RNA–Protein interactions for RNA: ENST00000437294.1

AP000347.1-209, human

TSL 4 BASIC

Gene AP000347.1, Length 557 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AP000347.1-209	ENST00000437294	NISCH	Q9Y2I1	1504 aa		45.46	■■■■■ 4.87
AP000347.1-209	ENST00000437294	CCDC180	Q9P1Z9	1646 aa		40.78	■■■■■ 4.12
AP000347.1-209	ENST00000437294	ABCC9	O60706	1549 aa		40.51	■■■■■ 4.08
AP000347.1-209	ENST00000437294	RB1CC1	Q8TDY2	1594 aa		38.7	■■■■□ 3.79
AP000347.1-209	ENST00000437294	NACAD	O15069	1562 aa		38.49	■■■■□ 3.75
AP000347.1-209	ENST00000437294	DCAF8L2	P0C7V8	631 aa		38.15	■■■■□ 3.7
AP000347.1-209	ENST00000437294	MYO15B	Q96JP2	1530 aa		38.07	■■■■□ 3.68
AP000347.1-209	ENST00000437294	DNAJC5B	Q9UF47	199 aa		37.86	■■■■□ 3.65
AP000347.1-209	ENST00000437294	UNC13A	Q9UPW8	1703 aa		37.84	■■■■□ 3.65
AP000347.1-209	ENST00000437294	ZCCHC6	Q5VYS8	1495 aa	Known RBP	37.71	■■■■□ 3.63
AP000347.1-209	ENST00000437294	PABPN1	Q86U42	306 aa	Known RBP eCLIP	37.7	■■■■□ 3.63
AP000347.1-209	ENST00000437294	DCAF1	Q9Y4B6	1507 aa		37.62	■■■■□ 3.61
AP000347.1-209	ENST00000437294	BICRA	Q9NZM4	1560 aa		37.56	■■■■□ 3.6
AP000347.1-209	ENST00000437294	SHROOM4	Q9ULL8	1493 aa		37.15	■■■■□ 3.54
AP000347.1-209	ENST00000437294	SCRIB	Q14160	1630 aa		37.07	■■■■□ 3.52
AP000347.1-209	ENST00000437294	CC2D2A	Q9P2K1	1620 aa		36.65	■■■■□ 3.46
AP000347.1-209	ENST00000437294	EIF4G1	Q04637	1599 aa	Known RBP	36.62	■■■■□ 3.45
AP000347.1-209	ENST00000437294	CECR2	Q9BXF3	1484 aa		36.5	■■■■□ 3.43
AP000347.1-209	ENST00000437294	NCAPD3	P42695	1498 aa		35.53	■■■■□ 3.28
AP000347.1-209	ENST00000437294	SMARCA4	P51532	1647 aa		35.43	■■■■□ 3.26
AP000347.1-209	ENST00000437294	ATAD2B	Q9ULI0	1458 aa		35.41	■■■■□ 3.26
AP000347.1-209	ENST00000437294	SMARCA2	P51531	1590 aa		35.34	■■■■□ 3.25
AP000347.1-209	ENST00000437294	HMGXB3	Q12766	1538 aa		35.29	■■■■□ 3.24
AP000347.1-209	ENST00000437294	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	35.28	■■■■□ 3.24
AP000347.1-209	ENST00000437294	PEG3	Q9GZU2	1588 aa		35.13	■■■■□ 3.21
AP000347.1-209	ENST00000437294	BAZ1B	Q9UIG0	1483 aa	Known RBP	35.06	■■■■□ 3.2
AP000347.1-209	ENST00000437294	MROH2B	Q7Z745	1585 aa		34.99	■■■■□ 3.19
AP000347.1-209	ENST00000437294	ERCC6	Q03468	1493 aa		34.97	■■■■□ 3.19
AP000347.1-209	ENST00000437294	CUX2	O14529	1486 aa		34.93	■■■■□ 3.18
AP000347.1-209	ENST00000437294	NES	P48681	1621 aa		34.84	■■■■□ 3.17
AP000347.1-209	ENST00000437294	LAMC3	Q9Y6N6	1575 aa		34.7	■■■■□ 3.15
AP000347.1-209	ENST00000437294	DNAJC5	Q9H3Z4	198 aa		34.7	■■■■□ 3.15
AP000347.1-209	ENST00000437294	WIZ	O95785	1651 aa		34.58	■■■■□ 3.13
AP000347.1-209	ENST00000437294	THOC2	Q8NI27	1593 aa	Known RBP	34.53	■■■■□ 3.12
AP000347.1-209	ENST00000437294	PDS5B	Q9NTI5	1447 aa		34.47	■■■■□ 3.11
AP000347.1-209	ENST00000437294	KIF21A	Q7Z4S6	1674 aa		34.44	■■■■□ 3.1
AP000347.1-209	ENST00000437294	CADPS	Q9ULU8	1353 aa		34.43	■■■■□ 3.1
AP000347.1-209	ENST00000437294	RSF1	Q96T23	1441 aa	Predicted RBP	34.32	■■■■□ 3.08
AP000347.1-209	ENST00000437294	TOP2A	P11388	1531 aa	Known RBP	34.19	■■■■□ 3.06
AP000347.1-209	ENST00000437294	MRC2	Q9UBG0	1479 aa		34.16	■■■■□ 3.06
AP000347.1-209	ENST00000437294	WDR62	O43379	1518 aa		34.1	■■■■□ 3.05
AP000347.1-209	ENST00000437294	CFTR	P13569	1480 aa		34.08	■■■■□ 3.05
AP000347.1-209	ENST00000437294	CEP164	Q9UPV0	1460 aa		34.05	■■■■□ 3.04
AP000347.1-209	ENST00000437294	FANCD2	Q9BXW9	1451 aa		34.02	■■■■□ 3.04
AP000347.1-209	ENST00000437294	PRDM2	Q13029	1718 aa		33.8	■■■■□ 3
AP000347.1-209	ENST00000437294	CCDC88B	A6NC98	1476 aa		33.77	■■■■□ 3
AP000347.1-209	ENST00000437294	URB2	Q14146	1524 aa	Known RBP	33.74	■■■□□ 2.99
AP000347.1-209	ENST00000437294	TOPBP1	Q92547	1522 aa		33.4	■■■□□ 2.94
AP000347.1-209	ENST00000437294	ABCC8	Q09428	1581 aa		33.38	■■■□□ 2.93
AP000347.1-209	ENST00000437294	IFT140	Q96RY7	1462 aa		33.38	■■■□□ 2.93
AP000347.1-209	ENST00000437294	DNMBP	Q6XZF7	1577 aa		33.31	■■■□□ 2.92
AP000347.1-209	ENST00000437294	OSCAR	Q8IYS5	282 aa		33.31	■■■□□ 2.92
AP000347.1-209	ENST00000437294	ZNF608	Q9ULD9	1512 aa	Predicted RBP	33.27	■■■□□ 2.92
AP000347.1-209	ENST00000437294	TRIM41	Q8WV44	630 aa		33.14	■■■□□ 2.9
AP000347.1-209	ENST00000437294	EIF4G3	O43432	1585 aa	Known RBP	33.13	■■■□□ 2.89
AP000347.1-209	ENST00000437294	TARBP1	Q13395	1621 aa	Known RBP	33.12	■■■□□ 2.89
AP000347.1-209	ENST00000437294	POLA1	P09884	1462 aa	Predicted RBP	33.07	■■■□□ 2.88
AP000347.1-209	ENST00000437294	AQR	O60306	1485 aa	Known RBP eCLIP	32.98	■■■□□ 2.87
AP000347.1-209	ENST00000437294	SOGA1	O94964	1423 aa		32.91	■■■□□ 2.86
AP000347.1-209	ENST00000437294	RAD54L2	Q9Y4B4	1467 aa		32.91	■■■□□ 2.86
AP000347.1-209	ENST00000437294	RIMBP3C	A6NJZ7	1639 aa		32.88	■■■□□ 2.85
AP000347.1-209	ENST00000437294	RIMBP3B	A6NNM3	1639 aa		32.88	■■■□□ 2.85
AP000347.1-209	ENST00000437294	RIMBP3	Q9UFD9	1639 aa		32.88	■■■□□ 2.85
AP000347.1-209	ENST00000437294	CUX1	P39880	1505 aa		32.87	■■■□□ 2.85
AP000347.1-209	ENST00000437294	FGD5	Q6ZNL6	1462 aa		32.87	■■■□□ 2.85
AP000347.1-209	ENST00000437294	WDR97	A6NE52	1622 aa		32.85	■■■□□ 2.85
AP000347.1-209	ENST00000437294	CHD1	O14646	1710 aa		32.85	■■■□□ 2.85
AP000347.1-209	ENST00000437294	SUPT5H	O00267	1087 aa	Known RBP	32.81	■■■□□ 2.84
AP000347.1-209	ENST00000437294	ARHGEF11	O15085	1522 aa		32.79	■■■□□ 2.84
AP000347.1-209	ENST00000437294	TDRD9	Q8NDG6	1382 aa	Known RBP	32.79	■■■□□ 2.84
AP000347.1-209	ENST00000437294	FBLN2	P98095	1184 aa		32.67	■■■□□ 2.82
AP000347.1-209	ENST00000437294	SNAPC4	Q5SXM2	1469 aa		32.67	■■■□□ 2.82
AP000347.1-209	ENST00000437294	MAGI1	Q96QZ7	1491 aa	Predicted RBP	32.63	■■■□□ 2.81
AP000347.1-209	ENST00000437294	GRIN2B	Q13224	1484 aa		32.62	■■■□□ 2.81
AP000347.1-209	ENST00000437294	ABCA10	Q8WWZ4	1543 aa		32.55	■■■□□ 2.8
AP000347.1-209	ENST00000437294	GAPVD1	Q14C86	1478 aa		32.52	■■■□□ 2.8
AP000347.1-209	ENST00000437294	PBRM1	Q86U86	1689 aa		32.52	■■■□□ 2.8
AP000347.1-209	ENST00000437294	SYNJ2	O15056	1496 aa		32.51	■■■□□ 2.79
AP000347.1-209	ENST00000437294	CHMP7	Q8WUX9	453 aa	Predicted RBP	32.51	■■■□□ 2.79
AP000347.1-209	ENST00000437294	CLASP1	Q7Z460	1538 aa		32.51	■■■□□ 2.79
AP000347.1-209	ENST00000437294	ABCA5	Q8WWZ7	1642 aa		32.49	■■■□□ 2.79
AP000347.1-209	ENST00000437294	SYNJ1	O43426	1573 aa		32.49	■■■□□ 2.79
AP000347.1-209	ENST00000437294	CYB5RL	Q6IPT4	315 aa		32.47	■■■□□ 2.79
AP000347.1-209	ENST00000437294	ARAP1	Q96P48	1450 aa		32.47	■■■□□ 2.79
AP000347.1-209	ENST00000437294	BIVM-ERCC5	R4GMW8	1640 aa		32.43	■■■□□ 2.78
AP000347.1-209	ENST00000437294	TOP2B	Q02880	1626 aa		32.42	■■■□□ 2.78
AP000347.1-209	ENST00000437294	WRN	Q14191	1432 aa	Predicted RBP eCLIP	32.42	■■■□□ 2.78
AP000347.1-209	ENST00000437294	ADAMTS12	P58397	1594 aa		32.22	■■■□□ 2.75
AP000347.1-209	ENST00000437294	GRIN2A	Q12879	1464 aa		32.2	■■■□□ 2.75
AP000347.1-209	ENST00000437294	ERICH3	Q5RHP9	1530 aa		32.15	■■■□□ 2.74
AP000347.1-209	ENST00000437294	FHAD1	B1AJZ9	1412 aa		32.13	■■■□□ 2.73
AP000347.1-209	ENST00000437294	NUP160	Q12769	1436 aa		32.11	■■■□□ 2.73
AP000347.1-209	ENST00000437294	CEP170	Q5SW79	1584 aa		32.08	■■■□□ 2.73
AP000347.1-209	ENST00000437294	TRH	P20396	242 aa	Predicted RBP	32.04	■■■□□ 2.72
AP000347.1-209	ENST00000437294	SHROOM2	Q13796	1616 aa		31.97	■■■□□ 2.71
AP000347.1-209	ENST00000437294	ERCC6L2	Q5T890	1561 aa		31.95	■■■□□ 2.71
AP000347.1-209	ENST00000437294	KIF27	Q86VH2	1401 aa		31.76	■■■□□ 2.68
AP000347.1-209	ENST00000437294	RUSC2	Q8N2Y8	1516 aa		31.76	■■■□□ 2.68
AP000347.1-209	ENST00000437294	PRG4	Q92954	1404 aa	Predicted RBP	31.75	■■■□□ 2.67
AP000347.1-209	ENST00000437294	JPH4	Q96JJ6	628 aa		31.74	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 230.9 ms