Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC12.02□□□□□ -0.498e-7■■□□□ 12.2
SRSF1Q07955 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.93□□□□□ -0.58e-7■■□□□ 12.2
SRSF1Q07955 POFUT2-202ENST00000334538 3077 ntTSL 1 (best)10.06□□□□□ -0.88e-7■■□□□ 12.2
SRSF1Q07955 BHLHE40-201ENST00000256495 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.848e-7■■□□□ 12.2
SRSF1Q07955 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.858e-7■■□□□ 12.2
SRSF1Q07955 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC9.6□□□□□ -0.878e-7■■□□□ 12.2
SRSF1Q07955 POFUT2-208ENST00000471540 3176 ntTSL 59.53□□□□□ -0.888e-7■■□□□ 12.2
SRSF1Q07955 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC9.2□□□□□ -0.948e-7■■□□□ 12.2
SRSF1Q07955 RAB18-203ENST00000423465 873 ntTSL 55.37□□□□□ -1.558e-7■■□□□ 12.2
SRSF1Q07955 CAMTA1-202ENST00000461311 431 ntTSL 23.46□□□□□ -1.868e-7■■□□□ 12.2
SRSF1Q07955 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.39■□□□□ 0.852e-8■■□□□ 12.2
SRSF1Q07955 DCAF8-207ENST00000447377 728 ntTSL 218■□□□□ 0.472e-8■■□□□ 12.2
SRSF1Q07955 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.67□□□□□ -0.062e-8■■□□□ 12.2
SRSF1Q07955 DCAF8-208ENST00000461888 2277 ntTSL 513.27□□□□□ -0.292e-8■■□□□ 12.2
SRSF1Q07955 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.72e-8■■□□□ 12.2
SRSF1Q07955 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.812e-8■■□□□ 12.2
SRSF1Q07955 DCAF8-204ENST00000407642 517 ntTSL 29.72□□□□□ -0.852e-8■■□□□ 12.2
SRSF1Q07955 AL139011.2-202ENST00000485079 914 ntTSL 38.92□□□□□ -0.982e-8■■□□□ 12.2
SRSF1Q07955 DCAF8-202ENST00000368073 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.052e-8■■□□□ 12.2
SRSF1Q07955 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.32e-8■■□□□ 12.2
SRSF1Q07955 DCAF8-206ENST00000440682 501 ntTSL 36.68□□□□□ -1.342e-8■■□□□ 12.2
SRSF1Q07955 ARID4B-208ENST00000466653 2315 ntTSL 213.13□□□□□ -0.312e-8■■□□□ 12.2
SRSF1Q07955 SRRM2-228ENST00000576878 1141 ntTSL 215.78■□□□□ 0.123e-8■■□□□ 12.2
SRSF1Q07955 CDR2-202ENST00000561630 711 ntTSL 522.36■■□□□ 1.176e-7■■□□□ 12.2
SRSF1Q07955 POLRMT-208ENST00000592863 966 ntTSL 519.63■□□□□ 0.736e-7■■□□□ 12.2
SRSF1Q07955 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.286e-7■■□□□ 12.2
SRSF1Q07955 NADSYN1-217ENST00000530534 844 ntTSL 216.52■□□□□ 0.245e-10■■□□□ 12.2
SRSF1Q07955 CDR2-207ENST00000569045 826 ntTSL 515.87■□□□□ 0.136e-7■■□□□ 12.2
SRSF1Q07955 RFC5-202ENST00000420967 559 ntTSL 315.71■□□□□ 0.116e-7■■□□□ 12.2
SRSF1Q07955 CDR2-206ENST00000567406 567 ntTSL 414.88□□□□□ -0.036e-7■■□□□ 12.2
SRSF1Q07955 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.136e-7■■□□□ 12.2
SRSF1Q07955 CDR2-204ENST00000564542 1056 ntTSL 514.04□□□□□ -0.166e-7■■□□□ 12.2
SRSF1Q07955 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.267e-10■■□□□ 12.2
SRSF1Q07955 NADSYN1-215ENST00000529840 820 ntTSL 513.28□□□□□ -0.287e-10■■□□□ 12.2
SRSF1Q07955 RFC5-207ENST00000535092 574 ntTSL 412.25□□□□□ -0.456e-7■■□□□ 12.2
SRSF1Q07955 RFC5-206ENST00000484086 631 ntTSL 412.25□□□□□ -0.456e-7■■□□□ 12.2
SRSF1Q07955 RFC5-208ENST00000537315 820 ntTSL 411.4□□□□□ -0.586e-7■■□□□ 12.2
SRSF1Q07955 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.66e-7■■□□□ 12.2
SRSF1Q07955 NADSYN1-210ENST00000527852 582 ntTSL 510.82□□□□□ -0.687e-10■■□□□ 12.2
SRSF1Q07955 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.736e-7■■□□□ 12.2
SRSF1Q07955 RFC5-201ENST00000392542 2449 ntTSL 2 BASIC9.29□□□□□ -0.926e-7■■□□□ 12.2
SRSF1Q07955 MIR6848-201ENST00000611213 70 ntBASIC9.22□□□□□ -0.938e-9■■□□□ 12.2
SRSF1Q07955 RAPGEF6-209ENST00000510071 3107 ntTSL 1 (best) BASIC8.69□□□□□ -1.026e-7■■□□□ 12.2
SRSF1Q07955 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.116e-7■■□□□ 12.2
SRSF1Q07955 RAPGEF6-214ENST00000515170 4103 ntTSL 27.61□□□□□ -1.196e-7■■□□□ 12.2
SRSF1Q07955 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC7.45□□□□□ -1.227e-10■■□□□ 12.2
SRSF1Q07955 NADSYN1-204ENST00000525200 3616 ntTSL 27.27□□□□□ -1.257e-10■■□□□ 12.2
SRSF1Q07955 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.266e-7■■□□□ 12.2
SRSF1Q07955 RFC5-203ENST00000449641 572 ntTSL 45.97□□□□□ -1.456e-7■■□□□ 12.2
SRSF1Q07955 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.466e-7■■□□□ 12.2
SRSF1Q07955 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.596e-7■■□□□ 12.2
SRSF1Q07955 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.76e-7■■□□□ 12.2
SRSF1Q07955 CDR2-203ENST00000563573 556 ntTSL 43.94□□□□□ -1.786e-7■■□□□ 12.2
SRSF1Q07955 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.846e-7■■□□□ 12.2
SRSF1Q07955 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.7□□□□□ -1.986e-7■■□□□ 12.2
SRSF1Q07955 CABIN1-206ENST00000454754 1321 ntTSL 1 (best)19.17■□□□□ 0.662e-8■■□□□ 12.2
SRSF1Q07955 CABIN1-205ENST00000445422 1472 ntTSL 217.77■□□□□ 0.442e-8■■□□□ 12.2
SRSF1Q07955 FAM102A-201ENST00000300434 3148 ntTSL 1 (best)11.2□□□□□ -0.622e-10■■□□□ 12.2
SRSF1Q07955 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC9.9□□□□□ -0.822e-10■■□□□ 12.2
SRSF1Q07955 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.872e-10■■□□□ 12.2
SRSF1Q07955 FAM102A-204ENST00000465821 4316 ntTSL 29.46□□□□□ -0.92e-10■■□□□ 12.2
SRSF1Q07955 SNHG3-203ENST00000447507 185 ntTSL 1 (best)1.42□□□□□ -2.183e-23■■□□□ 12.1
SRSF1Q07955 WSB1-209ENST00000581185 1900 ntTSL 2 BASIC8.31□□□□□ -1.081e-8■■□□□ 12.1
SRSF1Q07955 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.761e-6■■□□□ 12.1
SRSF1Q07955 FUBP1-201ENST00000294623 2201 ntTSL 1 (best)11.54□□□□□ -0.563e-6■■□□□ 12.1
SRSF1Q07955 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.573e-6■■□□□ 12.1
SRSF1Q07955 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC10.46□□□□□ -0.743e-6■■□□□ 12.1
SRSF1Q07955 CDK5RAP3-221ENST00000581662 557 ntTSL 29.01□□□□□ -0.971e-8■■□□□ 12.1
SRSF1Q07955 LDLR-213ENST00000560502 509 ntTSL 213.78□□□□□ -0.22e-6■■□□□ 12.1
SRSF1Q07955 DDX39A-207ENST00000588542 1297 ntTSL 318.46■□□□□ 0.551e-6■■□□□ 12.1
SRSF1Q07955 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.161e-6■■□□□ 12.1
SRSF1Q07955 DDX39A-209ENST00000589318 1903 ntTSL 1 (best)12.57□□□□□ -0.41e-6■■□□□ 12.1
SRSF1Q07955 DDX39A-202ENST00000324340 1355 ntTSL 1 (best)10.75□□□□□ -0.691e-6■■□□□ 12.1
SRSF1Q07955 DDX39A-203ENST00000454233 922 ntTSL 3 BASIC10.08□□□□□ -0.81e-6■■□□□ 12.1
SRSF1Q07955 RBM28-204ENST00000478061 932 ntTSL 311.54□□□□□ -0.562e-8■■□□□ 12.1
SRSF1Q07955 RBM28-202ENST00000415472 2251 ntTSL 2 BASIC8.75□□□□□ -1.012e-8■■□□□ 12.1
SRSF1Q07955 RBM28-206ENST00000487602 715 ntTSL 56.86□□□□□ -1.312e-8■■□□□ 12.1
SRSF1Q07955 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.462e-8■■□□□ 12.1
SRSF1Q07955 RBM28-207ENST00000488249 570 ntTSL 33.53□□□□□ -1.842e-8■■□□□ 12.1
SRSF1Q07955 PKP4-205ENST00000426248 4134 ntTSL 1 (best)12.33□□□□□ -0.445e-8■■□□□ 12.1
SRSF1Q07955 PKP4-206ENST00000452162 2359 ntTSL 1 (best)9.3□□□□□ -0.925e-8■■□□□ 12.1
SRSF1Q07955 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.095e-8■■□□□ 12.1
SRSF1Q07955 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.275e-8■■□□□ 12.1
SRSF1Q07955 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC5.77□□□□□ -1.495e-8■■□□□ 12.1
SRSF1Q07955 AARS-202ENST00000564359 590 ntTSL 39.62□□□□□ -0.878e-10■■□□□ 12.1
SRSF1Q07955 ITPA-207ENST00000472295 670 ntTSL 214.75□□□□□ -0.053e-13■■□□□ 12.1
SRSF1Q07955 ITPA-206ENST00000461029 378 ntTSL 514.61□□□□□ -0.073e-13■■□□□ 12.1
SRSF1Q07955 EPS8L2-217ENST00000530452 704 ntTSL 318.09■□□□□ 0.493e-7■■□□□ 12.1
SRSF1Q07955 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.173e-7■■□□□ 12.1
SRSF1Q07955 EPS8L2-212ENST00000528770 2233 ntTSL 213.89□□□□□ -0.193e-7■■□□□ 12.1
SRSF1Q07955 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.443e-7■■□□□ 12.1
SRSF1Q07955 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.443e-7■■□□□ 12.1
SRSF1Q07955 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.453e-7■■□□□ 12.1
SRSF1Q07955 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.513e-7■■□□□ 12.1
SRSF1Q07955 EPS8L2-208ENST00000526909 3844 ntTSL 59.53□□□□□ -0.883e-7■■□□□ 12.1
SRSF1Q07955 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.335e-7■■□□□ 12.1
SRSF1Q07955 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.21■■□□□ 1.315e-7■■□□□ 12.1
SRSF1Q07955 SRSF11-211ENST00000473950 796 ntTSL 522.44■■□□□ 1.182e-10■■□□□ 12.1
SRSF1Q07955 BTBD19-204ENST00000464114 505 ntTSL 322.26■■□□□ 1.155e-7■■□□□ 12.1
SRSF1Q07955 BTBD19-208ENST00000489976 539 ntTSL 219.77■□□□□ 0.765e-7■■□□□ 12.1
Retrieved 100 of 14,836 protein–RNA pairs in 85.6 ms