.23■■■□□ 2.27
SMURF1-202ENST00000361368 CHIC1Q5VXU3 224 aa29.2■■■□□ 2.26
SMURF1-202ENST00000361368 CNGB1Q14028 1251 aaPredicted RBP29.03■■■□□ 2.24
SMURF1-202ENST00000361368 CLSPNQ9HAW4 1339 aa28.92■■■□□ 2.22
SMURF1-202ENST00000361368 HRCP23327 699 aa28.91■■■□□ 2.22
SMURF1-202ENST00000361368 ZNF316A6NFI3 1004 aaPredicted RBP28.87■■■□□ 2.21
SMURF1-202ENST00000361368 FAM50AQ14320 339 aaKnown RBP28.77■■■□□ 2.2
SMURF1-202ENST00000361368 TRIM52Q96A61 297 aa28.76■■■□□ 2.2
SMURF1-202ENST00000361368 RTL5Q5HYW3 569 aaPredicted RBP28.71■■■□□ 2.19
SMURF1-202ENST00000361368 LOC105371045A0A1W2PR82 267 aa28.69■■■□□ 2.18
SMURF1-202ENST00000361368 ZBTB47Q9UFB7 747 aaPredicted RBP28.62■■■□□ 2.17
SMURF1-202ENST00000361368 DIEXFQ68CQ4 756 aaKnown RBP28.42■■■□□ 2.14
SMURF1-202ENST00000361368 FBLN2P98095 1184 aa28.41■■■□□ 2.14
SMURF1-202ENST00000361368 NEUROD1Q13562 356 aa28.41■■■□□ 2.14
SMURF1-202ENST00000361368 PABPN1Q86U42 306 aaKnown RBP eCLIP28.4■■■□□ 2.142e-6■■■■□ 23
SMURF1-202ENST00000361368 NEFMP07197 916 aa28.39■■■□□ 2.14
SMURF1-202ENST00000361368 ZNF326Q5BKZ1 582 aaKnown RBP28.38■■■□□ 2.13
SMURF1-202ENST00000361368 BCANQ96GW7 911 aa28.33■■■□□ 2.13
SMURF1-202ENST00000361368 ANP32CO43423 234 aa28.32■■■□□ 2.12
SMURF1-202ENST00000361368 SLC24A1O60721 1099 aa28.3■■■□□ 2.12
SMURF1-202ENST00000361368 ABCC9O60706 1549 aa28.25■■■□□ 2.11
SMURF1-202ENST00000361368 CANXP27824 592 aaKnown RBP28.24■■■□□ 2.11
SMURF1-202ENST00000361368 ESF1Q9H501 851 aaKnown RBP28.1■■■□□ 2.09
SMURF1-202ENST00000361368 CDK11AQ9UQ88 783 aaPredicted RBP28.09■■■□□ 2.09
SMURF1-202ENST00000361368 BCL11AQ9H165 835 aa27.94■■■□□ 2.06
SMURF1-202ENST00000361368 ZNF777Q9ULD5 760 aaPredicted RBP27.91■■■□□ 2.06
SMURF1-202ENST00000361368 ARID3CA6NKF2 412 aa27.84■■■□□ 2.05
SMURF1-202ENST00000361368 P3H3Q8IVL6 736 aa27.84■■■□□ 2.05
SMURF1-202ENST00000361368 STAG3Q9UJ98 1225 aa27.84■■■□□ 2.05
SMURF1-202ENST00000361368 NPM1P06748 294 aaKnown RBP eCLIP27.8■■■□□ 2.04
SMURF1-202ENST00000361368 CSRNP3Q8WYN3 585 aa27.72■■■□□ 2.03
SMURF1-202ENST00000361368 ANP32AP39687 249 aaKnown RBP27.7■■■□□ 2.02
SMURF1-202ENST00000361368 CHGAP10645 457 aaKnown RBP27.69■■■□□ 2.02
SMURF1-202ENST00000361368 GTF3C3Q9Y5Q9 886 aa27.62■■■□□ 2.01
SMURF1-202ENST00000361368 ANP32BQ92688 251 aaKnown RBP27.58■■■□□ 2.01
SMURF1-202ENST00000361368 HSP90AA1P07900 732 aaKnown RBP27.53■■■□□ 2
SMURF1-202ENST00000361368 TONSLQ96HA7 1378 aa27.53■■■□□ 2
SMURF1-202ENST00000361368 UPF2Q9HAU5 1272 aaKnown RBP27.52■■■□□ 2
SMURF1-202ENST00000361368 PLPPR3Q6T4P5 718 aa27.5■■□□□ 1.99
SMURF1-202ENST00000361368 NPM2Q86SE8 214 aaKnown RBP27.41■■□□□ 1.98
SMURF1-202ENST00000361368 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.34■■□□□ 1.97
SMURF1-202ENST00000361368 TSPY4P0CV99 314 aa27.3■■□□□ 1.96
SMURF1-202ENST00000361368 TSPY10P0CW01 314 aa27.3■■□□□ 1.96
SMURF1-202ENST00000361368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.29■■□□□ 1.96
SMURF1-202ENST00000361368 WDR43Q15061 677 aaKnown RBP eCLIP27.25■■□□□ 1.95
SMURF1-202ENST00000361368 HNRNPUQ00839 825 aaKnown RBP eCLIP27.22■■□□□ 1.95
SMURF1-202ENST00000361368 TMC1Q8TDI8 760 aa27.21■■□□□ 1.95
SMURF1-202ENST00000361368 SCAF1Q9H7N4 1312 aaKnown RBP27.21■■□□□ 1.95
SMURF1-202ENST00000361368 FAM9BQ8IZU0 186 aa27.19■■□□□ 1.94
SMURF1-202ENST00000361368 ACIN1Q9UKV3 1341 aaKnown RBP27.17■■□□□ 1.94
SMURF1-202ENST00000361368 MYH16Q9H6N6 1097 aa27.13■■□□□ 1.93
SMURF1-202ENST00000361368 CHIC2Q9UKJ5 165 aa27.13■■□□□ 1.93
SMURF1-202ENST00000361368 SCRIBQ14160 1630 aa27.13■■□□□ 1.93
SMURF1-202ENST00000361368 FKBP8Q14318 412 aa27.13■■□□□ 1.93
SMURF1-202ENST00000361368 CHMP7Q8WUX9 453 aaPredicted RBP27.11■■□□□ 1.93
SMURF1-202ENST00000361368 CDK11BP21127 795 aaKnown RBP27.09■■□□□ 1.93
SMURF1-202ENST00000361368 A0A0G2JS52 829 aa27.08■■□□□ 1.93
SMURF1-202ENST00000361368 SALL2Q9Y467 1007 aaPredicted RBP27.08■■□□□ 1.93
SMURF1-202ENST00000361368 DDX10Q13206 875 aaKnown RBP27.07■■□□□ 1.92
SMURF1-202ENST00000361368 MTUS2Q5JR59 1369 aa27.05■■□□□ 1.92
SMURF1-202ENST00000361368 PPP1R15AO75807 674 aaPredicted RBP27.05■■□□□ 1.92
SMURF1-202ENST00000361368 CCDC136Q96JN2 1154 aa27.04■■□□□ 1.92
SMURF1-202ENST00000361368 KDM2AQ9Y2K7 1162 aa27.03■■□□□ 1.92
SMURF1-202ENST00000361368 C14orf37Q86TY3 774 aa26.96■■□□□ 1.91
SMURF1-202ENST00000361368 MRS2Q9HD23 443 aa26.95■■□□□ 1.9
SMURF1-202ENST00000361368 ZBTB7CA1YPR0 619 aa26.94■■□□□ 1.9
SMURF1-202ENST00000361368 EIF5BO60841 1220 aaKnown RBP26.87■■□□□ 1.89
SMURF1-202ENST00000361368 HAP1P54257 671 aaPredicted RBP26.87■■□□□ 1.89
SMURF1-202ENST00000361368 PLEKHD1A6NEE1 506 aa26.84■■□□□ 1.89
SMURF1-202ENST00000361368 EIF4G2P78344 907 aaKnown RBP eCLIP26.81■■□□□ 1.88
SMURF1-202ENST00000361368 CFAP53Q96M91 514 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms