RNA–Protein interactions for RNA: ENST00000358141.6

LRRC20-203, Transcript of leucine rich repeat containing 20, humanhuman

TSL 2 BASIC

Gene LRRC20, Length 2,924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC20-203ENST00000358141 NISCHQ9Y2I1 1504 aa37.11■■■■□ 3.53
LRRC20-203ENST00000358141 CCDC180Q9P1Z9 1646 aa31.62■■■□□ 2.65
LRRC20-203ENST00000358141 SHROOM4Q9ULL8 1493 aa31.62■■■□□ 2.65
LRRC20-203ENST00000358141 ZCCHC6Q5VYS8 1495 aaKnown RBP31.34■■■□□ 2.61
LRRC20-203ENST00000358141 DCAF8L2P0C7V8 631 aa31.01■■■□□ 2.55
LRRC20-203ENST00000358141 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
LRRC20-203ENST00000358141 DCAF1Q9Y4B6 1507 aa30.39■■■□□ 2.46
LRRC20-203ENST00000358141 CHIC1Q5VXU3 224 aa29.89■■■□□ 2.38
LRRC20-203ENST00000358141 MYO15BQ96JP2 1530 aa29.7■■■□□ 2.35
LRRC20-203ENST00000358141 SCRIBQ14160 1630 aa29.69■■■□□ 2.34
LRRC20-203ENST00000358141 ABCC9O60706 1549 aa29.57■■■□□ 2.32
LRRC20-203ENST00000358141 NACADO15069 1562 aa29.3■■■□□ 2.28
LRRC20-203ENST00000358141 RSF1Q96T23 1441 aaPredicted RBP29.3■■■□□ 2.28
LRRC20-203ENST00000358141 LOC105371045A0A1W2PR82 267 aa29.04■■■□□ 2.24
LRRC20-203ENST00000358141 CECR2Q9BXF3 1484 aa28.99■■■□□ 2.23
LRRC20-203ENST00000358141 RB1CC1Q8TDY2 1594 aa28.99■■■□□ 2.23
LRRC20-203ENST00000358141 MROH2BQ7Z745 1585 aa28.86■■■□□ 2.21
LRRC20-203ENST00000358141 PCGF6Q9BYE7 350 aa28.81■■■□□ 2.2
LRRC20-203ENST00000358141 HRCP23327 699 aa28.79■■■□□ 2.2
LRRC20-203ENST00000358141 TRIM41Q8WV44 630 aa28.79■■■□□ 2.2
LRRC20-203ENST00000358141 WIZO95785 1651 aa28.71■■■□□ 2.19
LRRC20-203ENST00000358141 FAM9AQ8IZU1 332 aaPredicted RBP28.61■■■□□ 2.17
LRRC20-203ENST00000358141 BAZ1AQ9NRL2 1556 aaPredicted RBP28.53■■■□□ 2.16
LRRC20-203ENST00000358141 UNC13AQ9UPW8 1703 aa28.45■■■□□ 2.14
LRRC20-203ENST00000358141 EHMT2Q96KQ7 1210 aa28.42■■■□□ 2.14
LRRC20-203ENST00000358141 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
LRRC20-203ENST00000358141 TRIM26Q12899 539 aaPredicted RBP28.26■■■□□ 2.12
LRRC20-203ENST00000358141 PABPN1Q86U42 306 aaKnown RBP eCLIP28.26■■■□□ 2.12
LRRC20-203ENST00000358141 PPARGC1BQ86YN6 1023 aaKnown RBP28.25■■■□□ 2.11
LRRC20-203ENST00000358141 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
LRRC20-203ENST00000358141 EIF4G1Q04637 1599 aaKnown RBP28.16■■■□□ 2.1
LRRC20-203ENST00000358141 CCDC88BA6NC98 1476 aa28.12■■■□□ 2.09
LRRC20-203ENST00000358141 BICRAQ9NZM4 1560 aa28.08■■■□□ 2.09
LRRC20-203ENST00000358141 SMARCA2P51531 1590 aa28.07■■■□□ 2.08
LRRC20-203ENST00000358141 ABCC8Q09428 1581 aa28.02■■■□□ 2.08
LRRC20-203ENST00000358141 PELP1Q8IZL8 1130 aaKnown RBP27.77■■■□□ 2.04
LRRC20-203ENST00000358141 PEG3Q9GZU2 1588 aa27.72■■■□□ 2.03
LRRC20-203ENST00000358141 SOGA1O94964 1423 aa27.71■■■□□ 2.03
LRRC20-203ENST00000358141 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.01
LRRC20-203ENST00000358141 BAZ1BQ9UIG0 1483 aaKnown RBP27.59■■■□□ 2.01
LRRC20-203ENST00000358141 RUSC2Q8N2Y8 1516 aa27.58■■■□□ 2.01
LRRC20-203ENST00000358141 WRNQ14191 1432 aaPredicted RBP eCLIP27.56■■■□□ 22e-8■■■■■ 75.2
LRRC20-203ENST00000358141 CSRNP3Q8WYN3 585 aa27.55■■■□□ 2
LRRC20-203ENST00000358141 ZEB1P37275 1124 aaPredicted RBP27.54■■■□□ 2
LRRC20-203ENST00000358141 EEA1Q15075 1411 aa27.49■■□□□ 1.99
LRRC20-203ENST00000358141 UBTFP17480 764 aaKnown RBP27.49■■□□□ 1.99
LRRC20-203ENST00000358141 CEP162Q5TB80 1403 aa27.48■■□□□ 1.99
LRRC20-203ENST00000358141 TTBK1Q5TCY1 1321 aaPredicted RBP27.44■■□□□ 1.98
LRRC20-203ENST00000358141 TNIKQ9UKE5 1360 aa27.43■■□□□ 1.98
LRRC20-203ENST00000358141 SYNJ1O43426 1573 aa27.41■■□□□ 1.98
LRRC20-203ENST00000358141 GOLGA3Q08378 1498 aa27.33■■□□□ 1.97
LRRC20-203ENST00000358141 SCAF1Q9H7N4 1312 aaKnown RBP27.29■■□□□ 1.96
LRRC20-203ENST00000358141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.24■■□□□ 1.95
LRRC20-203ENST00000358141 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
LRRC20-203ENST00000358141 CCER1Q8TC90 406 aaPredicted RBP27.16■■□□□ 1.94
LRRC20-203ENST00000358141 KIF21BO75037 1637 aa27.12■■□□□ 1.93
LRRC20-203ENST00000358141 NCAPD3P42695 1498 aa27.11■■□□□ 1.93
LRRC20-203ENST00000358141 HMGXB3Q12766 1538 aa27.09■■□□□ 1.93
LRRC20-203ENST00000358141 TOP2BQ02880 1626 aa27.07■■□□□ 1.92
LRRC20-203ENST00000358141 RANGAP1P46060 587 aaPredicted RBP27.06■■□□□ 1.92
LRRC20-203ENST00000358141 CLIP1P30622 1438 aa27.04■■□□□ 1.92
LRRC20-203ENST00000358141 RAPGEF2Q9Y4G8 1499 aa27.03■■□□□ 1.92
LRRC20-203ENST00000358141 BIVM-ERCC5R4GMW8 1640 aa26.97■■□□□ 1.91
LRRC20-203ENST00000358141 CUX1P39880 1505 aa26.88■■□□□ 1.89
LRRC20-203ENST00000358141 VPS8Q8N3P4 1428 aa26.86■■□□□ 1.89
LRRC20-203ENST00000358141 CFTRP13569 1480 aa26.85■■□□□ 1.89
LRRC20-203ENST00000358141 APLP2Q06481 763 aa26.84■■□□□ 1.89
LRRC20-203ENST00000358141 HNRNPUL2Q1KMD3 747 aaKnown RBP26.76■■□□□ 1.87
LRRC20-203ENST00000358141 PRXQ9BXM0 1461 aa26.75■■□□□ 1.87
LRRC20-203ENST00000358141 KIF27Q86VH2 1401 aa26.73■■□□□ 1.87
LRRC20-203ENST00000358141 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
LRRC20-203ENST00000358141 MYT1Q01538 1121 aa26.67■■□□□ 1.86
LRRC20-203ENST00000358141 CADPSQ9ULU8 1353 aa26.62■■□□□ 1.85
LRRC20-203ENST00000358141 PRDM2Q13029 1718 aa26.61■■□□□ 1.85
LRRC20-203ENST00000358141 ARAP1Q96P48 1450 aa26.58■■□□□ 1.85
LRRC20-203ENST00000358141 CC2D2AQ9P2K1 1620 aa26.58■■□□□ 1.85
LRRC20-203ENST00000358141 ACIN1Q9UKV3 1341 aaKnown RBP26.58■■□□□ 1.84
LRRC20-203ENST00000358141 CUX2O14529 1486 aa26.54■■□□□ 1.84
LRRC20-203ENST00000358141 NEUROD1Q13562 356 aa26.53■■□□□ 1.84
LRRC20-203ENST00000358141 DIEXFQ68CQ4 756 aaKnown RBP26.46■■□□□ 1.83
LRRC20-203ENST00000358141 KANK4Q5T7N3 995 aaPredicted RBP26.46■■□□□ 1.83
LRRC20-203ENST00000358141 FGD5Q6ZNL6 1462 aa26.46■■□□□ 1.83
LRRC20-203ENST00000358141 IGF1RP08069 1367 aa26.43■■□□□ 1.82
LRRC20-203ENST00000358141 ARHGAP35Q9NRY4 1499 aa26.4■■□□□ 1.82
LRRC20-203ENST00000358141 GTF3C3Q9Y5Q9 886 aa26.39■■□□□ 1.82
LRRC20-203ENST00000358141 FANCD2Q9BXW9 1451 aa26.38■■□□□ 1.81
LRRC20-203ENST00000358141 CARMIL1Q5VZK9 1371 aa26.35■■□□□ 1.81
LRRC20-203ENST00000358141 ZNF316A6NFI3 1004 aaPredicted RBP26.32■■□□□ 1.8
LRRC20-203ENST00000358141 NESP48681 1621 aa26.28■■□□□ 1.8
LRRC20-203ENST00000358141 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
LRRC20-203ENST00000358141 CENPBP07199 599 aaPredicted RBP26.2■■□□□ 1.78
LRRC20-203ENST00000358141 DNMBPQ6XZF7 1577 aa26.19■■□□□ 1.78
LRRC20-203ENST00000358141 TOPBP1Q92547 1522 aa26.17■■□□□ 1.78
LRRC20-203ENST00000358141 ITGAEP38570 1179 aa26.17■■□□□ 1.78
LRRC20-203ENST00000358141 P3H3Q8IVL6 736 aa26.17■■□□□ 1.78
LRRC20-203ENST00000358141 RRBP1Q9P2E9 1410 aaKnown RBP26.17■■□□□ 1.78
LRRC20-203ENST00000358141 POLA1P09884 1462 aaPredicted RBP26.16■■□□□ 1.78
LRRC20-203ENST00000358141 CCNB3Q8WWL7 1395 aa26.13■■□□□ 1.77
LRRC20-203ENST00000358141 DHX57Q6P158 1386 aaKnown RBP26.12■■□□□ 1.77
LRRC20-203ENST00000358141 ABCA10Q8WWZ4 1543 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms