RNA–Protein interactions for RNA: ENST00000296849.9

NKD2-202, Transcript of naked cuticle homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKD2, Length 2,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKD2-202ENST00000296849 NISCHQ9Y2I1 1504 aa39.72■■■■□ 3.95
NKD2-202ENST00000296849 CCDC180Q9P1Z9 1646 aa34.52■■■■□ 3.12
NKD2-202ENST00000296849 ZCCHC6Q5VYS8 1495 aaKnown RBP33.42■■■□□ 2.94
NKD2-202ENST00000296849 DCAF1Q9Y4B6 1507 aa32.81■■■□□ 2.84
NKD2-202ENST00000296849 DCAF8L2P0C7V8 631 aa32.76■■■□□ 2.84
NKD2-202ENST00000296849 SHROOM4Q9ULL8 1493 aa32.63■■■□□ 2.81
NKD2-202ENST00000296849 ABCC9O60706 1549 aa32.48■■■□□ 2.79
NKD2-202ENST00000296849 MYO15BQ96JP2 1530 aa32.32■■■□□ 2.76
NKD2-202ENST00000296849 NACADO15069 1562 aa32.09■■■□□ 2.73
NKD2-202ENST00000296849 SCRIBQ14160 1630 aa31.84■■■□□ 2.69
NKD2-202ENST00000296849 RB1CC1Q8TDY2 1594 aa31.78■■■□□ 2.68
NKD2-202ENST00000296849 SUPT5HO00267 1087 aaKnown RBP31.48■■■□□ 2.63
NKD2-202ENST00000296849 UNC13AQ9UPW8 1703 aa31.2■■■□□ 2.59
NKD2-202ENST00000296849 RSF1Q96T23 1441 aaPredicted RBP30.91■■■□□ 2.54
NKD2-202ENST00000296849 CECR2Q9BXF3 1484 aa30.87■■■□□ 2.53
NKD2-202ENST00000296849 BICRAQ9NZM4 1560 aa30.84■■■□□ 2.53
NKD2-202ENST00000296849 MROH2BQ7Z745 1585 aa30.72■■■□□ 2.51
NKD2-202ENST00000296849 PABPN1Q86U42 306 aaKnown RBP eCLIP30.68■■■□□ 2.5
NKD2-202ENST00000296849 BAZ1AQ9NRL2 1556 aaPredicted RBP30.65■■■□□ 2.5
NKD2-202ENST00000296849 SMARCA4P51532 1647 aa30.5■■■□□ 2.47
NKD2-202ENST00000296849 WIZO95785 1651 aa30.5■■■□□ 2.47
NKD2-202ENST00000296849 CHIC1Q5VXU3 224 aa30.29■■■□□ 2.44
NKD2-202ENST00000296849 TOP2AP11388 1531 aaKnown RBP30.16■■■□□ 2.42
NKD2-202ENST00000296849 PEG3Q9GZU2 1588 aa30.09■■■□□ 2.41
NKD2-202ENST00000296849 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
NKD2-202ENST00000296849 SMARCA2P51531 1590 aa29.91■■■□□ 2.38
NKD2-202ENST00000296849 EIF4G1Q04637 1599 aaKnown RBP29.89■■■□□ 2.37
NKD2-202ENST00000296849 CCDC88BA6NC98 1476 aa29.86■■■□□ 2.37
NKD2-202ENST00000296849 BAZ1BQ9UIG0 1483 aaKnown RBP29.78■■■□□ 2.36
NKD2-202ENST00000296849 NCAPD3P42695 1498 aa29.61■■■□□ 2.33
NKD2-202ENST00000296849 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
NKD2-202ENST00000296849 TRIM41Q8WV44 630 aa29.56■■■□□ 2.32
NKD2-202ENST00000296849 HRCP23327 699 aa29.53■■■□□ 2.32
NKD2-202ENST00000296849 CC2D2AQ9P2K1 1620 aa29.4■■■□□ 2.3
NKD2-202ENST00000296849 ABCC8Q09428 1581 aa29.35■■■□□ 2.29
NKD2-202ENST00000296849 PCGF6Q9BYE7 350 aa29.26■■■□□ 2.27
NKD2-202ENST00000296849 LOC105371045A0A1W2PR82 267 aa29.13■■■□□ 2.25
NKD2-202ENST00000296849 WRNQ14191 1432 aaPredicted RBP eCLIP29.08■■■□□ 2.25
NKD2-202ENST00000296849 FAM9AQ8IZU1 332 aaPredicted RBP29.06■■■□□ 2.24
NKD2-202ENST00000296849 CFTRP13569 1480 aa29.03■■■□□ 2.24
NKD2-202ENST00000296849 SYNJ1O43426 1573 aa28.99■■■□□ 2.23
NKD2-202ENST00000296849 TRIM26Q12899 539 aaPredicted RBP28.99■■■□□ 2.23
NKD2-202ENST00000296849 PRDM2Q13029 1718 aa28.93■■■□□ 2.22
NKD2-202ENST00000296849 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
NKD2-202ENST00000296849 TOP2BQ02880 1626 aa28.83■■■□□ 2.21
NKD2-202ENST00000296849 SOGA1O94964 1423 aa28.82■■■□□ 2.2
NKD2-202ENST00000296849 BIVM-ERCC5R4GMW8 1640 aa28.8■■■□□ 2.2
NKD2-202ENST00000296849 EEA1Q15075 1411 aa28.76■■■□□ 2.19
NKD2-202ENST00000296849 CUX1P39880 1505 aa28.71■■■□□ 2.19
NKD2-202ENST00000296849 RUSC2Q8N2Y8 1516 aa28.71■■■□□ 2.19
NKD2-202ENST00000296849 EHMT2Q96KQ7 1210 aa28.68■■■□□ 2.18
NKD2-202ENST00000296849 ZEB1P37275 1124 aaPredicted RBP28.62■■■□□ 2.17
NKD2-202ENST00000296849 NESP48681 1621 aa28.6■■■□□ 2.17
NKD2-202ENST00000296849 DNAJC5BQ9UF47 199 aa28.6■■■□□ 2.17
NKD2-202ENST00000296849 CSRNP3Q8WYN3 585 aa28.6■■■□□ 2.17
NKD2-202ENST00000296849 FANCD2Q9BXW9 1451 aa28.58■■■□□ 2.17
NKD2-202ENST00000296849 LAMC3Q9Y6N6 1575 aa28.58■■■□□ 2.17
NKD2-202ENST00000296849 PPARGC1BQ86YN6 1023 aaKnown RBP28.48■■■□□ 2.15
NKD2-202ENST00000296849 KIF21BO75037 1637 aa28.41■■■□□ 2.14
NKD2-202ENST00000296849 GOLGA3Q08378 1498 aa28.4■■■□□ 2.14
NKD2-202ENST00000296849 CEP164Q9UPV0 1460 aa28.38■■■□□ 2.13
NKD2-202ENST00000296849 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
NKD2-202ENST00000296849 FGD5Q6ZNL6 1462 aa28.36■■■□□ 2.13
NKD2-202ENST00000296849 TNIKQ9UKE5 1360 aa28.34■■■□□ 2.13
NKD2-202ENST00000296849 PDS5BQ9NTI5 1447 aa28.34■■■□□ 2.13
NKD2-202ENST00000296849 KIF27Q86VH2 1401 aa28.31■■■□□ 2.12
NKD2-202ENST00000296849 TOPBP1Q92547 1522 aa28.3■■■□□ 2.12
NKD2-202ENST00000296849 KIF21AQ7Z4S6 1674 aa28.27■■■□□ 2.12
NKD2-202ENST00000296849 UBTFP17480 764 aaKnown RBP28.27■■■□□ 2.12
NKD2-202ENST00000296849 CEP162Q5TB80 1403 aa28.24■■■□□ 2.11
NKD2-202ENST00000296849 URB2Q14146 1524 aaKnown RBP28.23■■■□□ 2.11
NKD2-202ENST00000296849 RAPGEF2Q9Y4G8 1499 aa28.22■■■□□ 2.11
NKD2-202ENST00000296849 CUX2O14529 1486 aa28.21■■■□□ 2.11
NKD2-202ENST00000296849 PRXQ9BXM0 1461 aa28.19■■■□□ 2.1
NKD2-202ENST00000296849 POLA1P09884 1462 aaPredicted RBP28.18■■■□□ 2.1
NKD2-202ENST00000296849 ERICH3Q5RHP9 1530 aa28.17■■■□□ 2.1
NKD2-202ENST00000296849 RAD54L2Q9Y4B4 1467 aa28.11■■■□□ 2.09
NKD2-202ENST00000296849 ABCA10Q8WWZ4 1543 aa28.09■■■□□ 2.09
NKD2-202ENST00000296849 IGF1RP08069 1367 aa28.04■■■□□ 2.08
NKD2-202ENST00000296849 WDR97A6NE52 1622 aa28.02■■■□□ 2.08
NKD2-202ENST00000296849 MRC2Q9UBG0 1479 aa27.99■■■□□ 2.07
NKD2-202ENST00000296849 CLIP1P30622 1438 aa27.96■■■□□ 2.07
NKD2-202ENST00000296849 CARMIL1Q5VZK9 1371 aa27.91■■■□□ 2.06
NKD2-202ENST00000296849 TARBP1Q13395 1621 aaKnown RBP27.87■■■□□ 2.05
NKD2-202ENST00000296849 ABCA5Q8WWZ7 1642 aa27.87■■■□□ 2.05
NKD2-202ENST00000296849 WDR62O43379 1518 aa27.83■■■□□ 2.05
NKD2-202ENST00000296849 CUL7Q14999 1698 aa27.83■■■□□ 2.05
NKD2-202ENST00000296849 ERCC6Q03468 1493 aa27.81■■■□□ 2.04
NKD2-202ENST00000296849 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
NKD2-202ENST00000296849 RANGAP1P46060 587 aaPredicted RBP27.79■■■□□ 2.04
NKD2-202ENST00000296849 GAPVD1Q14C86 1478 aa27.78■■■□□ 2.04
NKD2-202ENST00000296849 VPS8Q8N3P4 1428 aa27.74■■■□□ 2.03
NKD2-202ENST00000296849 THOC2Q8NI27 1593 aaKnown RBP27.72■■■□□ 2.03
NKD2-202ENST00000296849 ARAP1Q96P48 1450 aa27.67■■■□□ 2.02
NKD2-202ENST00000296849 IFT140Q96RY7 1462 aa27.67■■■□□ 2.02
NKD2-202ENST00000296849 PBRM1Q86U86 1689 aa27.65■■■□□ 2.02
NKD2-202ENST00000296849 ARHGAP35Q9NRY4 1499 aa27.62■■■□□ 2.01
NKD2-202ENST00000296849 CCER1Q8TC90 406 aaPredicted RBP27.61■■■□□ 2.01
NKD2-202ENST00000296849 AQRO60306 1485 aaKnown RBP eCLIP27.6■■■□□ 2.01
NKD2-202ENST00000296849 CTTNBP2Q8WZ74 1663 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms