RNA–Protein interactions for RNA: ENST00000262633.8

RBM42-201, Transcript of RNA binding motif protein 42, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RBM42, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-201ENST00000262633 NISCHQ9Y2I1 1504 aa44.11■■■■■ 4.65
RBM42-201ENST00000262633 CCDC180Q9P1Z9 1646 aa38.81■■■■□ 3.8
RBM42-201ENST00000262633 ABCC9O60706 1549 aa37.12■■■■□ 3.53
RBM42-201ENST00000262633 ZCCHC6Q5VYS8 1495 aaKnown RBP36.96■■■■□ 3.51
RBM42-201ENST00000262633 DCAF1Q9Y4B6 1507 aa36.56■■■■□ 3.44
RBM42-201ENST00000262633 DCAF8L2P0C7V8 631 aa36.45■■■■□ 3.43
RBM42-201ENST00000262633 MYO15BQ96JP2 1530 aa36.39■■■■□ 3.42
RBM42-201ENST00000262633 NACADO15069 1562 aa36.29■■■■□ 3.4
RBM42-201ENST00000262633 RB1CC1Q8TDY2 1594 aa36.1■■■■□ 3.37
RBM42-201ENST00000262633 SCRIBQ14160 1630 aa35.49■■■■□ 3.27
RBM42-201ENST00000262633 SHROOM4Q9ULL8 1493 aa35.39■■■■□ 3.26
RBM42-201ENST00000262633 UNC13AQ9UPW8 1703 aa35.24■■■■□ 3.23
RBM42-201ENST00000262633 BICRAQ9NZM4 1560 aa34.97■■■■□ 3.19
RBM42-201ENST00000262633 PABPN1Q86U42 306 aaKnown RBP eCLIP34.83■■■■□ 3.17
RBM42-201ENST00000262633 CECR2Q9BXF3 1484 aa34.25■■■■□ 3.07
RBM42-201ENST00000262633 BAZ1AQ9NRL2 1556 aaPredicted RBP34.14■■■■□ 3.06
RBM42-201ENST00000262633 SMARCA4P51532 1647 aa34.03■■■■□ 3.04
RBM42-201ENST00000262633 MROH2BQ7Z745 1585 aa34.01■■■■□ 3.03
RBM42-201ENST00000262633 EIF4G1Q04637 1599 aaKnown RBP33.99■■■■□ 3.03
RBM42-201ENST00000262633 RSF1Q96T23 1441 aaPredicted RBP33.96■■■■□ 3.03
RBM42-201ENST00000262633 SUPT5HO00267 1087 aaKnown RBP33.74■■■□□ 2.99
RBM42-201ENST00000262633 PEG3Q9GZU2 1588 aa33.71■■■□□ 2.99
RBM42-201ENST00000262633 WIZO95785 1651 aa33.66■■■□□ 2.98
RBM42-201ENST00000262633 SMARCA2P51531 1590 aa33.64■■■□□ 2.98
RBM42-201ENST00000262633 ATAD2BQ9ULI0 1458 aa33.64■■■□□ 2.98
RBM42-201ENST00000262633 CC2D2AQ9P2K1 1620 aa33.61■■■□□ 2.97
RBM42-201ENST00000262633 NCAPD3P42695 1498 aa33.48■■■□□ 2.95
RBM42-201ENST00000262633 BAZ1BQ9UIG0 1483 aaKnown RBP33.41■■■□□ 2.94
RBM42-201ENST00000262633 HMGXB3Q12766 1538 aa33.41■■■□□ 2.94
RBM42-201ENST00000262633 TOP2AP11388 1531 aaKnown RBP33.4■■■□□ 2.94
RBM42-201ENST00000262633 DNAJC5BQ9UF47 199 aa33.23■■■□□ 2.91
RBM42-201ENST00000262633 CCDC88BA6NC98 1476 aa32.98■■■□□ 2.87
RBM42-201ENST00000262633 CFTRP13569 1480 aa32.56■■■□□ 2.8
RBM42-201ENST00000262633 CADPSQ9ULU8 1353 aa32.55■■■□□ 2.8
RBM42-201ENST00000262633 LAMC3Q9Y6N6 1575 aa32.44■■■□□ 2.78
RBM42-201ENST00000262633 NESP48681 1621 aa32.38■■■□□ 2.77
RBM42-201ENST00000262633 PRDM2Q13029 1718 aa32.32■■■□□ 2.76
RBM42-201ENST00000262633 PDS5BQ9NTI5 1447 aa32.21■■■□□ 2.75
RBM42-201ENST00000262633 FANCD2Q9BXW9 1451 aa32.18■■■□□ 2.74
RBM42-201ENST00000262633 CEP164Q9UPV0 1460 aa32.06■■■□□ 2.72
RBM42-201ENST00000262633 ABCC8Q09428 1581 aa32.06■■■□□ 2.72
RBM42-201ENST00000262633 CHIC1Q5VXU3 224 aa32.02■■■□□ 2.72
RBM42-201ENST00000262633 KIF21AQ7Z4S6 1674 aa32.01■■■□□ 2.71
RBM42-201ENST00000262633 WRNQ14191 1432 aaPredicted RBP eCLIP32■■■□□ 2.71
RBM42-201ENST00000262633 ERCC6Q03468 1493 aa31.94■■■□□ 2.7
RBM42-201ENST00000262633 CUX1P39880 1505 aa31.86■■■□□ 2.69
RBM42-201ENST00000262633 SYNJ1O43426 1573 aa31.86■■■□□ 2.69
RBM42-201ENST00000262633 TRIM41Q8WV44 630 aa31.84■■■□□ 2.69
RBM42-201ENST00000262633 TOP2BQ02880 1626 aa31.82■■■□□ 2.68
RBM42-201ENST00000262633 MRC2Q9UBG0 1479 aa31.82■■■□□ 2.68
RBM42-201ENST00000262633 DNMBPQ6XZF7 1577 aa31.8■■■□□ 2.68
RBM42-201ENST00000262633 URB2Q14146 1524 aaKnown RBP31.8■■■□□ 2.68
RBM42-201ENST00000262633 BIVM-ERCC5R4GMW8 1640 aa31.79■■■□□ 2.68
RBM42-201ENST00000262633 TOPBP1Q92547 1522 aa31.76■■■□□ 2.68
RBM42-201ENST00000262633 THOC2Q8NI27 1593 aaKnown RBP31.71■■■□□ 2.67
RBM42-201ENST00000262633 WDR62O43379 1518 aa31.69■■■□□ 2.66
RBM42-201ENST00000262633 FGD5Q6ZNL6 1462 aa31.61■■■□□ 2.65
RBM42-201ENST00000262633 POLA1P09884 1462 aaPredicted RBP31.56■■■□□ 2.64
RBM42-201ENST00000262633 SOGA1O94964 1423 aa31.43■■■□□ 2.62
RBM42-201ENST00000262633 CUX2O14529 1486 aa31.41■■■□□ 2.62
RBM42-201ENST00000262633 RAD54L2Q9Y4B4 1467 aa31.4■■■□□ 2.62
RBM42-201ENST00000262633 ABCA10Q8WWZ4 1543 aa31.36■■■□□ 2.61
RBM42-201ENST00000262633 IFT140Q96RY7 1462 aa31.35■■■□□ 2.61
RBM42-201ENST00000262633 TARBP1Q13395 1621 aaKnown RBP31.34■■■□□ 2.61
RBM42-201ENST00000262633 WDR97A6NE52 1622 aa31.29■■■□□ 2.6
RBM42-201ENST00000262633 EEA1Q15075 1411 aa31.27■■■□□ 2.6
RBM42-201ENST00000262633 KIF27Q86VH2 1401 aa31.26■■■□□ 2.59
RBM42-201ENST00000262633 RUSC2Q8N2Y8 1516 aa31.22■■■□□ 2.59
RBM42-201ENST00000262633 TDRD9Q8NDG6 1382 aaKnown RBP31.15■■■□□ 2.58
RBM42-201ENST00000262633 ABCA5Q8WWZ7 1642 aa31.15■■■□□ 2.58
RBM42-201ENST00000262633 FAM9AQ8IZU1 332 aaPredicted RBP31.14■■■□□ 2.58
RBM42-201ENST00000262633 ZNF608Q9ULD9 1512 aaPredicted RBP31.12■■■□□ 2.57
RBM42-201ENST00000262633 GAPVD1Q14C86 1478 aa31.1■■■□□ 2.57
RBM42-201ENST00000262633 AQRO60306 1485 aaKnown RBP eCLIP31.06■■■□□ 2.562e-6■■■□□ 18.2
RBM42-201ENST00000262633 CSRNP3Q8WYN3 585 aa31.06■■■□□ 2.56
RBM42-201ENST00000262633 EIF4G3O43432 1585 aaKnown RBP31.05■■■□□ 2.56
RBM42-201ENST00000262633 IGF1RP08069 1367 aa31.01■■■□□ 2.55
RBM42-201ENST00000262633 ERICH3Q5RHP9 1530 aa31■■■□□ 2.55
RBM42-201ENST00000262633 GRIN2BQ13224 1484 aa30.97■■■□□ 2.55
RBM42-201ENST00000262633 PBRM1Q86U86 1689 aa30.94■■■□□ 2.54
RBM42-201ENST00000262633 PRXQ9BXM0 1461 aa30.89■■■□□ 2.54
RBM42-201ENST00000262633 CUL7Q14999 1698 aa30.88■■■□□ 2.53
RBM42-201ENST00000262633 KIF21BO75037 1637 aa30.86■■■□□ 2.53
RBM42-201ENST00000262633 CARMIL1Q5VZK9 1371 aa30.85■■■□□ 2.53
RBM42-201ENST00000262633 SNAPC4Q5SXM2 1469 aa30.81■■■□□ 2.52
RBM42-201ENST00000262633 MAGI1Q96QZ7 1491 aaPredicted RBP30.81■■■□□ 2.52
RBM42-201ENST00000262633 ADAMTS12P58397 1594 aa30.79■■■□□ 2.52
RBM42-201ENST00000262633 FHAD1B1AJZ9 1412 aa30.77■■■□□ 2.52
RBM42-201ENST00000262633 RAPGEF2Q9Y4G8 1499 aa30.77■■■□□ 2.52
RBM42-201ENST00000262633 GOLGA3Q08378 1498 aa30.76■■■□□ 2.51
RBM42-201ENST00000262633 LOC105371045A0A1W2PR82 267 aa30.69■■■□□ 2.5
RBM42-201ENST00000262633 SYNJ2O15056 1496 aa30.67■■■□□ 2.5
RBM42-201ENST00000262633 EHMT2Q96KQ7 1210 aa30.66■■■□□ 2.5
RBM42-201ENST00000262633 GRIN2AQ12879 1464 aa30.58■■■□□ 2.49
RBM42-201ENST00000262633 UBTFP17480 764 aaKnown RBP30.56■■■□□ 2.48
RBM42-201ENST00000262633 CHMP7Q8WUX9 453 aaPredicted RBP30.56■■■□□ 2.48
RBM42-201ENST00000262633 TNIKQ9UKE5 1360 aa30.53■■■□□ 2.48
RBM42-201ENST00000262633 FBLN2P98095 1184 aa30.49■■■□□ 2.47
RBM42-201ENST00000262633 CHD1O14646 1710 aa30.44■■■□□ 2.46
RBM42-201ENST00000262633 NUP160Q12769 1436 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms