RNA–Protein interactions for RNA: ENST00000409659.5

LRPPRC-202, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 5 BASIC

Gene LRPPRC, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-202ENST00000409659 NISCHQ9Y2I1 1504 aa43.91■■■■■ 4.62
LRPPRC-202ENST00000409659 CCDC180Q9P1Z9 1646 aa38.5■■■■□ 3.75
LRPPRC-202ENST00000409659 ZCCHC6Q5VYS8 1495 aaKnown RBP36.82■■■■□ 3.48
LRPPRC-202ENST00000409659 ABCC9O60706 1549 aa36.74■■■■□ 3.47
LRPPRC-202ENST00000409659 DCAF1Q9Y4B6 1507 aa36.35■■■■□ 3.41
LRPPRC-202ENST00000409659 DCAF8L2P0C7V8 631 aa36.19■■■■□ 3.38
LRPPRC-202ENST00000409659 MYO15BQ96JP2 1530 aa36.1■■■■□ 3.37
LRPPRC-202ENST00000409659 NACADO15069 1562 aa35.95■■■■□ 3.35
LRPPRC-202ENST00000409659 RB1CC1Q8TDY2 1594 aa35.72■■■■□ 3.31
LRPPRC-202ENST00000409659 SHROOM4Q9ULL8 1493 aa35.42■■■■□ 3.26
LRPPRC-202ENST00000409659 SCRIBQ14160 1630 aa35.28■■■■□ 3.24
LRPPRC-202ENST00000409659 UNC13AQ9UPW8 1703 aa35.01■■■■□ 3.2
LRPPRC-202ENST00000409659 BICRAQ9NZM4 1560 aa34.74■■■■□ 3.15
LRPPRC-202ENST00000409659 PABPN1Q86U42 306 aaKnown RBP eCLIP34.53■■■■□ 3.12
LRPPRC-202ENST00000409659 SUPT5HO00267 1087 aaKnown RBP34.17■■■■□ 3.06
LRPPRC-202ENST00000409659 CECR2Q9BXF3 1484 aa34.16■■■■□ 3.06
LRPPRC-202ENST00000409659 BAZ1AQ9NRL2 1556 aaPredicted RBP33.91■■■■□ 3.02
LRPPRC-202ENST00000409659 MROH2BQ7Z745 1585 aa33.91■■■■□ 3.02
LRPPRC-202ENST00000409659 RSF1Q96T23 1441 aaPredicted RBP33.89■■■■□ 3.02
LRPPRC-202ENST00000409659 SMARCA4P51532 1647 aa33.84■■■■□ 3.01
LRPPRC-202ENST00000409659 EIF4G1Q04637 1599 aaKnown RBP33.68■■■□□ 2.98
LRPPRC-202ENST00000409659 WIZO95785 1651 aa33.57■■■□□ 2.96
LRPPRC-202ENST00000409659 PEG3Q9GZU2 1588 aa33.5■■■□□ 2.95
LRPPRC-202ENST00000409659 ATAD2BQ9ULI0 1458 aa33.41■■■□□ 2.94
LRPPRC-202ENST00000409659 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
LRPPRC-202ENST00000409659 CC2D2AQ9P2K1 1620 aa33.27■■■□□ 2.92
LRPPRC-202ENST00000409659 TOP2AP11388 1531 aaKnown RBP33.24■■■□□ 2.91
LRPPRC-202ENST00000409659 NCAPD3P42695 1498 aa33.21■■■□□ 2.91
LRPPRC-202ENST00000409659 BAZ1BQ9UIG0 1483 aaKnown RBP33.14■■■□□ 2.9
LRPPRC-202ENST00000409659 HMGXB3Q12766 1538 aa33.13■■■□□ 2.89
LRPPRC-202ENST00000409659 CHIC1Q5VXU3 224 aa32.96■■■□□ 2.87
LRPPRC-202ENST00000409659 CCDC88BA6NC98 1476 aa32.88■■■□□ 2.85
LRPPRC-202ENST00000409659 DNAJC5BQ9UF47 199 aa32.87■■■□□ 2.85
LRPPRC-202ENST00000409659 CFTRP13569 1480 aa32.34■■■□□ 2.77
LRPPRC-202ENST00000409659 CADPSQ9ULU8 1353 aa32.29■■■□□ 2.76
LRPPRC-202ENST00000409659 TRIM41Q8WV44 630 aa32.18■■■□□ 2.74
LRPPRC-202ENST00000409659 NESP48681 1621 aa32.15■■■□□ 2.74
LRPPRC-202ENST00000409659 LAMC3Q9Y6N6 1575 aa32.12■■■□□ 2.73
LRPPRC-202ENST00000409659 PRDM2Q13029 1718 aa32.11■■■□□ 2.73
LRPPRC-202ENST00000409659 ABCC8Q09428 1581 aa32.03■■■□□ 2.72
LRPPRC-202ENST00000409659 FANCD2Q9BXW9 1451 aa31.92■■■□□ 2.7
LRPPRC-202ENST00000409659 WRNQ14191 1432 aaPredicted RBP eCLIP31.87■■■□□ 2.69
LRPPRC-202ENST00000409659 PDS5BQ9NTI5 1447 aa31.84■■■□□ 2.69
LRPPRC-202ENST00000409659 SYNJ1O43426 1573 aa31.8■■■□□ 2.68
LRPPRC-202ENST00000409659 KIF21AQ7Z4S6 1674 aa31.75■■■□□ 2.67
LRPPRC-202ENST00000409659 CEP164Q9UPV0 1460 aa31.75■■■□□ 2.67
LRPPRC-202ENST00000409659 CUX1P39880 1505 aa31.74■■■□□ 2.67
LRPPRC-202ENST00000409659 TOP2BQ02880 1626 aa31.7■■■□□ 2.66
LRPPRC-202ENST00000409659 BIVM-ERCC5R4GMW8 1640 aa31.67■■■□□ 2.66
LRPPRC-202ENST00000409659 LOC105371045A0A1W2PR82 267 aa31.61■■■□□ 2.65
LRPPRC-202ENST00000409659 URB2Q14146 1524 aaKnown RBP31.59■■■□□ 2.65
LRPPRC-202ENST00000409659 DNMBPQ6XZF7 1577 aa31.57■■■□□ 2.64
LRPPRC-202ENST00000409659 EEA1Q15075 1411 aa31.56■■■□□ 2.64
LRPPRC-202ENST00000409659 TOPBP1Q92547 1522 aa31.55■■■□□ 2.64
LRPPRC-202ENST00000409659 ERCC6Q03468 1493 aa31.5■■■□□ 2.63
LRPPRC-202ENST00000409659 FAM9AQ8IZU1 332 aaPredicted RBP31.49■■■□□ 2.63
LRPPRC-202ENST00000409659 MRC2Q9UBG0 1479 aa31.49■■■□□ 2.63
LRPPRC-202ENST00000409659 FGD5Q6ZNL6 1462 aa31.43■■■□□ 2.62
LRPPRC-202ENST00000409659 SOGA1O94964 1423 aa31.42■■■□□ 2.62
LRPPRC-202ENST00000409659 THOC2Q8NI27 1593 aaKnown RBP31.4■■■□□ 2.62
LRPPRC-202ENST00000409659 WDR62O43379 1518 aa31.39■■■□□ 2.62
LRPPRC-202ENST00000409659 POLA1P09884 1462 aaPredicted RBP31.37■■■□□ 2.61
LRPPRC-202ENST00000409659 RUSC2Q8N2Y8 1516 aa31.3■■■□□ 2.6
LRPPRC-202ENST00000409659 RAD54L2Q9Y4B4 1467 aa31.24■■■□□ 2.59
LRPPRC-202ENST00000409659 KIF21BO75037 1637 aa31.2■■■□□ 2.59
LRPPRC-202ENST00000409659 CUX2O14529 1486 aa31.19■■■□□ 2.58
LRPPRC-202ENST00000409659 CSRNP3Q8WYN3 585 aa31.17■■■□□ 2.58
LRPPRC-202ENST00000409659 ABCA10Q8WWZ4 1543 aa31.17■■■□□ 2.58
LRPPRC-202ENST00000409659 TARBP1Q13395 1621 aaKnown RBP31.14■■■□□ 2.58
LRPPRC-202ENST00000409659 WDR97A6NE52 1622 aa31.13■■■□□ 2.57
LRPPRC-202ENST00000409659 GOLGA3Q08378 1498 aa31.1■■■□□ 2.57
LRPPRC-202ENST00000409659 KIF27Q86VH2 1401 aa31.08■■■□□ 2.57
LRPPRC-202ENST00000409659 IFT140Q96RY7 1462 aa31.03■■■□□ 2.56
LRPPRC-202ENST00000409659 TNIKQ9UKE5 1360 aa31.02■■■□□ 2.56
LRPPRC-202ENST00000409659 ABCA5Q8WWZ7 1642 aa30.97■■■□□ 2.55
LRPPRC-202ENST00000409659 EHMT2Q96KQ7 1210 aa30.95■■■□□ 2.55
LRPPRC-202ENST00000409659 TDRD9Q8NDG6 1382 aaKnown RBP30.94■■■□□ 2.54
LRPPRC-202ENST00000409659 ERICH3Q5RHP9 1530 aa30.92■■■□□ 2.54
LRPPRC-202ENST00000409659 ZNF608Q9ULD9 1512 aaPredicted RBP30.9■■■□□ 2.54
LRPPRC-202ENST00000409659 IGF1RP08069 1367 aa30.9■■■□□ 2.54
LRPPRC-202ENST00000409659 GAPVD1Q14C86 1478 aa30.87■■■□□ 2.53
LRPPRC-202ENST00000409659 CEP162Q5TB80 1403 aa30.87■■■□□ 2.53
LRPPRC-202ENST00000409659 PRXQ9BXM0 1461 aa30.87■■■□□ 2.53
LRPPRC-202ENST00000409659 AQRO60306 1485 aaKnown RBP eCLIP30.84■■■□□ 2.539e-8■■■■■ 30
LRPPRC-202ENST00000409659 RAPGEF2Q9Y4G8 1499 aa30.82■■■□□ 2.52
LRPPRC-202ENST00000409659 EIF4G3O43432 1585 aaKnown RBP30.78■■■□□ 2.52
LRPPRC-202ENST00000409659 UBTFP17480 764 aaKnown RBP30.73■■■□□ 2.51
LRPPRC-202ENST00000409659 PBRM1Q86U86 1689 aa30.72■■■□□ 2.51
LRPPRC-202ENST00000409659 GRIN2BQ13224 1484 aa30.7■■■□□ 2.51
LRPPRC-202ENST00000409659 CARMIL1Q5VZK9 1371 aa30.7■■■□□ 2.5
LRPPRC-202ENST00000409659 CUL7Q14999 1698 aa30.67■■■□□ 2.5
LRPPRC-202ENST00000409659 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
LRPPRC-202ENST00000409659 SNAPC4Q5SXM2 1469 aa30.55■■■□□ 2.48
LRPPRC-202ENST00000409659 CLIP1P30622 1438 aa30.55■■■□□ 2.48
LRPPRC-202ENST00000409659 FHAD1B1AJZ9 1412 aa30.54■■■□□ 2.48
LRPPRC-202ENST00000409659 MAGI1Q96QZ7 1491 aaPredicted RBP30.51■■■□□ 2.47
LRPPRC-202ENST00000409659 TRIM26Q12899 539 aaPredicted RBP30.5■■■□□ 2.47
LRPPRC-202ENST00000409659 PCGF6Q9BYE7 350 aa30.47■■■□□ 2.47
LRPPRC-202ENST00000409659 SYNJ2O15056 1496 aa30.39■■■□□ 2.46
LRPPRC-202ENST00000409659 VPS8Q8N3P4 1428 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms