RNA–Protein interactions for RNA: ENST00000370129.4

ABCD1-202, Transcript of ATP binding cassette subfamily D member 1, humanhuman

TSL 2 BASIC

Gene ABCD1, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1-202ENST00000370129 NISCHQ9Y2I1 1504 aa46.12■■■■■ 4.97
ABCD1-202ENST00000370129 CCDC180Q9P1Z9 1646 aa41.18■■■■■ 4.18
ABCD1-202ENST00000370129 ABCC9O60706 1549 aa40.93■■■■■ 4.14
ABCD1-202ENST00000370129 RB1CC1Q8TDY2 1594 aa39.05■■■■□ 3.84
ABCD1-202ENST00000370129 NACADO15069 1562 aa38.89■■■■□ 3.82
ABCD1-202ENST00000370129 DCAF8L2P0C7V8 631 aa38.76■■■■□ 3.8
ABCD1-202ENST00000370129 MYO15BQ96JP2 1530 aa38.48■■■■□ 3.75
ABCD1-202ENST00000370129 ZCCHC6Q5VYS8 1495 aaKnown RBP38.29■■■■□ 3.72
ABCD1-202ENST00000370129 PABPN1Q86U42 306 aaKnown RBP eCLIP38.18■■■■□ 3.7
ABCD1-202ENST00000370129 UNC13AQ9UPW8 1703 aa38.18■■■■□ 3.7
ABCD1-202ENST00000370129 DNAJC5BQ9UF47 199 aa38.17■■■■□ 3.7
ABCD1-202ENST00000370129 DCAF1Q9Y4B6 1507 aa38.11■■■■□ 3.69
ABCD1-202ENST00000370129 BICRAQ9NZM4 1560 aa37.97■■■■□ 3.67
ABCD1-202ENST00000370129 SCRIBQ14160 1630 aa37.58■■■■□ 3.61
ABCD1-202ENST00000370129 SHROOM4Q9ULL8 1493 aa37.42■■■■□ 3.58
ABCD1-202ENST00000370129 CC2D2AQ9P2K1 1620 aa36.97■■■■□ 3.51
ABCD1-202ENST00000370129 EIF4G1Q04637 1599 aaKnown RBP36.97■■■■□ 3.51
ABCD1-202ENST00000370129 CECR2Q9BXF3 1484 aa36.82■■■■□ 3.48
ABCD1-202ENST00000370129 NCAPD3P42695 1498 aa35.92■■■■□ 3.34
ABCD1-202ENST00000370129 SMARCA4P51532 1647 aa35.89■■■■□ 3.34
ABCD1-202ENST00000370129 ATAD2BQ9ULI0 1458 aa35.87■■■■□ 3.33
ABCD1-202ENST00000370129 SMARCA2P51531 1590 aa35.74■■■■□ 3.31
ABCD1-202ENST00000370129 BAZ1AQ9NRL2 1556 aaPredicted RBP35.74■■■■□ 3.31
ABCD1-202ENST00000370129 HMGXB3Q12766 1538 aa35.66■■■■□ 3.3
ABCD1-202ENST00000370129 MROH2BQ7Z745 1585 aa35.56■■■■□ 3.28
ABCD1-202ENST00000370129 PEG3Q9GZU2 1588 aa35.55■■■■□ 3.28
ABCD1-202ENST00000370129 BAZ1BQ9UIG0 1483 aaKnown RBP35.5■■■■□ 3.27
ABCD1-202ENST00000370129 NESP48681 1621 aa35.27■■■■□ 3.24
ABCD1-202ENST00000370129 ERCC6Q03468 1493 aa35.27■■■■□ 3.24
ABCD1-202ENST00000370129 WIZO95785 1651 aa35.12■■■■□ 3.21
ABCD1-202ENST00000370129 CUX2O14529 1486 aa35.11■■■■□ 3.21
ABCD1-202ENST00000370129 LAMC3Q9Y6N6 1575 aa35.03■■■■□ 3.2
ABCD1-202ENST00000370129 RSF1Q96T23 1441 aaPredicted RBP34.95■■■■□ 3.19
ABCD1-202ENST00000370129 CADPSQ9ULU8 1353 aa34.85■■■■□ 3.17
ABCD1-202ENST00000370129 PDS5BQ9NTI5 1447 aa34.82■■■■□ 3.17
ABCD1-202ENST00000370129 THOC2Q8NI27 1593 aaKnown RBP34.82■■■■□ 3.16
ABCD1-202ENST00000370129 KIF21AQ7Z4S6 1674 aa34.77■■■■□ 3.16
ABCD1-202ENST00000370129 DNAJC5Q9H3Z4 198 aa34.75■■■■□ 3.15
ABCD1-202ENST00000370129 TOP2AP11388 1531 aaKnown RBP34.7■■■■□ 3.14
ABCD1-202ENST00000370129 CFTRP13569 1480 aa34.52■■■■□ 3.12
ABCD1-202ENST00000370129 MRC2Q9UBG0 1479 aa34.51■■■■□ 3.11
ABCD1-202ENST00000370129 FANCD2Q9BXW9 1451 aa34.44■■■■□ 3.1
ABCD1-202ENST00000370129 CEP164Q9UPV0 1460 aa34.43■■■■□ 3.1
ABCD1-202ENST00000370129 WDR62O43379 1518 aa34.42■■■■□ 3.1
ABCD1-202ENST00000370129 CCDC88BA6NC98 1476 aa34.33■■■■□ 3.09
ABCD1-202ENST00000370129 URB2Q14146 1524 aaKnown RBP34.15■■■■□ 3.06
ABCD1-202ENST00000370129 PRDM2Q13029 1718 aa34.12■■■■□ 3.05
ABCD1-202ENST00000370129 TOPBP1Q92547 1522 aa33.84■■■■□ 3.01
ABCD1-202ENST00000370129 ABCC8Q09428 1581 aa33.74■■■□□ 2.99
ABCD1-202ENST00000370129 IFT140Q96RY7 1462 aa33.74■■■□□ 2.99
ABCD1-202ENST00000370129 DNMBPQ6XZF7 1577 aa33.72■■■□□ 2.99
ABCD1-202ENST00000370129 ZNF608Q9ULD9 1512 aaPredicted RBP33.69■■■□□ 2.98
ABCD1-202ENST00000370129 SUPT5HO00267 1087 aaKnown RBP33.62■■■□□ 2.97
ABCD1-202ENST00000370129 OSCARQ8IYS5 282 aa33.57■■■□□ 2.96
ABCD1-202ENST00000370129 POLA1P09884 1462 aaPredicted RBP33.51■■■□□ 2.96
ABCD1-202ENST00000370129 TARBP1Q13395 1621 aaKnown RBP33.5■■■□□ 2.95
ABCD1-202ENST00000370129 EIF4G3O43432 1585 aaKnown RBP33.47■■■□□ 2.95
ABCD1-202ENST00000370129 AQRO60306 1485 aaKnown RBP eCLIP33.42■■■□□ 2.947e-7■■■■■ 35.6
ABCD1-202ENST00000370129 RAD54L2Q9Y4B4 1467 aa33.4■■■□□ 2.94
ABCD1-202ENST00000370129 CUX1P39880 1505 aa33.38■■■□□ 2.93
ABCD1-202ENST00000370129 SOGA1O94964 1423 aa33.36■■■□□ 2.93
ABCD1-202ENST00000370129 FGD5Q6ZNL6 1462 aa33.34■■■□□ 2.93
ABCD1-202ENST00000370129 TRIM41Q8WV44 630 aa33.34■■■□□ 2.93
ABCD1-202ENST00000370129 TDRD9Q8NDG6 1382 aaKnown RBP33.26■■■□□ 2.92
ABCD1-202ENST00000370129 CHD1O14646 1710 aa33.14■■■□□ 2.9
ABCD1-202ENST00000370129 WDR97A6NE52 1622 aa33.14■■■□□ 2.9
ABCD1-202ENST00000370129 RIMBP3CA6NJZ7 1639 aa33.1■■■□□ 2.89
ABCD1-202ENST00000370129 RIMBP3BA6NNM3 1639 aa33.1■■■□□ 2.89
ABCD1-202ENST00000370129 RIMBP3Q9UFD9 1639 aa33.1■■■□□ 2.89
ABCD1-202ENST00000370129 FBLN2P98095 1184 aa33.09■■■□□ 2.89
ABCD1-202ENST00000370129 SNAPC4Q5SXM2 1469 aa33.07■■■□□ 2.88
ABCD1-202ENST00000370129 ARHGEF11O15085 1522 aa33.03■■■□□ 2.88
ABCD1-202ENST00000370129 GRIN2BQ13224 1484 aa33.02■■■□□ 2.88
ABCD1-202ENST00000370129 ABCA10Q8WWZ4 1543 aa32.99■■■□□ 2.87
ABCD1-202ENST00000370129 MAGI1Q96QZ7 1491 aaPredicted RBP32.98■■■□□ 2.87
ABCD1-202ENST00000370129 GAPVD1Q14C86 1478 aa32.96■■■□□ 2.87
ABCD1-202ENST00000370129 WRNQ14191 1432 aaPredicted RBP eCLIP32.94■■■□□ 2.86
ABCD1-202ENST00000370129 CHMP7Q8WUX9 453 aaPredicted RBP32.91■■■□□ 2.86
ABCD1-202ENST00000370129 TOP2BQ02880 1626 aa32.91■■■□□ 2.86
ABCD1-202ENST00000370129 ABCA5Q8WWZ7 1642 aa32.9■■■□□ 2.86
ABCD1-202ENST00000370129 BIVM-ERCC5R4GMW8 1640 aa32.9■■■□□ 2.86
ABCD1-202ENST00000370129 SYNJ1O43426 1573 aa32.89■■■□□ 2.86
ABCD1-202ENST00000370129 PBRM1Q86U86 1689 aa32.88■■■□□ 2.85
ABCD1-202ENST00000370129 SYNJ2O15056 1496 aa32.86■■■□□ 2.85
ABCD1-202ENST00000370129 CLASP1Q7Z460 1538 aa32.82■■■□□ 2.84
ABCD1-202ENST00000370129 CYB5RLQ6IPT4 315 aa32.78■■■□□ 2.84
ABCD1-202ENST00000370129 ARAP1Q96P48 1450 aa32.75■■■□□ 2.83
ABCD1-202ENST00000370129 ADAMTS12P58397 1594 aa32.62■■■□□ 2.81
ABCD1-202ENST00000370129 GRIN2AQ12879 1464 aa32.61■■■□□ 2.81
ABCD1-202ENST00000370129 ERICH3Q5RHP9 1530 aa32.56■■■□□ 2.8
ABCD1-202ENST00000370129 FHAD1B1AJZ9 1412 aa32.55■■■□□ 2.8
ABCD1-202ENST00000370129 NUP160Q12769 1436 aa32.51■■■□□ 2.79
ABCD1-202ENST00000370129 CEP170Q5SW79 1584 aa32.48■■■□□ 2.79
ABCD1-202ENST00000370129 ERCC6L2Q5T890 1561 aa32.36■■■□□ 2.77
ABCD1-202ENST00000370129 SHROOM2Q13796 1616 aa32.29■■■□□ 2.76
ABCD1-202ENST00000370129 IGF1RP08069 1367 aa32.28■■■□□ 2.76
ABCD1-202ENST00000370129 KIF27Q86VH2 1401 aa32.27■■■□□ 2.76
ABCD1-202ENST00000370129 TRHP20396 242 aaPredicted RBP32.27■■■□□ 2.76
ABCD1-202ENST00000370129 JPH4Q96JJ6 628 aa32.17■■■□□ 2.74
ABCD1-202ENST00000370129 RUSC2Q8N2Y8 1516 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms