RNA–Protein interactions for RNA: ENST00000535092.1

RFC5-207, Transcript of replication factor C subunit 5, humanhuman

TSL 4

Gene RFC5, Length 574 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-207ENST00000535092 NISCHQ9Y2I1 1504 aa31.78■■■□□ 2.68
RFC5-207ENST00000535092 CCDC180Q9P1Z9 1646 aa28.51■■■□□ 2.15
RFC5-207ENST00000535092 ABCC9O60706 1549 aa28.35■■■□□ 2.13
RFC5-207ENST00000535092 RB1CC1Q8TDY2 1594 aa26.98■■□□□ 1.91
RFC5-207ENST00000535092 NACADO15069 1562 aa26.84■■□□□ 1.89
RFC5-207ENST00000535092 UNC13AQ9UPW8 1703 aa26.62■■□□□ 1.85
RFC5-207ENST00000535092 DNAJC5BQ9UF47 199 aa26.59■■□□□ 1.85
RFC5-207ENST00000535092 MYO15BQ96JP2 1530 aa26.53■■□□□ 1.84
RFC5-207ENST00000535092 DCAF8L2P0C7V8 631 aa26.48■■□□□ 1.83
RFC5-207ENST00000535092 ZCCHC6Q5VYS8 1495 aaKnown RBP26.41■■□□□ 1.82
RFC5-207ENST00000535092 BICRAQ9NZM4 1560 aa26.41■■□□□ 1.82
RFC5-207ENST00000535092 PABPN1Q86U42 306 aaKnown RBP eCLIP26.34■■□□□ 1.81
RFC5-207ENST00000535092 DCAF1Q9Y4B6 1507 aa26.24■■□□□ 1.79
RFC5-207ENST00000535092 SCRIBQ14160 1630 aa25.97■■□□□ 1.75
RFC5-207ENST00000535092 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
RFC5-207ENST00000535092 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
RFC5-207ENST00000535092 EIF4G1Q04637 1599 aaKnown RBP25.63■■□□□ 1.69
RFC5-207ENST00000535092 CECR2Q9BXF3 1484 aa25.49■■□□□ 1.67
RFC5-207ENST00000535092 SMARCA4P51532 1647 aa24.8■■□□□ 1.56
RFC5-207ENST00000535092 NCAPD3P42695 1498 aa24.79■■□□□ 1.56
RFC5-207ENST00000535092 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
RFC5-207ENST00000535092 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
RFC5-207ENST00000535092 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
RFC5-207ENST00000535092 BAZ1AQ9NRL2 1556 aaPredicted RBP24.6■■□□□ 1.53
RFC5-207ENST00000535092 PEG3Q9GZU2 1588 aa24.58■■□□□ 1.52
RFC5-207ENST00000535092 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
RFC5-207ENST00000535092 NESP48681 1621 aa24.46■■□□□ 1.51
RFC5-207ENST00000535092 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.51
RFC5-207ENST00000535092 CUX2O14529 1486 aa24.34■■□□□ 1.49
RFC5-207ENST00000535092 ERCC6Q03468 1493 aa24.33■■□□□ 1.49
RFC5-207ENST00000535092 WIZO95785 1651 aa24.26■■□□□ 1.47
RFC5-207ENST00000535092 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
RFC5-207ENST00000535092 LAMC3Q9Y6N6 1575 aa24.21■■□□□ 1.47
RFC5-207ENST00000535092 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
RFC5-207ENST00000535092 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
RFC5-207ENST00000535092 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
RFC5-207ENST00000535092 CADPSQ9ULU8 1353 aa23.99■■□□□ 1.43
RFC5-207ENST00000535092 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.42
RFC5-207ENST00000535092 TOP2AP11388 1531 aaKnown RBP23.9■■□□□ 1.42
RFC5-207ENST00000535092 WDR62O43379 1518 aa23.86■■□□□ 1.41
RFC5-207ENST00000535092 MRC2Q9UBG0 1479 aa23.85■■□□□ 1.41
RFC5-207ENST00000535092 CFTRP13569 1480 aa23.81■■□□□ 1.4
RFC5-207ENST00000535092 FANCD2Q9BXW9 1451 aa23.75■■□□□ 1.39
RFC5-207ENST00000535092 CEP164Q9UPV0 1460 aa23.74■■□□□ 1.39
RFC5-207ENST00000535092 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
RFC5-207ENST00000535092 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
RFC5-207ENST00000535092 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
RFC5-207ENST00000535092 TOPBP1Q92547 1522 aa23.36■■□□□ 1.33
RFC5-207ENST00000535092 ZNF608Q9ULD9 1512 aaPredicted RBP23.33■■□□□ 1.33
RFC5-207ENST00000535092 DNMBPQ6XZF7 1577 aa23.28■■□□□ 1.32
RFC5-207ENST00000535092 IFT140Q96RY7 1462 aa23.25■■□□□ 1.31
RFC5-207ENST00000535092 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
RFC5-207ENST00000535092 EIF4G3O43432 1585 aaKnown RBP23.22■■□□□ 1.31
RFC5-207ENST00000535092 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
RFC5-207ENST00000535092 POLA1P09884 1462 aaPredicted RBP23.13■■□□□ 1.29
RFC5-207ENST00000535092 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
RFC5-207ENST00000535092 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
RFC5-207ENST00000535092 AQRO60306 1485 aaKnown RBP eCLIP23.06■■□□□ 1.282e-8■■■□□ 16.5
RFC5-207ENST00000535092 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
RFC5-207ENST00000535092 CHD1O14646 1710 aa23.05■■□□□ 1.28
RFC5-207ENST00000535092 CUX1P39880 1505 aa23.05■■□□□ 1.28
RFC5-207ENST00000535092 RIMBP3CA6NJZ7 1639 aa23.04■■□□□ 1.28
RFC5-207ENST00000535092 RIMBP3BA6NNM3 1639 aa23.04■■□□□ 1.28
RFC5-207ENST00000535092 RIMBP3Q9UFD9 1639 aa23.04■■□□□ 1.28
RFC5-207ENST00000535092 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
RFC5-207ENST00000535092 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
RFC5-207ENST00000535092 ARHGEF11O15085 1522 aa22.94■■□□□ 1.26
RFC5-207ENST00000535092 SOGA1O94964 1423 aa22.91■■□□□ 1.26
RFC5-207ENST00000535092 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.26
RFC5-207ENST00000535092 SNAPC4Q5SXM2 1469 aa22.85■■□□□ 1.25
RFC5-207ENST00000535092 SUPT5HO00267 1087 aaKnown RBP22.83■■□□□ 1.25
RFC5-207ENST00000535092 CLASP1Q7Z460 1538 aa22.79■■□□□ 1.24
RFC5-207ENST00000535092 PBRM1Q86U86 1689 aa22.79■■□□□ 1.24
RFC5-207ENST00000535092 ABCA5Q8WWZ7 1642 aa22.77■■□□□ 1.24
RFC5-207ENST00000535092 ARAP1Q96P48 1450 aa22.77■■□□□ 1.24
RFC5-207ENST00000535092 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
RFC5-207ENST00000535092 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
RFC5-207ENST00000535092 ABCA10Q8WWZ4 1543 aa22.73■■□□□ 1.23
RFC5-207ENST00000535092 BIVM-ERCC5R4GMW8 1640 aa22.71■■□□□ 1.23
RFC5-207ENST00000535092 SYNJ1O43426 1573 aa22.71■■□□□ 1.23
RFC5-207ENST00000535092 FBLN2P98095 1184 aa22.69■■□□□ 1.22
RFC5-207ENST00000535092 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
RFC5-207ENST00000535092 TOP2BQ02880 1626 aa22.67■■□□□ 1.22
RFC5-207ENST00000535092 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
RFC5-207ENST00000535092 CYB5RLQ6IPT4 315 aa22.59■■□□□ 1.21
RFC5-207ENST00000535092 ADAMTS12P58397 1594 aa22.57■■□□□ 1.2
RFC5-207ENST00000535092 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
RFC5-207ENST00000535092 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
RFC5-207ENST00000535092 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
RFC5-207ENST00000535092 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
RFC5-207ENST00000535092 GRIN2AQ12879 1464 aa22.49■■□□□ 1.19
RFC5-207ENST00000535092 NUP160Q12769 1436 aa22.44■■□□□ 1.18
RFC5-207ENST00000535092 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
RFC5-207ENST00000535092 SHROOM2Q13796 1616 aa22.41■■□□□ 1.18
RFC5-207ENST00000535092 FHAD1B1AJZ9 1412 aa22.37■■□□□ 1.17
RFC5-207ENST00000535092 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
RFC5-207ENST00000535092 TRHP20396 242 aaPredicted RBP22.21■■□□□ 1.15
RFC5-207ENST00000535092 IGF1RP08069 1367 aa22.14■■□□□ 1.14
RFC5-207ENST00000535092 PRG4Q92954 1404 aaPredicted RBP22.14■■□□□ 1.13
RFC5-207ENST00000535092 CUL7Q14999 1698 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms