RNA–Protein interactions for RNA: ENST00000409440.7

CERKL-205, Transcript of ceramide kinase like, humanhuman

TSL 2 BASIC

Gene CERKL, Length 2,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERKL-205ENST00000409440 NISCHQ9Y2I1 1504 aa42.41■■■■■ 4.38
CERKL-205ENST00000409440 SHROOM4Q9ULL8 1493 aa36.41■■■■□ 3.42
CERKL-205ENST00000409440 CCDC180Q9P1Z9 1646 aa35.91■■■■□ 3.34
CERKL-205ENST00000409440 ZCCHC6Q5VYS8 1495 aaKnown RBP35.91■■■■□ 3.34
CERKL-205ENST00000409440 SUPT5HO00267 1087 aaKnown RBP35.8■■■■□ 3.32
CERKL-205ENST00000409440 DCAF8L2P0C7V8 631 aa35.17■■■■□ 3.22
CERKL-205ENST00000409440 CHIC1Q5VXU3 224 aa34.89■■■■□ 3.18
CERKL-205ENST00000409440 MYO15BQ96JP2 1530 aa34.85■■■■□ 3.17
CERKL-205ENST00000409440 DCAF1Q9Y4B6 1507 aa34.74■■■■□ 3.15
CERKL-205ENST00000409440 HRCP23327 699 aa34.2■■■■□ 3.06
CERKL-205ENST00000409440 PCGF6Q9BYE7 350 aa34.06■■■■□ 3.04
CERKL-205ENST00000409440 ABCC9O60706 1549 aa33.94■■■■□ 3.02
CERKL-205ENST00000409440 LOC105371045A0A1W2PR82 267 aa33.9■■■■□ 3.02
CERKL-205ENST00000409440 SCRIBQ14160 1630 aa33.78■■■■□ 3
CERKL-205ENST00000409440 RSF1Q96T23 1441 aaPredicted RBP33.66■■■□□ 2.98
CERKL-205ENST00000409440 PPARGC1BQ86YN6 1023 aaKnown RBP33.5■■■□□ 2.95
CERKL-205ENST00000409440 RB1CC1Q8TDY2 1594 aa33.37■■■□□ 2.93
CERKL-205ENST00000409440 TRIM26Q12899 539 aaPredicted RBP33.33■■■□□ 2.93
CERKL-205ENST00000409440 TRIM41Q8WV44 630 aa33.29■■■□□ 2.92
CERKL-205ENST00000409440 NACADO15069 1562 aa33.16■■■□□ 2.9
CERKL-205ENST00000409440 CECR2Q9BXF3 1484 aa33.1■■■□□ 2.89
CERKL-205ENST00000409440 FAM9AQ8IZU1 332 aaPredicted RBP33.08■■■□□ 2.89
CERKL-205ENST00000409440 MROH2BQ7Z745 1585 aa33.01■■■□□ 2.88
CERKL-205ENST00000409440 WIZO95785 1651 aa32.86■■■□□ 2.85
CERKL-205ENST00000409440 EHMT2Q96KQ7 1210 aa32.83■■■□□ 2.85
CERKL-205ENST00000409440 ZEB1P37275 1124 aaPredicted RBP32.66■■■□□ 2.82
CERKL-205ENST00000409440 BAZ1AQ9NRL2 1556 aaPredicted RBP32.64■■■□□ 2.82
CERKL-205ENST00000409440 EIF4G1Q04637 1599 aaKnown RBP32.49■■■□□ 2.79
CERKL-205ENST00000409440 TOP2AP11388 1531 aaKnown RBP32.3■■■□□ 2.76
CERKL-205ENST00000409440 SMARCA4P51532 1647 aa32.26■■■□□ 2.75
CERKL-205ENST00000409440 ABCC8Q09428 1581 aa32.22■■■□□ 2.75
CERKL-205ENST00000409440 CCDC88BA6NC98 1476 aa32.2■■■□□ 2.75
CERKL-205ENST00000409440 UNC13AQ9UPW8 1703 aa32.17■■■□□ 2.74
CERKL-205ENST00000409440 SMARCA2P51531 1590 aa32.15■■■□□ 2.74
CERKL-205ENST00000409440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32■■■□□ 2.71
CERKL-205ENST00000409440 SOGA1O94964 1423 aa31.96■■■□□ 2.71
CERKL-205ENST00000409440 CEP162Q5TB80 1403 aa31.9■■■□□ 2.7
CERKL-205ENST00000409440 CCER1Q8TC90 406 aaPredicted RBP31.9■■■□□ 2.7
CERKL-205ENST00000409440 WRNQ14191 1432 aaPredicted RBP eCLIP31.9■■■□□ 2.7
CERKL-205ENST00000409440 TTBK1Q5TCY1 1321 aaPredicted RBP31.83■■■□□ 2.69
CERKL-205ENST00000409440 TNIKQ9UKE5 1360 aa31.81■■■□□ 2.68
CERKL-205ENST00000409440 RUSC2Q8N2Y8 1516 aa31.8■■■□□ 2.68
CERKL-205ENST00000409440 PABPN1Q86U42 306 aaKnown RBP eCLIP31.79■■■□□ 2.68
CERKL-205ENST00000409440 CSRNP3Q8WYN3 585 aa31.77■■■□□ 2.68
CERKL-205ENST00000409440 EEA1Q15075 1411 aa31.76■■■□□ 2.68
CERKL-205ENST00000409440 BICRAQ9NZM4 1560 aa31.73■■■□□ 2.67
CERKL-205ENST00000409440 UBTFP17480 764 aaKnown RBP31.7■■■□□ 2.67
CERKL-205ENST00000409440 SCAF1Q9H7N4 1312 aaKnown RBP31.66■■■□□ 2.66
CERKL-205ENST00000409440 GOLGA3Q08378 1498 aa31.6■■■□□ 2.65
CERKL-205ENST00000409440 PEG3Q9GZU2 1588 aa31.59■■■□□ 2.65
CERKL-205ENST00000409440 SYNJ1O43426 1573 aa31.47■■■□□ 2.63
CERKL-205ENST00000409440 DIEXFQ68CQ4 756 aaKnown RBP31.4■■■□□ 2.62
CERKL-205ENST00000409440 CEP164Q9UPV0 1460 aa31.39■■■□□ 2.62
CERKL-205ENST00000409440 ATAD2BQ9ULI0 1458 aa31.37■■■□□ 2.61
CERKL-205ENST00000409440 KIF21BO75037 1637 aa31.35■■■□□ 2.61
CERKL-205ENST00000409440 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
CERKL-205ENST00000409440 ACIN1Q9UKV3 1341 aaKnown RBP31.28■■■□□ 2.6
CERKL-205ENST00000409440 CLIP1P30622 1438 aa31.26■■■□□ 2.6
CERKL-205ENST00000409440 NEUROD1Q13562 356 aa31.24■■■□□ 2.59
CERKL-205ENST00000409440 PELP1Q8IZL8 1130 aaKnown RBP31.16■■■□□ 2.58
CERKL-205ENST00000409440 RAPGEF2Q9Y4G8 1499 aa31.16■■■□□ 2.58
CERKL-205ENST00000409440 HNRNPUL2Q1KMD3 747 aaKnown RBP31.15■■■□□ 2.58
CERKL-205ENST00000409440 VPS8Q8N3P4 1428 aa31.14■■■□□ 2.58
CERKL-205ENST00000409440 ZNF316A6NFI3 1004 aaPredicted RBP31.09■■■□□ 2.57
CERKL-205ENST00000409440 RANGAP1P46060 587 aaPredicted RBP31.06■■■□□ 2.56
CERKL-205ENST00000409440 CENPBP07199 599 aaPredicted RBP31.05■■■□□ 2.56
CERKL-205ENST00000409440 TOP2BQ02880 1626 aa31.04■■■□□ 2.56
CERKL-205ENST00000409440 APLP2Q06481 763 aa31.02■■■□□ 2.56
CERKL-205ENST00000409440 GTF3C3Q9Y5Q9 886 aa30.94■■■□□ 2.54
CERKL-205ENST00000409440 BIVM-ERCC5R4GMW8 1640 aa30.92■■■□□ 2.54
CERKL-205ENST00000409440 PRXQ9BXM0 1461 aa30.8■■■□□ 2.52
CERKL-205ENST00000409440 ERICH3Q5RHP9 1530 aa30.8■■■□□ 2.52
CERKL-205ENST00000409440 ARAP1Q96P48 1450 aa30.74■■■□□ 2.51
CERKL-205ENST00000409440 CUX1P39880 1505 aa30.71■■■□□ 2.51
CERKL-205ENST00000409440 MIER1Q8N108 512 aa30.71■■■□□ 2.51
CERKL-205ENST00000409440 YTHDC1Q96MU7 727 aaKnown RBP30.71■■■□□ 2.51
CERKL-205ENST00000409440 HMGXB3Q12766 1538 aa30.7■■■□□ 2.51
CERKL-205ENST00000409440 NCAPD3P42695 1498 aa30.7■■■□□ 2.5
CERKL-205ENST00000409440 KANK4Q5T7N3 995 aaPredicted RBP30.63■■■□□ 2.49
CERKL-205ENST00000409440 KIF27Q86VH2 1401 aa30.61■■■□□ 2.49
CERKL-205ENST00000409440 DHX57Q6P158 1386 aaKnown RBP30.54■■■□□ 2.48
CERKL-205ENST00000409440 CFTRP13569 1480 aa30.53■■■□□ 2.48
CERKL-205ENST00000409440 CLSPNQ9HAW4 1339 aa30.5■■■□□ 2.47
CERKL-205ENST00000409440 RRBP1Q9P2E9 1410 aaKnown RBP30.45■■■□□ 2.46
CERKL-205ENST00000409440 ARHGAP35Q9NRY4 1499 aa30.43■■■□□ 2.46
CERKL-205ENST00000409440 CCNB3Q8WWL7 1395 aa30.32■■■□□ 2.45
CERKL-205ENST00000409440 PRDM2Q13029 1718 aa30.29■■■□□ 2.44
CERKL-205ENST00000409440 CUX2O14529 1486 aa30.29■■■□□ 2.44
CERKL-205ENST00000409440 IGF1RP08069 1367 aa30.27■■■□□ 2.44
CERKL-205ENST00000409440 ITGAEP38570 1179 aa30.25■■■□□ 2.43
CERKL-205ENST00000409440 CARMIL1Q5VZK9 1371 aa30.15■■■□□ 2.42
CERKL-205ENST00000409440 CADPSQ9ULU8 1353 aa30.15■■■□□ 2.42
CERKL-205ENST00000409440 TIAM1Q13009 1591 aa30.13■■■□□ 2.41
CERKL-205ENST00000409440 FGD5Q6ZNL6 1462 aa30.13■■■□□ 2.41
CERKL-205ENST00000409440 RAB3GAP2Q9H2M9 1393 aa30.09■■■□□ 2.41
CERKL-205ENST00000409440 MAP3K1Q13233 1512 aa30.07■■■□□ 2.4
CERKL-205ENST00000409440 LRRC9Q6ZRR7 1453 aa30.02■■■□□ 2.4
CERKL-205ENST00000409440 MAPKBP1O60336 1514 aa30■■■□□ 2.39
CERKL-205ENST00000409440 PHLDB1Q86UU1 1377 aa29.98■■■□□ 2.39
CERKL-205ENST00000409440 SETD5Q9C0A6 1442 aa29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms