RNA–Protein interactions for RNA: ENST00000483039.5

TNFSF13-208, Transcript of TNF superfamily member 13, humanhuman

TSL 2 BASIC

Gene TNFSF13, Length 959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-208ENST00000483039 NISCHQ9Y2I1 1504 aa46.1■■■■■ 4.97
TNFSF13-208ENST00000483039 ABCC9O60706 1549 aa42.28■■■■■ 4.36
TNFSF13-208ENST00000483039 CCDC180Q9P1Z9 1646 aa41.67■■■■■ 4.26
TNFSF13-208ENST00000483039 DNAJC5BQ9UF47 199 aa40.27■■■■■ 4.04
TNFSF13-208ENST00000483039 RB1CC1Q8TDY2 1594 aa39.99■■■■□ 3.99
TNFSF13-208ENST00000483039 NACADO15069 1562 aa39.56■■■■□ 3.92
TNFSF13-208ENST00000483039 PABPN1Q86U42 306 aaKnown RBP eCLIP39.25■■■■□ 3.87
TNFSF13-208ENST00000483039 DCAF8L2P0C7V8 631 aa39.16■■■■□ 3.86
TNFSF13-208ENST00000483039 UNC13AQ9UPW8 1703 aa39.06■■■■□ 3.84
TNFSF13-208ENST00000483039 BICRAQ9NZM4 1560 aa38.83■■■■□ 3.81
TNFSF13-208ENST00000483039 MYO15BQ96JP2 1530 aa38.83■■■■□ 3.81
TNFSF13-208ENST00000483039 SHROOM4Q9ULL8 1493 aa38.29■■■■□ 3.72
TNFSF13-208ENST00000483039 CECR2Q9BXF3 1484 aa38.18■■■■□ 3.7
TNFSF13-208ENST00000483039 CC2D2AQ9P2K1 1620 aa38.18■■■■□ 3.7
TNFSF13-208ENST00000483039 DCAF1Q9Y4B6 1507 aa38.07■■■■□ 3.68
TNFSF13-208ENST00000483039 ZCCHC6Q5VYS8 1495 aaKnown RBP38.05■■■■□ 3.68
TNFSF13-208ENST00000483039 EIF4G1Q04637 1599 aaKnown RBP37.93■■■■□ 3.66
TNFSF13-208ENST00000483039 SCRIBQ14160 1630 aa37.87■■■■□ 3.65
TNFSF13-208ENST00000483039 DNAJC5Q9H3Z4 198 aa37.51■■■■□ 3.6
TNFSF13-208ENST00000483039 CUX2O14529 1486 aa36.76■■■■□ 3.48
TNFSF13-208ENST00000483039 ERCC6Q03468 1493 aa36.56■■■■□ 3.44
TNFSF13-208ENST00000483039 NCAPD3P42695 1498 aa36.54■■■■□ 3.44
TNFSF13-208ENST00000483039 ATAD2BQ9ULI0 1458 aa36.31■■■■□ 3.4
TNFSF13-208ENST00000483039 HMGXB3Q12766 1538 aa36.19■■■■□ 3.38
TNFSF13-208ENST00000483039 SMARCA2P51531 1590 aa36.18■■■■□ 3.38
TNFSF13-208ENST00000483039 NESP48681 1621 aa36.12■■■■□ 3.37
TNFSF13-208ENST00000483039 SMARCA4P51532 1647 aa36.09■■■■□ 3.37
TNFSF13-208ENST00000483039 THOC2Q8NI27 1593 aaKnown RBP35.92■■■■□ 3.34
TNFSF13-208ENST00000483039 BAZ1BQ9UIG0 1483 aaKnown RBP35.92■■■■□ 3.34
TNFSF13-208ENST00000483039 BAZ1AQ9NRL2 1556 aaPredicted RBP35.84■■■■□ 3.33
TNFSF13-208ENST00000483039 LAMC3Q9Y6N6 1575 aa35.81■■■■□ 3.32
TNFSF13-208ENST00000483039 PEG3Q9GZU2 1588 aa35.78■■■■□ 3.32
TNFSF13-208ENST00000483039 KIF21AQ7Z4S6 1674 aa35.65■■■■□ 3.3
TNFSF13-208ENST00000483039 PDS5BQ9NTI5 1447 aa35.63■■■■□ 3.29
TNFSF13-208ENST00000483039 TRIM41Q8WV44 630 aa35.53■■■■□ 3.28
TNFSF13-208ENST00000483039 MROH2BQ7Z745 1585 aa35.49■■■■□ 3.27
TNFSF13-208ENST00000483039 CADPSQ9ULU8 1353 aa35.38■■■■□ 3.26
TNFSF13-208ENST00000483039 MRC2Q9UBG0 1479 aa35.35■■■■□ 3.25
TNFSF13-208ENST00000483039 WDR62O43379 1518 aa35.28■■■■□ 3.24
TNFSF13-208ENST00000483039 CEP164Q9UPV0 1460 aa35.07■■■■□ 3.2
TNFSF13-208ENST00000483039 WIZO95785 1651 aa35.03■■■■□ 3.2
TNFSF13-208ENST00000483039 FANCD2Q9BXW9 1451 aa34.97■■■■□ 3.19
TNFSF13-208ENST00000483039 OSCARQ8IYS5 282 aa34.97■■■■□ 3.19
TNFSF13-208ENST00000483039 CFTRP13569 1480 aa34.84■■■■□ 3.17
TNFSF13-208ENST00000483039 URB2Q14146 1524 aaKnown RBP34.71■■■■□ 3.15
TNFSF13-208ENST00000483039 RIMBP3CA6NJZ7 1639 aa34.56■■■■□ 3.12
TNFSF13-208ENST00000483039 RIMBP3BA6NNM3 1639 aa34.56■■■■□ 3.12
TNFSF13-208ENST00000483039 RIMBP3Q9UFD9 1639 aa34.56■■■■□ 3.12
TNFSF13-208ENST00000483039 TOP2AP11388 1531 aaKnown RBP34.55■■■■□ 3.12
TNFSF13-208ENST00000483039 RSF1Q96T23 1441 aaPredicted RBP34.52■■■■□ 3.12
TNFSF13-208ENST00000483039 PRDM2Q13029 1718 aa34.44■■■■□ 3.1
TNFSF13-208ENST00000483039 IFT140Q96RY7 1462 aa34.4■■■■□ 3.1
TNFSF13-208ENST00000483039 ARHGEF11O15085 1522 aa34.4■■■■□ 3.1
TNFSF13-208ENST00000483039 ZNF608Q9ULD9 1512 aaPredicted RBP34.39■■■■□ 3.1
TNFSF13-208ENST00000483039 TOPBP1Q92547 1522 aa34.24■■■■□ 3.07
TNFSF13-208ENST00000483039 CYB5RLQ6IPT4 315 aa34.18■■■■□ 3.06
TNFSF13-208ENST00000483039 CCDC88BA6NC98 1476 aa34.17■■■■□ 3.06
TNFSF13-208ENST00000483039 EIF4G3O43432 1585 aaKnown RBP34.17■■■■□ 3.06
TNFSF13-208ENST00000483039 ABCC8Q09428 1581 aa34.15■■■■□ 3.06
TNFSF13-208ENST00000483039 DNMBPQ6XZF7 1577 aa34.05■■■■□ 3.04
TNFSF13-208ENST00000483039 CHD1O14646 1710 aa34.04■■■■□ 3.04
TNFSF13-208ENST00000483039 TRHP20396 242 aaPredicted RBP34.01■■■■□ 3.03
TNFSF13-208ENST00000483039 AQRO60306 1485 aaKnown RBP eCLIP34■■■■□ 3.03
TNFSF13-208ENST00000483039 ARAP1Q96P48 1450 aa34■■■■□ 3.03
TNFSF13-208ENST00000483039 TARBP1Q13395 1621 aaKnown RBP33.98■■■■□ 3.03
TNFSF13-208ENST00000483039 FBLN2P98095 1184 aa33.9■■■■□ 3.02
TNFSF13-208ENST00000483039 POLA1P09884 1462 aaPredicted RBP33.83■■■■□ 3.01
TNFSF13-208ENST00000483039 RAD54L2Q9Y4B4 1467 aa33.71■■■□□ 2.99
TNFSF13-208ENST00000483039 TDRD9Q8NDG6 1382 aaKnown RBP33.69■■■□□ 2.98
TNFSF13-208ENST00000483039 SOGA1O94964 1423 aa33.69■■■□□ 2.98
TNFSF13-208ENST00000483039 CLASP1Q7Z460 1538 aa33.65■■■□□ 2.98
TNFSF13-208ENST00000483039 SNAPC4Q5SXM2 1469 aa33.63■■■□□ 2.97
TNFSF13-208ENST00000483039 WDR97A6NE52 1622 aa33.62■■■□□ 2.97
TNFSF13-208ENST00000483039 SYNJ1O43426 1573 aa33.58■■■□□ 2.97
TNFSF13-208ENST00000483039 CHMP7Q8WUX9 453 aaPredicted RBP33.57■■■□□ 2.96
TNFSF13-208ENST00000483039 MAGI1Q96QZ7 1491 aaPredicted RBP33.55■■■□□ 2.96
TNFSF13-208ENST00000483039 AEBP2Q6ZN18 517 aaPredicted RBP33.53■■■□□ 2.96
TNFSF13-208ENST00000483039 FGD5Q6ZNL6 1462 aa33.52■■■□□ 2.96
TNFSF13-208ENST00000483039 GRIN2BQ13224 1484 aa33.47■■■□□ 2.95
TNFSF13-208ENST00000483039 SYNJ2O15056 1496 aa33.44■■■□□ 2.94
TNFSF13-208ENST00000483039 CUX1P39880 1505 aa33.38■■■□□ 2.93
TNFSF13-208ENST00000483039 GAPVD1Q14C86 1478 aa33.34■■■□□ 2.93
TNFSF13-208ENST00000483039 PBRM1Q86U86 1689 aa33.27■■■□□ 2.92
TNFSF13-208ENST00000483039 ABCA5Q8WWZ7 1642 aa33.13■■■□□ 2.89
TNFSF13-208ENST00000483039 ABCA10Q8WWZ4 1543 aa33.12■■■□□ 2.89
TNFSF13-208ENST00000483039 ERCC6L2Q5T890 1561 aa33.05■■■□□ 2.88
TNFSF13-208ENST00000483039 GRIN2AQ12879 1464 aa33.03■■■□□ 2.88
TNFSF13-208ENST00000483039 CEP170Q5SW79 1584 aa32.96■■■□□ 2.87
TNFSF13-208ENST00000483039 NUP160Q12769 1436 aa32.95■■■□□ 2.87
TNFSF13-208ENST00000483039 ADAMTS12P58397 1594 aa32.92■■■□□ 2.86
TNFSF13-208ENST00000483039 SHROOM2Q13796 1616 aa32.88■■■□□ 2.85
TNFSF13-208ENST00000483039 WRNQ14191 1432 aaPredicted RBP eCLIP32.86■■■□□ 2.85
TNFSF13-208ENST00000483039 FHAD1B1AJZ9 1412 aa32.82■■■□□ 2.84
TNFSF13-208ENST00000483039 KIF13AQ9H1H9 1805 aa32.81■■■□□ 2.84
TNFSF13-208ENST00000483039 ERICH3Q5RHP9 1530 aa32.7■■■□□ 2.83
TNFSF13-208ENST00000483039 BIVM-ERCC5R4GMW8 1640 aa32.69■■■□□ 2.82
TNFSF13-208ENST00000483039 PRG4Q92954 1404 aaPredicted RBP32.68■■■□□ 2.82
TNFSF13-208ENST00000483039 TOP2BQ02880 1626 aa32.68■■■□□ 2.82
TNFSF13-208ENST00000483039 JPH4Q96JJ6 628 aa32.62■■■□□ 2.81
TNFSF13-208ENST00000483039 ABCC10Q5T3U5 1492 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms