RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 NISCHQ9Y2I1 1504 aa26.81■■□□□ 1.88
FUBP1-201ENST00000294623 HRCP23327 699 aa24.06■■□□□ 1.44
FUBP1-201ENST00000294623 PELP1Q8IZL8 1130 aaKnown RBP23.88■■□□□ 1.41
FUBP1-201ENST00000294623 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
FUBP1-201ENST00000294623 MYT1Q01538 1121 aa23.2■■□□□ 1.3
FUBP1-201ENST00000294623 MYO15BQ96JP2 1530 aa23.16■■□□□ 1.3
FUBP1-201ENST00000294623 PCGF6Q9BYE7 350 aa23.14■■□□□ 1.3
FUBP1-201ENST00000294623 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.28
FUBP1-201ENST00000294623 SUPT5HO00267 1087 aaKnown RBP23.06■■□□□ 1.28
FUBP1-201ENST00000294623 CCDC180Q9P1Z9 1646 aa23.04■■□□□ 1.28
FUBP1-201ENST00000294623 SHROOM4Q9ULL8 1493 aa23.03■■□□□ 1.28
FUBP1-201ENST00000294623 PPARGC1BQ86YN6 1023 aaKnown RBP22.99■■□□□ 1.27
FUBP1-201ENST00000294623 ZEB1P37275 1124 aaPredicted RBP22.94■■□□□ 1.26
FUBP1-201ENST00000294623 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
FUBP1-201ENST00000294623 TRIM26Q12899 539 aaPredicted RBP22.78■■□□□ 1.24
FUBP1-201ENST00000294623 SCAF1Q9H7N4 1312 aaKnown RBP22.59■■□□□ 1.21
FUBP1-201ENST00000294623 ACIN1Q9UKV3 1341 aaKnown RBP22.22■■□□□ 1.15
FUBP1-201ENST00000294623 LOC105371045A0A1W2PR82 267 aa22.19■■□□□ 1.14
FUBP1-201ENST00000294623 CENPBP07199 599 aaPredicted RBP22.09■■□□□ 1.13
FUBP1-201ENST00000294623 NEUROD1Q13562 356 aa21.91■■□□□ 1.1
FUBP1-201ENST00000294623 TTBK1Q5TCY1 1321 aaPredicted RBP21.9■■□□□ 1.1
FUBP1-201ENST00000294623 ABCC9O60706 1549 aa21.84■■□□□ 1.09
FUBP1-201ENST00000294623 GTF3C3Q9Y5Q9 886 aa21.84■■□□□ 1.09
FUBP1-201ENST00000294623 DIEXFQ68CQ4 756 aaKnown RBP21.69■■□□□ 1.06
FUBP1-201ENST00000294623 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
FUBP1-201ENST00000294623 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
FUBP1-201ENST00000294623 CCER1Q8TC90 406 aaPredicted RBP21.54■■□□□ 1.04
FUBP1-201ENST00000294623 CLSPNQ9HAW4 1339 aa21.53■■□□□ 1.04
FUBP1-201ENST00000294623 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
FUBP1-201ENST00000294623 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
FUBP1-201ENST00000294623 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.01
FUBP1-201ENST00000294623 ZNF316A6NFI3 1004 aaPredicted RBP21.37■■□□□ 1.01
FUBP1-201ENST00000294623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.37■■□□□ 1.01
FUBP1-201ENST00000294623 FAM9AQ8IZU1 332 aaPredicted RBP21.19■□□□□ 0.98
FUBP1-201ENST00000294623 ANP32EQ9BTT0 268 aa21.08■□□□□ 0.96
FUBP1-201ENST00000294623 EIF4G1Q04637 1599 aaKnown RBP21.03■□□□□ 0.96
FUBP1-201ENST00000294623 MIER1Q8N108 512 aa20.98■□□□□ 0.95
FUBP1-201ENST00000294623 YTHDC1Q96MU7 727 aaKnown RBP20.97■□□□□ 0.95
FUBP1-201ENST00000294623 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
FUBP1-201ENST00000294623 TNIKQ9UKE5 1360 aa20.96■□□□□ 0.95
FUBP1-201ENST00000294623 BCL11AQ9H165 835 aa20.95■□□□□ 0.94
FUBP1-201ENST00000294623 EEA1Q15075 1411 aa20.94■□□□□ 0.94
FUBP1-201ENST00000294623 CEP162Q5TB80 1403 aa20.94■□□□□ 0.94
FUBP1-201ENST00000294623 BAZ1AQ9NRL2 1556 aaPredicted RBP20.88■□□□□ 0.93
FUBP1-201ENST00000294623 SUPT16HQ9Y5B9 1047 aaKnown RBP20.88■□□□□ 0.93
FUBP1-201ENST00000294623 TSHZ2Q9NRE2 1034 aa20.81■□□□□ 0.92
FUBP1-201ENST00000294623 MROH2BQ7Z745 1585 aa20.75■□□□□ 0.91
FUBP1-201ENST00000294623 EHMT2Q96KQ7 1210 aa20.75■□□□□ 0.91
FUBP1-201ENST00000294623 WIZO95785 1651 aa20.7■□□□□ 0.9
FUBP1-201ENST00000294623 GOLGA3Q08378 1498 aa20.69■□□□□ 0.9
FUBP1-201ENST00000294623 CECR2Q9BXF3 1484 aa20.63■□□□□ 0.89
FUBP1-201ENST00000294623 NACADO15069 1562 aa20.62■□□□□ 0.89
FUBP1-201ENST00000294623 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.89
FUBP1-201ENST00000294623 CSRNP3Q8WYN3 585 aa20.58■□□□□ 0.88
FUBP1-201ENST00000294623 CCDC88BA6NC98 1476 aa20.57■□□□□ 0.88
FUBP1-201ENST00000294623 KIF21BO75037 1637 aa20.55■□□□□ 0.88
FUBP1-201ENST00000294623 ABCC8Q09428 1581 aa20.52■□□□□ 0.88
FUBP1-201ENST00000294623 MYT1LQ9UL68 1186 aa20.49■□□□□ 0.87
FUBP1-201ENST00000294623 VPS8Q8N3P4 1428 aa20.49■□□□□ 0.87
FUBP1-201ENST00000294623 CEP164Q9UPV0 1460 aa20.49■□□□□ 0.87
FUBP1-201ENST00000294623 BAZ1BQ9UIG0 1483 aaKnown RBP20.47■□□□□ 0.87
FUBP1-201ENST00000294623 SOGA1O94964 1423 aa20.45■□□□□ 0.86
FUBP1-201ENST00000294623 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
FUBP1-201ENST00000294623 DHX57Q6P158 1386 aaKnown RBP20.4■□□□□ 0.86
FUBP1-201ENST00000294623 UBTFP17480 764 aaKnown RBP20.39■□□□□ 0.86
FUBP1-201ENST00000294623 HNRNPUL2Q1KMD3 747 aaKnown RBP20.39■□□□□ 0.86
FUBP1-201ENST00000294623 CLIP1P30622 1438 aa20.37■□□□□ 0.85
FUBP1-201ENST00000294623 CUX2O14529 1486 aa20.35■□□□□ 0.85
FUBP1-201ENST00000294623 APLP2Q06481 763 aa20.32■□□□□ 0.84
FUBP1-201ENST00000294623 RBM19Q9Y4C8 960 aaKnown RBP20.31■□□□□ 0.84
FUBP1-201ENST00000294623 NEFLP07196 543 aa20.3■□□□□ 0.84
FUBP1-201ENST00000294623 FANCIQ9NVI1 1328 aa20.28■□□□□ 0.84
FUBP1-201ENST00000294623 ERICH6Q7L0X2 663 aa20.26■□□□□ 0.83
FUBP1-201ENST00000294623 SMARCA4P51532 1647 aa20.26■□□□□ 0.83
FUBP1-201ENST00000294623 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
FUBP1-201ENST00000294623 FKBP8Q14318 412 aa20.21■□□□□ 0.83
FUBP1-201ENST00000294623 RRBP1Q9P2E9 1410 aaKnown RBP20.19■□□□□ 0.82
FUBP1-201ENST00000294623 CCER2I3L3R5 266 aa20.15■□□□□ 0.82
FUBP1-201ENST00000294623 PRKCSHP14314 528 aaPredicted RBP20.12■□□□□ 0.81
FUBP1-201ENST00000294623 ERICH6BQ5W0A0 696 aa20.08■□□□□ 0.81
FUBP1-201ENST00000294623 ERICH3Q5RHP9 1530 aa20.08■□□□□ 0.8
FUBP1-201ENST00000294623 BCANQ96GW7 911 aa20.05■□□□□ 0.8
FUBP1-201ENST00000294623 TIMELESSQ9UNS1 1208 aa20.05■□□□□ 0.8
FUBP1-201ENST00000294623 MSH5O43196 834 aa20.03■□□□□ 0.8
FUBP1-201ENST00000294623 SYNJ1O43426 1573 aa20.02■□□□□ 0.8
FUBP1-201ENST00000294623 CDK11AQ9UQ88 783 aaPredicted RBP19.99■□□□□ 0.79
FUBP1-201ENST00000294623 RAPGEF2Q9Y4G8 1499 aa19.98■□□□□ 0.79
FUBP1-201ENST00000294623 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
FUBP1-201ENST00000294623 MAPKBP1O60336 1514 aa19.96■□□□□ 0.79
FUBP1-201ENST00000294623 ARAP1Q96P48 1450 aa19.94■□□□□ 0.78
FUBP1-201ENST00000294623 CCNB3Q8WWL7 1395 aa19.94■□□□□ 0.78
FUBP1-201ENST00000294623 PPP1R15AO75807 674 aaPredicted RBP19.92■□□□□ 0.78
FUBP1-201ENST00000294623 KCNH8Q96L42 1107 aa19.9■□□□□ 0.78
FUBP1-201ENST00000294623 MAP3K1Q13233 1512 aa19.9■□□□□ 0.78
FUBP1-201ENST00000294623 ANP32CO43423 234 aa19.88■□□□□ 0.77
FUBP1-201ENST00000294623 PRXQ9BXM0 1461 aa19.84■□□□□ 0.77
FUBP1-201ENST00000294623 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
FUBP1-201ENST00000294623 DEKP35659 375 aaKnown RBP19.84■□□□□ 0.77
FUBP1-201ENST00000294623 WDR97A6NE52 1622 aa19.83■□□□□ 0.77
FUBP1-201ENST00000294623 RAB3GAP2Q9H2M9 1393 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 969.7 ms