Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC29.74■■■□□ 2.35
CASKIN1Q8WXD9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
CASKIN1Q8WXD9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC29.74■■■□□ 2.35
CASKIN1Q8WXD9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CASKIN1Q8WXD9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC29.74■■■□□ 2.35
CASKIN1Q8WXD9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CASKIN1Q8WXD9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CASKIN1Q8WXD9 KRT18P56-201ENST00000507275 550 ntBASIC29.74■■■□□ 2.35
CASKIN1Q8WXD9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC29.74■■■□□ 2.35
CASKIN1Q8WXD9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC29.74■■■□□ 2.35
CASKIN1Q8WXD9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CASKIN1Q8WXD9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC29.74■■■□□ 2.35
CASKIN1Q8WXD9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CASKIN1Q8WXD9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC29.73■■■□□ 2.35
CASKIN1Q8WXD9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC29.73■■■□□ 2.35
CASKIN1Q8WXD9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
CASKIN1Q8WXD9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CASKIN1Q8WXD9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
CASKIN1Q8WXD9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CASKIN1Q8WXD9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CASKIN1Q8WXD9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC29.73■■■□□ 2.35
CASKIN1Q8WXD9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
CASKIN1Q8WXD9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CASKIN1Q8WXD9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CASKIN1Q8WXD9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 AC093458.2-201ENST00000623150 629 ntBASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 AC092597.1-201ENST00000487352 616 ntBASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 NPAP1P7-201ENST00000613027 823 ntBASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC29.71■■■□□ 2.35
CASKIN1Q8WXD9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
CASKIN1Q8WXD9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CASKIN1Q8WXD9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
CASKIN1Q8WXD9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC29.7■■■□□ 2.34
CASKIN1Q8WXD9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CASKIN1Q8WXD9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC29.7■■■□□ 2.34
CASKIN1Q8WXD9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CASKIN1Q8WXD9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC29.7■■■□□ 2.34
CASKIN1Q8WXD9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC29.7■■■□□ 2.34
CASKIN1Q8WXD9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 AL645929.1-201ENST00000420084 975 ntBASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 AC034232.1-201ENST00000506026 1064 ntBASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CASKIN1Q8WXD9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 HCG4P8-203ENST00000443049 980 ntBASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CASKIN1Q8WXD9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms