RNA–Protein interactions for RNA: ENST00000502330.5

SPOCK3-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPOCK3, Length 2,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-204ENST00000502330 NISCHQ9Y2I1 1504 aa42.11■■■■■ 4.33
SPOCK3-204ENST00000502330 CCDC180Q9P1Z9 1646 aa35.95■■■■□ 3.35
SPOCK3-204ENST00000502330 ZCCHC6Q5VYS8 1495 aaKnown RBP35.63■■■■□ 3.29
SPOCK3-204ENST00000502330 SHROOM4Q9ULL8 1493 aa35.39■■■■□ 3.26
SPOCK3-204ENST00000502330 DCAF1Q9Y4B6 1507 aa34.78■■■■□ 3.16
SPOCK3-204ENST00000502330 SUPT5HO00267 1087 aaKnown RBP34.74■■■■□ 3.15
SPOCK3-204ENST00000502330 DCAF8L2P0C7V8 631 aa34.47■■■■□ 3.11
SPOCK3-204ENST00000502330 CHIC1Q5VXU3 224 aa33.97■■■■□ 3.03
SPOCK3-204ENST00000502330 MYO15BQ96JP2 1530 aa33.86■■■■□ 3.01
SPOCK3-204ENST00000502330 ABCC9O60706 1549 aa33.57■■■□□ 2.96
SPOCK3-204ENST00000502330 SCRIBQ14160 1630 aa33.36■■■□□ 2.93
SPOCK3-204ENST00000502330 NACADO15069 1562 aa33.25■■■□□ 2.91
SPOCK3-204ENST00000502330 RSF1Q96T23 1441 aaPredicted RBP33.24■■■□□ 2.91
SPOCK3-204ENST00000502330 RB1CC1Q8TDY2 1594 aa32.93■■■□□ 2.86
SPOCK3-204ENST00000502330 HRCP23327 699 aa32.82■■■□□ 2.84
SPOCK3-204ENST00000502330 LOC105371045A0A1W2PR82 267 aa32.76■■■□□ 2.84
SPOCK3-204ENST00000502330 CECR2Q9BXF3 1484 aa32.68■■■□□ 2.82
SPOCK3-204ENST00000502330 PCGF6Q9BYE7 350 aa32.66■■■□□ 2.82
SPOCK3-204ENST00000502330 MROH2BQ7Z745 1585 aa32.62■■■□□ 2.81
SPOCK3-204ENST00000502330 TRIM41Q8WV44 630 aa32.55■■■□□ 2.8
SPOCK3-204ENST00000502330 WIZO95785 1651 aa32.39■■■□□ 2.78
SPOCK3-204ENST00000502330 BAZ1AQ9NRL2 1556 aaPredicted RBP32.37■■■□□ 2.77
SPOCK3-204ENST00000502330 TRIM26Q12899 539 aaPredicted RBP32.31■■■□□ 2.76
SPOCK3-204ENST00000502330 EIF4G1Q04637 1599 aaKnown RBP32.09■■■□□ 2.73
SPOCK3-204ENST00000502330 TOP2AP11388 1531 aaKnown RBP32.06■■■□□ 2.72
SPOCK3-204ENST00000502330 SMARCA4P51532 1647 aa32.05■■■□□ 2.72
SPOCK3-204ENST00000502330 FAM9AQ8IZU1 332 aaPredicted RBP32.02■■■□□ 2.72
SPOCK3-204ENST00000502330 UNC13AQ9UPW8 1703 aa31.99■■■□□ 2.71
SPOCK3-204ENST00000502330 PPARGC1BQ86YN6 1023 aaKnown RBP31.84■■■□□ 2.69
SPOCK3-204ENST00000502330 CCDC88BA6NC98 1476 aa31.84■■■□□ 2.69
SPOCK3-204ENST00000502330 SMARCA2P51531 1590 aa31.82■■■□□ 2.68
SPOCK3-204ENST00000502330 ZEB1P37275 1124 aaPredicted RBP31.71■■■□□ 2.67
SPOCK3-204ENST00000502330 BICRAQ9NZM4 1560 aa31.7■■■□□ 2.66
SPOCK3-204ENST00000502330 PEG3Q9GZU2 1588 aa31.6■■■□□ 2.65
SPOCK3-204ENST00000502330 ABCC8Q09428 1581 aa31.57■■■□□ 2.64
SPOCK3-204ENST00000502330 EHMT2Q96KQ7 1210 aa31.54■■■□□ 2.64
SPOCK3-204ENST00000502330 PABPN1Q86U42 306 aaKnown RBP eCLIP31.46■■■□□ 2.63
SPOCK3-204ENST00000502330 EEA1Q15075 1411 aa31.46■■■□□ 2.63
SPOCK3-204ENST00000502330 WRNQ14191 1432 aaPredicted RBP eCLIP31.34■■■□□ 2.61
SPOCK3-204ENST00000502330 SOGA1O94964 1423 aa31.31■■■□□ 2.6
SPOCK3-204ENST00000502330 TNIKQ9UKE5 1360 aa31.3■■■□□ 2.6
SPOCK3-204ENST00000502330 ATAD2BQ9ULI0 1458 aa31.25■■■□□ 2.59
SPOCK3-204ENST00000502330 CSRNP3Q8WYN3 585 aa31.24■■■□□ 2.59
SPOCK3-204ENST00000502330 CEP162Q5TB80 1403 aa31.21■■■□□ 2.59
SPOCK3-204ENST00000502330 BAZ1BQ9UIG0 1483 aaKnown RBP31.12■■■□□ 2.57
SPOCK3-204ENST00000502330 RUSC2Q8N2Y8 1516 aa31.12■■■□□ 2.57
SPOCK3-204ENST00000502330 GOLGA3Q08378 1498 aa31.09■■■□□ 2.57
SPOCK3-204ENST00000502330 SYNJ1O43426 1573 aa31■■■□□ 2.55
SPOCK3-204ENST00000502330 UBTFP17480 764 aaKnown RBP30.95■■■□□ 2.55
SPOCK3-204ENST00000502330 CEP164Q9UPV0 1460 aa30.95■■■□□ 2.54
SPOCK3-204ENST00000502330 KIF21BO75037 1637 aa30.94■■■□□ 2.54
SPOCK3-204ENST00000502330 CCER1Q8TC90 406 aaPredicted RBP30.79■■■□□ 2.52
SPOCK3-204ENST00000502330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.79■■■□□ 2.52
SPOCK3-204ENST00000502330 NCAPD3P42695 1498 aa30.76■■■□□ 2.51
SPOCK3-204ENST00000502330 TOP2BQ02880 1626 aa30.76■■■□□ 2.51
SPOCK3-204ENST00000502330 HMGXB3Q12766 1538 aa30.75■■■□□ 2.51
SPOCK3-204ENST00000502330 BIVM-ERCC5R4GMW8 1640 aa30.66■■■□□ 2.5
SPOCK3-204ENST00000502330 CLIP1P30622 1438 aa30.66■■■□□ 2.5
SPOCK3-204ENST00000502330 RAPGEF2Q9Y4G8 1499 aa30.59■■■□□ 2.49
SPOCK3-204ENST00000502330 VPS8Q8N3P4 1428 aa30.58■■■□□ 2.49
SPOCK3-204ENST00000502330 TTBK1Q5TCY1 1321 aaPredicted RBP30.55■■■□□ 2.48
SPOCK3-204ENST00000502330 ERICH3Q5RHP9 1530 aa30.49■■■□□ 2.47
SPOCK3-204ENST00000502330 PRXQ9BXM0 1461 aa30.46■■■□□ 2.47
SPOCK3-204ENST00000502330 CFTRP13569 1480 aa30.44■■■□□ 2.46
SPOCK3-204ENST00000502330 CUX1P39880 1505 aa30.39■■■□□ 2.46
SPOCK3-204ENST00000502330 APLP2Q06481 763 aa30.34■■■□□ 2.45
SPOCK3-204ENST00000502330 KIF27Q86VH2 1401 aa30.31■■■□□ 2.44
SPOCK3-204ENST00000502330 ARAP1Q96P48 1450 aa30.19■■■□□ 2.42
SPOCK3-204ENST00000502330 DIEXFQ68CQ4 756 aaKnown RBP30.19■■■□□ 2.42
SPOCK3-204ENST00000502330 PRDM2Q13029 1718 aa30.18■■■□□ 2.42
SPOCK3-204ENST00000502330 HNRNPUL2Q1KMD3 747 aaKnown RBP30.14■■■□□ 2.41
SPOCK3-204ENST00000502330 CADPSQ9ULU8 1353 aa30.09■■■□□ 2.41
SPOCK3-204ENST00000502330 ZNF316A6NFI3 1004 aaPredicted RBP30.08■■■□□ 2.41
SPOCK3-204ENST00000502330 RANGAP1P46060 587 aaPredicted RBP30.07■■■□□ 2.4
SPOCK3-204ENST00000502330 SCAF1Q9H7N4 1312 aaKnown RBP30.04■■■□□ 2.4
SPOCK3-204ENST00000502330 IGF1RP08069 1367 aa29.96■■■□□ 2.39
SPOCK3-204ENST00000502330 CLSPNQ9HAW4 1339 aa29.95■■■□□ 2.38
SPOCK3-204ENST00000502330 ARHGAP35Q9NRY4 1499 aa29.95■■■□□ 2.38
SPOCK3-204ENST00000502330 CUX2O14529 1486 aa29.93■■■□□ 2.38
SPOCK3-204ENST00000502330 ACIN1Q9UKV3 1341 aaKnown RBP29.92■■■□□ 2.38
SPOCK3-204ENST00000502330 RRBP1Q9P2E9 1410 aaKnown RBP29.91■■■□□ 2.38
SPOCK3-204ENST00000502330 KANK4Q5T7N3 995 aaPredicted RBP29.89■■■□□ 2.38
SPOCK3-204ENST00000502330 FGD5Q6ZNL6 1462 aa29.85■■■□□ 2.37
SPOCK3-204ENST00000502330 CC2D2AQ9P2K1 1620 aa29.82■■■□□ 2.36
SPOCK3-204ENST00000502330 CENPBP07199 599 aaPredicted RBP29.82■■■□□ 2.36
SPOCK3-204ENST00000502330 CARMIL1Q5VZK9 1371 aa29.81■■■□□ 2.36
SPOCK3-204ENST00000502330 MAP3K1Q13233 1512 aa29.8■■■□□ 2.36
SPOCK3-204ENST00000502330 NEUROD1Q13562 356 aa29.77■■■□□ 2.36
SPOCK3-204ENST00000502330 DHX57Q6P158 1386 aaKnown RBP29.76■■■□□ 2.35
SPOCK3-204ENST00000502330 FANCD2Q9BXW9 1451 aa29.73■■■□□ 2.35
SPOCK3-204ENST00000502330 CCNB3Q8WWL7 1395 aa29.71■■■□□ 2.35
SPOCK3-204ENST00000502330 DNMBPQ6XZF7 1577 aa29.65■■■□□ 2.34
SPOCK3-204ENST00000502330 TIAM1Q13009 1591 aa29.64■■■□□ 2.33
SPOCK3-204ENST00000502330 PELP1Q8IZL8 1130 aaKnown RBP29.62■■■□□ 2.33
SPOCK3-204ENST00000502330 ABCA10Q8WWZ4 1543 aa29.61■■■□□ 2.33
SPOCK3-204ENST00000502330 FHAD1B1AJZ9 1412 aa29.59■■■□□ 2.33
SPOCK3-204ENST00000502330 TOPBP1Q92547 1522 aa29.55■■■□□ 2.32
SPOCK3-204ENST00000502330 LRRC9Q6ZRR7 1453 aa29.53■■■□□ 2.32
SPOCK3-204ENST00000502330 POLA1P09884 1462 aaPredicted RBP29.52■■■□□ 2.32
SPOCK3-204ENST00000502330 MIER1Q8N108 512 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms