Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALX3O95076 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.84■□□□□ 0.29
ALX3O95076 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.84■□□□□ 0.29
ALX3O95076 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
ALX3O95076 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.84■□□□□ 0.29
ALX3O95076 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.84■□□□□ 0.29
ALX3O95076 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
ALX3O95076 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.84■□□□□ 0.29
ALX3O95076 TFP1-202ENST00000475455 1573 ntBASIC16.84■□□□□ 0.29
ALX3O95076 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.84■□□□□ 0.29
ALX3O95076 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 LINC01465-201ENST00000408887 1940 ntBASIC16.84■□□□□ 0.29
ALX3O95076 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALX3O95076 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.84■□□□□ 0.29
ALX3O95076 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ALX3O95076 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
ALX3O95076 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ALX3O95076 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ALX3O95076 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ALX3O95076 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ALX3O95076 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
ALX3O95076 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.83■□□□□ 0.28
ALX3O95076 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ALX3O95076 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 MST1L-201ENST00000442552 2185 ntBASIC16.83■□□□□ 0.28
ALX3O95076 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.83■□□□□ 0.28
ALX3O95076 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.83■□□□□ 0.28
ALX3O95076 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.83■□□□□ 0.28
ALX3O95076 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.83■□□□□ 0.28
ALX3O95076 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.83■□□□□ 0.28
ALX3O95076 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.83■□□□□ 0.28
ALX3O95076 AL513477.1-201ENST00000602865 2407 ntBASIC16.83■□□□□ 0.28
ALX3O95076 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.83■□□□□ 0.28
ALX3O95076 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
ALX3O95076 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALX3O95076 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.83■□□□□ 0.28
ALX3O95076 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALX3O95076 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
ALX3O95076 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALX3O95076 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALX3O95076 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.82■□□□□ 0.28
ALX3O95076 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
ALX3O95076 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ALX3O95076 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALX3O95076 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALX3O95076 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALX3O95076 MKRN4P-201ENST00000444706 1521 ntBASIC16.82■□□□□ 0.28
ALX3O95076 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALX3O95076 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
ALX3O95076 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ALX3O95076 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALX3O95076 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ALX3O95076 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.82■□□□□ 0.28
ALX3O95076 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.82■□□□□ 0.28
ALX3O95076 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.82■□□□□ 0.28
ALX3O95076 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ALX3O95076 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.82■□□□□ 0.28
ALX3O95076 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALX3O95076 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALX3O95076 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALX3O95076 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.82■□□□□ 0.28
ALX3O95076 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALX3O95076 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALX3O95076 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ALX3O95076 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALX3O95076 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALX3O95076 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.81■□□□□ 0.28
ALX3O95076 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.81■□□□□ 0.28
ALX3O95076 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALX3O95076 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms