RNA–Protein interactions for RNA: ENST00000368385.8

TRIM46-204, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 1,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-204ENST00000368385 NISCHQ9Y2I1 1504 aa43.33■■■■■ 4.53
TRIM46-204ENST00000368385 CCDC180Q9P1Z9 1646 aa38.45■■■■□ 3.75
TRIM46-204ENST00000368385 ABCC9O60706 1549 aa37.08■■■■□ 3.53
TRIM46-204ENST00000368385 ZCCHC6Q5VYS8 1495 aaKnown RBP36.19■■■■□ 3.38
TRIM46-204ENST00000368385 NACADO15069 1562 aa36■■■■□ 3.35
TRIM46-204ENST00000368385 RB1CC1Q8TDY2 1594 aa35.95■■■■□ 3.34
TRIM46-204ENST00000368385 MYO15BQ96JP2 1530 aa35.93■■■■□ 3.34
TRIM46-204ENST00000368385 DCAF1Q9Y4B6 1507 aa35.92■■■■□ 3.34
TRIM46-204ENST00000368385 DCAF8L2P0C7V8 631 aa35.92■■■■□ 3.34
TRIM46-204ENST00000368385 SHROOM4Q9ULL8 1493 aa35.37■■■■□ 3.25
TRIM46-204ENST00000368385 UNC13AQ9UPW8 1703 aa35.2■■■■□ 3.23
TRIM46-204ENST00000368385 SCRIBQ14160 1630 aa35.02■■■■□ 3.2
TRIM46-204ENST00000368385 SUPT5HO00267 1087 aaKnown RBP34.88■■■■□ 3.17
TRIM46-204ENST00000368385 BICRAQ9NZM4 1560 aa34.81■■■■□ 3.16
TRIM46-204ENST00000368385 PABPN1Q86U42 306 aaKnown RBP eCLIP34.66■■■■□ 3.14
TRIM46-204ENST00000368385 CHIC1Q5VXU3 224 aa34.37■■■■□ 3.09
TRIM46-204ENST00000368385 HRCP23327 699 aa33.97■■■■□ 3.03
TRIM46-204ENST00000368385 EIF4G1Q04637 1599 aaKnown RBP33.87■■■■□ 3.01
TRIM46-204ENST00000368385 CECR2Q9BXF3 1484 aa33.66■■■□□ 2.98
TRIM46-204ENST00000368385 CC2D2AQ9P2K1 1620 aa33.63■■■□□ 2.97
TRIM46-204ENST00000368385 DNAJC5BQ9UF47 199 aa33.59■■■□□ 2.97
TRIM46-204ENST00000368385 BAZ1AQ9NRL2 1556 aaPredicted RBP33.59■■■□□ 2.97
TRIM46-204ENST00000368385 SMARCA4P51532 1647 aa33.57■■■□□ 2.96
TRIM46-204ENST00000368385 PCGF6Q9BYE7 350 aa33.44■■■□□ 2.94
TRIM46-204ENST00000368385 MROH2BQ7Z745 1585 aa33.38■■■□□ 2.93
TRIM46-204ENST00000368385 SMARCA2P51531 1590 aa33.27■■■□□ 2.92
TRIM46-204ENST00000368385 PEG3Q9GZU2 1588 aa33.25■■■□□ 2.91
TRIM46-204ENST00000368385 ATAD2BQ9ULI0 1458 aa33.23■■■□□ 2.91
TRIM46-204ENST00000368385 RSF1Q96T23 1441 aaPredicted RBP33.19■■■□□ 2.9
TRIM46-204ENST00000368385 NCAPD3P42695 1498 aa33.17■■■□□ 2.9
TRIM46-204ENST00000368385 LOC105371045A0A1W2PR82 267 aa33.1■■■□□ 2.89
TRIM46-204ENST00000368385 HMGXB3Q12766 1538 aa33.09■■■□□ 2.89
TRIM46-204ENST00000368385 WIZO95785 1651 aa33.08■■■□□ 2.89
TRIM46-204ENST00000368385 TRIM26Q12899 539 aaPredicted RBP33.02■■■□□ 2.88
TRIM46-204ENST00000368385 BAZ1BQ9UIG0 1483 aaKnown RBP33■■■□□ 2.87
TRIM46-204ENST00000368385 PPARGC1BQ86YN6 1023 aaKnown RBP32.82■■■□□ 2.84
TRIM46-204ENST00000368385 TOP2AP11388 1531 aaKnown RBP32.76■■■□□ 2.83
TRIM46-204ENST00000368385 TRIM41Q8WV44 630 aa32.67■■■□□ 2.82
TRIM46-204ENST00000368385 ZEB1P37275 1124 aaPredicted RBP32.63■■■□□ 2.81
TRIM46-204ENST00000368385 CCDC88BA6NC98 1476 aa32.32■■■□□ 2.76
TRIM46-204ENST00000368385 LAMC3Q9Y6N6 1575 aa32.29■■■□□ 2.76
TRIM46-204ENST00000368385 NESP48681 1621 aa32.21■■■□□ 2.75
TRIM46-204ENST00000368385 CADPSQ9ULU8 1353 aa32.2■■■□□ 2.75
TRIM46-204ENST00000368385 CFTRP13569 1480 aa32.12■■■□□ 2.73
TRIM46-204ENST00000368385 FAM9AQ8IZU1 332 aaPredicted RBP32.11■■■□□ 2.73
TRIM46-204ENST00000368385 PRDM2Q13029 1718 aa32.07■■■□□ 2.72
TRIM46-204ENST00000368385 PDS5BQ9NTI5 1447 aa32■■■□□ 2.71
TRIM46-204ENST00000368385 ERCC6Q03468 1493 aa31.96■■■□□ 2.71
TRIM46-204ENST00000368385 KIF21AQ7Z4S6 1674 aa31.94■■■□□ 2.7
TRIM46-204ENST00000368385 FANCD2Q9BXW9 1451 aa31.85■■■□□ 2.69
TRIM46-204ENST00000368385 WRNQ14191 1432 aaPredicted RBP eCLIP31.8■■■□□ 2.68
TRIM46-204ENST00000368385 CEP164Q9UPV0 1460 aa31.79■■■□□ 2.68
TRIM46-204ENST00000368385 THOC2Q8NI27 1593 aaKnown RBP31.72■■■□□ 2.67
TRIM46-204ENST00000368385 MRC2Q9UBG0 1479 aa31.66■■■□□ 2.66
TRIM46-204ENST00000368385 EEA1Q15075 1411 aa31.66■■■□□ 2.66
TRIM46-204ENST00000368385 ABCC8Q09428 1581 aa31.58■■■□□ 2.65
TRIM46-204ENST00000368385 EHMT2Q96KQ7 1210 aa31.57■■■□□ 2.64
TRIM46-204ENST00000368385 WDR62O43379 1518 aa31.56■■■□□ 2.64
TRIM46-204ENST00000368385 PELP1Q8IZL8 1130 aaKnown RBP31.55■■■□□ 2.64
TRIM46-204ENST00000368385 TNIKQ9UKE5 1360 aa31.55■■■□□ 2.64
TRIM46-204ENST00000368385 CUX2O14529 1486 aa31.52■■■□□ 2.64
TRIM46-204ENST00000368385 CEP162Q5TB80 1403 aa31.49■■■□□ 2.63
TRIM46-204ENST00000368385 URB2Q14146 1524 aaKnown RBP31.49■■■□□ 2.63
TRIM46-204ENST00000368385 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
TRIM46-204ENST00000368385 TOPBP1Q92547 1522 aa31.39■■■□□ 2.62
TRIM46-204ENST00000368385 CCER1Q8TC90 406 aaPredicted RBP31.38■■■□□ 2.61
TRIM46-204ENST00000368385 SOGA1O94964 1423 aa31.36■■■□□ 2.61
TRIM46-204ENST00000368385 SCAF1Q9H7N4 1312 aaKnown RBP31.36■■■□□ 2.61
TRIM46-204ENST00000368385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.33■■■□□ 2.61
TRIM46-204ENST00000368385 CUX1P39880 1505 aa31.3■■■□□ 2.6
TRIM46-204ENST00000368385 GOLGA3Q08378 1498 aa31.29■■■□□ 2.6
TRIM46-204ENST00000368385 CSRNP3Q8WYN3 585 aa31.27■■■□□ 2.6
TRIM46-204ENST00000368385 BIVM-ERCC5R4GMW8 1640 aa31.21■■■□□ 2.59
TRIM46-204ENST00000368385 TOP2BQ02880 1626 aa31.18■■■□□ 2.58
TRIM46-204ENST00000368385 KIF21BO75037 1637 aa31.17■■■□□ 2.58
TRIM46-204ENST00000368385 SYNJ1O43426 1573 aa31.16■■■□□ 2.58
TRIM46-204ENST00000368385 POLA1P09884 1462 aaPredicted RBP31.15■■■□□ 2.58
TRIM46-204ENST00000368385 RUSC2Q8N2Y8 1516 aa31.14■■■□□ 2.58
TRIM46-204ENST00000368385 FGD5Q6ZNL6 1462 aa31.13■■■□□ 2.57
TRIM46-204ENST00000368385 IFT140Q96RY7 1462 aa31.1■■■□□ 2.57
TRIM46-204ENST00000368385 ACIN1Q9UKV3 1341 aaKnown RBP31.09■■■□□ 2.57
TRIM46-204ENST00000368385 TARBP1Q13395 1621 aaKnown RBP31.05■■■□□ 2.56
TRIM46-204ENST00000368385 DIEXFQ68CQ4 756 aaKnown RBP31.03■■■□□ 2.56
TRIM46-204ENST00000368385 UBTFP17480 764 aaKnown RBP30.99■■■□□ 2.55
TRIM46-204ENST00000368385 RAD54L2Q9Y4B4 1467 aa30.97■■■□□ 2.55
TRIM46-204ENST00000368385 WDR97A6NE52 1622 aa30.94■■■□□ 2.54
TRIM46-204ENST00000368385 CENPBP07199 599 aaPredicted RBP30.91■■■□□ 2.54
TRIM46-204ENST00000368385 ZNF608Q9ULD9 1512 aaPredicted RBP30.88■■■□□ 2.53
TRIM46-204ENST00000368385 ABCA10Q8WWZ4 1543 aa30.87■■■□□ 2.53
TRIM46-204ENST00000368385 NEUROD1Q13562 356 aa30.86■■■□□ 2.53
TRIM46-204ENST00000368385 EIF4G3O43432 1585 aaKnown RBP30.85■■■□□ 2.53
TRIM46-204ENST00000368385 VPS8Q8N3P4 1428 aa30.84■■■□□ 2.53
TRIM46-204ENST00000368385 CLIP1P30622 1438 aa30.83■■■□□ 2.53
TRIM46-204ENST00000368385 ZNF316A6NFI3 1004 aaPredicted RBP30.8■■■□□ 2.52
TRIM46-204ENST00000368385 AQRO60306 1485 aaKnown RBP eCLIP30.75■■■□□ 2.51
TRIM46-204ENST00000368385 ABCA5Q8WWZ7 1642 aa30.74■■■□□ 2.51
TRIM46-204ENST00000368385 TDRD9Q8NDG6 1382 aaKnown RBP30.74■■■□□ 2.51
TRIM46-204ENST00000368385 TTBK1Q5TCY1 1321 aaPredicted RBP30.72■■■□□ 2.51
TRIM46-204ENST00000368385 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
TRIM46-204ENST00000368385 GAPVD1Q14C86 1478 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms